RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.03
CLSTN1-203ENST00000435891 TOPBP1Q92547 1522 aa15.26■□□□□ 0.03
CLSTN1-203ENST00000435891 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
CLSTN1-203ENST00000435891 LRRC9Q6ZRR7 1453 aa15.25■□□□□ 0.03
CLSTN1-203ENST00000435891 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
CLSTN1-203ENST00000435891 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
CLSTN1-203ENST00000435891 RAB3GAP2Q9H2M9 1393 aa15.23■□□□□ 0.03
CLSTN1-203ENST00000435891 FHOD3Q2V2M9 1422 aa15.23■□□□□ 0.03
CLSTN1-203ENST00000435891 ABCA10Q8WWZ4 1543 aa15.23■□□□□ 0.03
CLSTN1-203ENST00000435891 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
CLSTN1-203ENST00000435891 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
CLSTN1-203ENST00000435891 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
CLSTN1-203ENST00000435891 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
CLSTN1-203ENST00000435891 FAM50AQ14320 339 aaKnown RBP15.19■□□□□ 0.02
CLSTN1-203ENST00000435891 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
CLSTN1-203ENST00000435891 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
CLSTN1-203ENST00000435891 CFAP43Q8NDM7 1665 aa15.15■□□□□ 0.02
CLSTN1-203ENST00000435891 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
CLSTN1-203ENST00000435891 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
CLSTN1-203ENST00000435891 SETD5Q9C0A6 1442 aa15.14■□□□□ 0.01
CLSTN1-203ENST00000435891 SIN3AQ96ST3 1273 aa15.11■□□□□ 0.01
CLSTN1-203ENST00000435891 CUL7Q14999 1698 aa15.1■□□□□ 0.01
CLSTN1-203ENST00000435891 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
CLSTN1-203ENST00000435891 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
CLSTN1-203ENST00000435891 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
CLSTN1-203ENST00000435891 CTTNBP2Q8WZ74 1663 aa15.08■□□□□ 0.01
CLSTN1-203ENST00000435891 WDR97A6NE52 1622 aa15.08■□□□□ 0
CLSTN1-203ENST00000435891 LAMC3Q9Y6N6 1575 aa15.08■□□□□ 0
CLSTN1-203ENST00000435891 SNAPC4Q5SXM2 1469 aa15.05■□□□□ 0
CLSTN1-203ENST00000435891 AQRO60306 1485 aaKnown RBP eCLIP15.05■□□□□ -07e-7■■■■■ 41.4
CLSTN1-203ENST00000435891 GAPVD1Q14C86 1478 aa15.04■□□□□ -0
CLSTN1-203ENST00000435891 ABCA5Q8WWZ7 1642 aa15.04■□□□□ -0
CLSTN1-203ENST00000435891 FMN1Q68DA7 1419 aa15.02■□□□□ -0
CLSTN1-203ENST00000435891 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
CLSTN1-203ENST00000435891 FGD6Q6ZV73 1430 aa15□□□□□ -0.01
CLSTN1-203ENST00000435891 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
CLSTN1-203ENST00000435891 KCNH8Q96L42 1107 aa15□□□□□ -0.01
CLSTN1-203ENST00000435891 KIF21AQ7Z4S6 1674 aa14.99□□□□□ -0.01
CLSTN1-203ENST00000435891 MTUS2Q5JR59 1369 aa14.99□□□□□ -0.01
CLSTN1-203ENST00000435891 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
CLSTN1-203ENST00000435891 SAMD9Q5K651 1589 aa14.98□□□□□ -0.01
CLSTN1-203ENST00000435891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.97□□□□□ -0.01
CLSTN1-203ENST00000435891 HIRIP3Q9BW71 556 aaPredicted RBP14.96□□□□□ -0.01
CLSTN1-203ENST00000435891 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
CLSTN1-203ENST00000435891 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
CLSTN1-203ENST00000435891 NCOA2Q15596 1464 aa14.93□□□□□ -0.02
CLSTN1-203ENST00000435891 DDX10Q13206 875 aaKnown RBP14.93□□□□□ -0.02
CLSTN1-203ENST00000435891 CCDC18Q5T9S5 1454 aa14.91□□□□□ -0.02
CLSTN1-203ENST00000435891 MAGI3Q5TCQ9 1506 aa14.91□□□□□ -0.02
CLSTN1-203ENST00000435891 PPP1R15AO75807 674 aaPredicted RBP14.91□□□□□ -0.02
CLSTN1-203ENST00000435891 MYOM3Q5VTT5 1437 aa14.9□□□□□ -0.02
CLSTN1-203ENST00000435891 HFM1A2PYH4 1435 aa14.89□□□□□ -0.03
CLSTN1-203ENST00000435891 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
CLSTN1-203ENST00000435891 NAIPQ13075 1403 aa14.87□□□□□ -0.03
CLSTN1-203ENST00000435891 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
CLSTN1-203ENST00000435891 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
CLSTN1-203ENST00000435891 SUPT6HQ7KZ85 1726 aaKnown RBP14.85□□□□□ -0.03
CLSTN1-203ENST00000435891 UACAQ9BZF9 1416 aa14.85□□□□□ -0.03
CLSTN1-203ENST00000435891 EHBP1L1Q8N3D4 1523 aa14.85□□□□□ -0.03
CLSTN1-203ENST00000435891 CHIC2Q9UKJ5 165 aa14.84□□□□□ -0.03
CLSTN1-203ENST00000435891 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
CLSTN1-203ENST00000435891 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
CLSTN1-203ENST00000435891 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
CLSTN1-203ENST00000435891 RRP7BPQ9NSQ0 103 aa14.84□□□□□ -0.03
CLSTN1-203ENST00000435891 SUPT16HQ9Y5B9 1047 aaKnown RBP14.83□□□□□ -0.04
CLSTN1-203ENST00000435891 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
CLSTN1-203ENST00000435891 TONSLQ96HA7 1378 aa14.82□□□□□ -0.04
CLSTN1-203ENST00000435891 CDK13Q14004 1512 aaKnown RBP14.81□□□□□ -0.04
CLSTN1-203ENST00000435891 IQGAP2Q13576 1575 aa14.81□□□□□ -0.04
CLSTN1-203ENST00000435891 ADAMTS12P58397 1594 aa14.8□□□□□ -0.04
CLSTN1-203ENST00000435891 ANP32EQ9BTT0 268 aa14.8□□□□□ -0.04
CLSTN1-203ENST00000435891 ZNF608Q9ULD9 1512 aaPredicted RBP14.8□□□□□ -0.04
CLSTN1-203ENST00000435891 EPRSP07814 1512 aaKnown RBP14.79□□□□□ -0.04
CLSTN1-203ENST00000435891 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
CLSTN1-203ENST00000435891 MRC2Q9UBG0 1479 aa14.78□□□□□ -0.04
CLSTN1-203ENST00000435891 DENND4BO75064 1496 aaPredicted RBP14.76□□□□□ -0.05
CLSTN1-203ENST00000435891 HECW1Q76N89 1606 aa14.76□□□□□ -0.05
CLSTN1-203ENST00000435891 KDM6BO15054 1643 aa14.76□□□□□ -0.05
CLSTN1-203ENST00000435891 KDM5BQ9UGL1 1544 aa14.76□□□□□ -0.05
CLSTN1-203ENST00000435891 TCOF1Q13428 1488 aaKnown RBP14.75□□□□□ -0.05
CLSTN1-203ENST00000435891 WDR62O43379 1518 aa14.74□□□□□ -0.05
CLSTN1-203ENST00000435891 TRIM52Q96A61 297 aa14.73□□□□□ -0.05
CLSTN1-203ENST00000435891 FOXD1Q16676 465 aa14.71□□□□□ -0.05
CLSTN1-203ENST00000435891 ZNF644Q9H582 1327 aaPredicted RBP14.69□□□□□ -0.06
CLSTN1-203ENST00000435891 DISP1Q96F81 1524 aa14.69□□□□□ -0.06
CLSTN1-203ENST00000435891 ANP32CO43423 234 aa14.69□□□□□ -0.06
CLSTN1-203ENST00000435891 GCC2Q8IWJ2 1684 aa14.69□□□□□ -0.06
CLSTN1-203ENST00000435891 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
CLSTN1-203ENST00000435891 MIA2Q96PC5 1412 aa14.68□□□□□ -0.06
CLSTN1-203ENST00000435891 MPHOSPH9Q99550 1183 aa14.67□□□□□ -0.06
CLSTN1-203ENST00000435891 NUP153P49790 1475 aaKnown RBP14.66□□□□□ -0.06
CLSTN1-203ENST00000435891 KIAA0586Q9BVV6 1533 aa14.66□□□□□ -0.06
CLSTN1-203ENST00000435891 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
CLSTN1-203ENST00000435891 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
CLSTN1-203ENST00000435891 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
CLSTN1-203ENST00000435891 BCANQ96GW7 911 aa14.64□□□□□ -0.07
CLSTN1-203ENST00000435891 HSPA5P11021 654 aaKnown RBP14.63□□□□□ -0.07
CLSTN1-203ENST00000435891 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
CLSTN1-203ENST00000435891 DAPK1P53355 1430 aa14.63□□□□□ -0.07
CLSTN1-203ENST00000435891 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms