RNA–Protein interactions for RNA: ENST00000435817.6

FCHSD1-201, Transcript of FCH and double SH3 domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCHSD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-201ENST00000435817 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
FCHSD1-201ENST00000435817 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
FCHSD1-201ENST00000435817 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
FCHSD1-201ENST00000435817 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
FCHSD1-201ENST00000435817 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
FCHSD1-201ENST00000435817 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
FCHSD1-201ENST00000435817 FAM9BQ8IZU0 186 aa16.83■□□□□ 0.29
FCHSD1-201ENST00000435817 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
FCHSD1-201ENST00000435817 PLEKHD1A6NEE1 506 aa16.82■□□□□ 0.28
FCHSD1-201ENST00000435817 SALL2Q9Y467 1007 aaPredicted RBP16.82■□□□□ 0.28
FCHSD1-201ENST00000435817 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
FCHSD1-201ENST00000435817 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
FCHSD1-201ENST00000435817 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
FCHSD1-201ENST00000435817 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
FCHSD1-201ENST00000435817 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
FCHSD1-201ENST00000435817 BCL11AQ9H165 835 aa16.8■□□□□ 0.28
FCHSD1-201ENST00000435817 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
FCHSD1-201ENST00000435817 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
FCHSD1-201ENST00000435817 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.27
FCHSD1-201ENST00000435817 FHOD3Q2V2M9 1422 aa16.76■□□□□ 0.27
FCHSD1-201ENST00000435817 CFDP1Q9UEE9 299 aaPredicted RBP16.76■□□□□ 0.27
FCHSD1-201ENST00000435817 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
FCHSD1-201ENST00000435817 CCNB3Q8WWL7 1395 aa16.75■□□□□ 0.27
FCHSD1-201ENST00000435817 NESP48681 1621 aa16.75■□□□□ 0.27
FCHSD1-201ENST00000435817 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
FCHSD1-201ENST00000435817 RGL3Q3MIN7 710 aa16.74■□□□□ 0.27
FCHSD1-201ENST00000435817 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
FCHSD1-201ENST00000435817 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
FCHSD1-201ENST00000435817 FKBP8Q14318 412 aa16.73■□□□□ 0.27
FCHSD1-201ENST00000435817 FOXD1Q16676 465 aa16.73■□□□□ 0.27
FCHSD1-201ENST00000435817 NCAPD3P42695 1498 aa16.71■□□□□ 0.26
FCHSD1-201ENST00000435817 IGF1RP08069 1367 aa16.7■□□□□ 0.26
FCHSD1-201ENST00000435817 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
FCHSD1-201ENST00000435817 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
FCHSD1-201ENST00000435817 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
FCHSD1-201ENST00000435817 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
FCHSD1-201ENST00000435817 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
FCHSD1-201ENST00000435817 MRS2Q9HD23 443 aa16.66■□□□□ 0.26
FCHSD1-201ENST00000435817 NEFMP07197 916 aa16.62■□□□□ 0.25
FCHSD1-201ENST00000435817 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
FCHSD1-201ENST00000435817 IRX6P78412 446 aaPredicted RBP16.58■□□□□ 0.25
FCHSD1-201ENST00000435817 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.25
FCHSD1-201ENST00000435817 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
FCHSD1-201ENST00000435817 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
FCHSD1-201ENST00000435817 CFTRP13569 1480 aa16.55■□□□□ 0.24
FCHSD1-201ENST00000435817 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.241e-6■■■■□ 24.9
FCHSD1-201ENST00000435817 CUX1P39880 1505 aa16.54■□□□□ 0.24
FCHSD1-201ENST00000435817 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
FCHSD1-201ENST00000435817 MYT1Q01538 1121 aa16.52■□□□□ 0.24
FCHSD1-201ENST00000435817 ARAP1Q96P48 1450 aa16.52■□□□□ 0.23
FCHSD1-201ENST00000435817 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
FCHSD1-201ENST00000435817 KIF21BO75037 1637 aa16.51■□□□□ 0.23
FCHSD1-201ENST00000435817 NPM2Q86SE8 214 aaKnown RBP16.49■□□□□ 0.23
FCHSD1-201ENST00000435817 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
FCHSD1-201ENST00000435817 SETD5Q9C0A6 1442 aa16.47■□□□□ 0.23
FCHSD1-201ENST00000435817 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
FCHSD1-201ENST00000435817 JPH4Q96JJ6 628 aa16.46■□□□□ 0.22
FCHSD1-201ENST00000435817 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
FCHSD1-201ENST00000435817 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
FCHSD1-201ENST00000435817 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
FCHSD1-201ENST00000435817 ZNF644Q9H582 1327 aaPredicted RBP16.43■□□□□ 0.22
FCHSD1-201ENST00000435817 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
FCHSD1-201ENST00000435817 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
FCHSD1-201ENST00000435817 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
FCHSD1-201ENST00000435817 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
FCHSD1-201ENST00000435817 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
FCHSD1-201ENST00000435817 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.21
FCHSD1-201ENST00000435817 DCAF11Q8TEB1 546 aa16.39■□□□□ 0.21
FCHSD1-201ENST00000435817 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
FCHSD1-201ENST00000435817 ARID4BQ4LE39 1312 aaPredicted RBP16.38■□□□□ 0.21
FCHSD1-201ENST00000435817 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
FCHSD1-201ENST00000435817 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
FCHSD1-201ENST00000435817 MPHOSPH9Q99550 1183 aa16.35■□□□□ 0.21
FCHSD1-201ENST00000435817 PKD2Q13563 968 aa16.35■□□□□ 0.21
FCHSD1-201ENST00000435817 ANP32AP39687 249 aaKnown RBP16.34■□□□□ 0.21
FCHSD1-201ENST00000435817 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
FCHSD1-201ENST00000435817 TOPBP1Q92547 1522 aa16.33■□□□□ 0.2
FCHSD1-201ENST00000435817 SUPT16HQ9Y5B9 1047 aaKnown RBP16.31■□□□□ 0.2
FCHSD1-201ENST00000435817 MLECQ14165 292 aa16.31■□□□□ 0.2
FCHSD1-201ENST00000435817 HSPA5P11021 654 aaKnown RBP16.31■□□□□ 0.2
FCHSD1-201ENST00000435817 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
FCHSD1-201ENST00000435817 GGT6Q6P531 493 aa16.3■□□□□ 0.2
FCHSD1-201ENST00000435817 L3MBTL2Q969R5 705 aa16.3■□□□□ 0.2
FCHSD1-201ENST00000435817 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
FCHSD1-201ENST00000435817 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
FCHSD1-201ENST00000435817 CARMIL2Q6F5E8 1435 aa16.28■□□□□ 0.2
FCHSD1-201ENST00000435817 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
FCHSD1-201ENST00000435817 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
FCHSD1-201ENST00000435817 C14orf37Q86TY3 774 aa16.27■□□□□ 0.2
FCHSD1-201ENST00000435817 ZBTB7CA1YPR0 619 aa16.25■□□□□ 0.19
FCHSD1-201ENST00000435817 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
FCHSD1-201ENST00000435817 TIMELESSQ9UNS1 1208 aa16.23■□□□□ 0.19
FCHSD1-201ENST00000435817 SAFB2Q14151 953 aaKnown RBP eCLIP16.23■□□□□ 0.19
FCHSD1-201ENST00000435817 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.23■□□□□ 0.19
FCHSD1-201ENST00000435817 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
FCHSD1-201ENST00000435817 NUP155O75694 1391 aa16.22■□□□□ 0.19
FCHSD1-201ENST00000435817 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
FCHSD1-201ENST00000435817 POGKQ9P215 609 aa16.2■□□□□ 0.18
FCHSD1-201ENST00000435817 EFCAB2Q5VUJ9 269 aa16.2■□□□□ 0.18
FCHSD1-201ENST00000435817 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms