RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 IQGAP2Q13576 1575 aa24.08■■□□□ 1.45
TMEM40-204ENST00000435218 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
TMEM40-204ENST00000435218 EFCAB5A4FU69 1503 aa24.06■■□□□ 1.44
TMEM40-204ENST00000435218 NUP160Q12769 1436 aa24.06■■□□□ 1.44
TMEM40-204ENST00000435218 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
TMEM40-204ENST00000435218 KIAA0586Q9BVV6 1533 aa24.04■■□□□ 1.44
TMEM40-204ENST00000435218 ARHGAP35Q9NRY4 1499 aa24.03■■□□□ 1.44
TMEM40-204ENST00000435218 SAMD9Q5K651 1589 aa24.03■■□□□ 1.44
TMEM40-204ENST00000435218 ARAP1Q96P48 1450 aa23.99■■□□□ 1.43
TMEM40-204ENST00000435218 UGGT2Q9NYU1 1516 aa23.97■■□□□ 1.43
TMEM40-204ENST00000435218 VPS8Q8N3P4 1428 aa23.94■■□□□ 1.42
TMEM40-204ENST00000435218 FBLN2P98095 1184 aa23.93■■□□□ 1.42
TMEM40-204ENST00000435218 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.41
TMEM40-204ENST00000435218 SHROOM2Q13796 1616 aa23.85■■□□□ 1.41
TMEM40-204ENST00000435218 KIAA0556O60303 1618 aa23.85■■□□□ 1.41
TMEM40-204ENST00000435218 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
TMEM40-204ENST00000435218 DISP1Q96F81 1524 aa23.82■■□□□ 1.4
TMEM40-204ENST00000435218 FHOD3Q2V2M9 1422 aa23.8■■□□□ 1.4
TMEM40-204ENST00000435218 FMN1Q68DA7 1419 aa23.77■■□□□ 1.4
TMEM40-204ENST00000435218 PCF11O94913 1555 aaKnown RBP23.74■■□□□ 1.39
TMEM40-204ENST00000435218 JPH4Q96JJ6 628 aa23.74■■□□□ 1.39
TMEM40-204ENST00000435218 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
TMEM40-204ENST00000435218 FYCO1Q9BQS8 1478 aa23.7■■□□□ 1.39
TMEM40-204ENST00000435218 P3H3Q8IVL6 736 aa23.69■■□□□ 1.38
TMEM40-204ENST00000435218 CASKIN1Q8WXD9 1431 aa23.68■■□□□ 1.38
TMEM40-204ENST00000435218 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
TMEM40-204ENST00000435218 CFAP43Q8NDM7 1665 aa23.65■■□□□ 1.38
TMEM40-204ENST00000435218 PRG4Q92954 1404 aaPredicted RBP23.64■■□□□ 1.37
TMEM40-204ENST00000435218 LRRIQ1Q96JM4 1722 aa23.63■■□□□ 1.37
TMEM40-204ENST00000435218 HECW1Q76N89 1606 aa23.61■■□□□ 1.37
TMEM40-204ENST00000435218 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
TMEM40-204ENST00000435218 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
TMEM40-204ENST00000435218 OSCARQ8IYS5 282 aa23.58■■□□□ 1.36
TMEM40-204ENST00000435218 APLP2Q06481 763 aa23.56■■□□□ 1.36
TMEM40-204ENST00000435218 ERCC6L2Q5T890 1561 aa23.55■■□□□ 1.36
TMEM40-204ENST00000435218 ABCA8O94911 1581 aa23.52■■□□□ 1.36
TMEM40-204ENST00000435218 CCDC18Q5T9S5 1454 aa23.52■■□□□ 1.36
TMEM40-204ENST00000435218 PTPRGP23470 1445 aa23.46■■□□□ 1.35
TMEM40-204ENST00000435218 NUP153P49790 1475 aaKnown RBP23.46■■□□□ 1.35
TMEM40-204ENST00000435218 EPRSP07814 1512 aaKnown RBP23.46■■□□□ 1.35
TMEM40-204ENST00000435218 PLB1Q6P1J6 1458 aa23.44■■□□□ 1.34
TMEM40-204ENST00000435218 LRRC9Q6ZRR7 1453 aa23.44■■□□□ 1.34
TMEM40-204ENST00000435218 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.34
TMEM40-204ENST00000435218 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
TMEM40-204ENST00000435218 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
TMEM40-204ENST00000435218 EHBP1L1Q8N3D4 1523 aa23.37■■□□□ 1.33
TMEM40-204ENST00000435218 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
TMEM40-204ENST00000435218 CDK13Q14004 1512 aaKnown RBP23.36■■□□□ 1.33
TMEM40-204ENST00000435218 ABCC2Q92887 1545 aa23.36■■□□□ 1.33
TMEM40-204ENST00000435218 TRIM26Q12899 539 aaPredicted RBP23.36■■□□□ 1.33
TMEM40-204ENST00000435218 UHRF1BP1LA0JNW5 1464 aa23.34■■□□□ 1.33
TMEM40-204ENST00000435218 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.33
TMEM40-204ENST00000435218 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
TMEM40-204ENST00000435218 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
TMEM40-204ENST00000435218 MTUS2Q5JR59 1369 aa23.28■■□□□ 1.32
TMEM40-204ENST00000435218 ATP10BO94823 1461 aa23.28■■□□□ 1.32
TMEM40-204ENST00000435218 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
TMEM40-204ENST00000435218 ADCY10Q96PN6 1610 aa23.26■■□□□ 1.31
TMEM40-204ENST00000435218 ZCCHC11Q5TAX3 1644 aaKnown RBP23.23■■□□□ 1.31
TMEM40-204ENST00000435218 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
TMEM40-204ENST00000435218 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
TMEM40-204ENST00000435218 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
TMEM40-204ENST00000435218 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
TMEM40-204ENST00000435218 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
TMEM40-204ENST00000435218 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
TMEM40-204ENST00000435218 NCOA2Q15596 1464 aa23.19■■□□□ 1.3
TMEM40-204ENST00000435218 RRBP1Q9P2E9 1410 aaKnown RBP23.19■■□□□ 1.3
TMEM40-204ENST00000435218 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
TMEM40-204ENST00000435218 PHLDB1Q86UU1 1377 aa23.15■■□□□ 1.3
TMEM40-204ENST00000435218 ARID3CA6NKF2 412 aa23.14■■□□□ 1.3
TMEM40-204ENST00000435218 KIF14Q15058 1648 aa23.14■■□□□ 1.29
TMEM40-204ENST00000435218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
TMEM40-204ENST00000435218 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
TMEM40-204ENST00000435218 ITSN2Q9NZM3 1697 aa23.11■■□□□ 1.29
TMEM40-204ENST00000435218 MYOM3Q5VTT5 1437 aa23.1■■□□□ 1.29
TMEM40-204ENST00000435218 PLEKHD1A6NEE1 506 aa23.09■■□□□ 1.29
TMEM40-204ENST00000435218 CCNB3Q8WWL7 1395 aa23.07■■□□□ 1.28
TMEM40-204ENST00000435218 CDC42BPAQ5VT25 1732 aa23.06■■□□□ 1.28
TMEM40-204ENST00000435218 FGD6Q6ZV73 1430 aa23.06■■□□□ 1.28
TMEM40-204ENST00000435218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.28
TMEM40-204ENST00000435218 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
TMEM40-204ENST00000435218 MIA2Q96PC5 1412 aa23.03■■□□□ 1.28
TMEM40-204ENST00000435218 PTPN23Q9H3S7 1636 aa23.02■■□□□ 1.28
TMEM40-204ENST00000435218 TCOF1Q13428 1488 aaKnown RBP22.99■■□□□ 1.27
TMEM40-204ENST00000435218 MYO5CQ9NQX4 1742 aa22.98■■□□□ 1.27
TMEM40-204ENST00000435218 WDR7Q9Y4E6 1490 aa22.97■■□□□ 1.27
TMEM40-204ENST00000435218 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
TMEM40-204ENST00000435218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.97■■□□□ 1.27
TMEM40-204ENST00000435218 GPATCH8Q9UKJ3 1502 aaKnown RBP22.96■■□□□ 1.27
TMEM40-204ENST00000435218 TTC37Q6PGP7 1564 aa22.96■■□□□ 1.27
TMEM40-204ENST00000435218 CDC42BPBQ9Y5S2 1711 aa22.96■■□□□ 1.27
TMEM40-204ENST00000435218 DNAJC5Q9H3Z4 198 aa22.93■■□□□ 1.26
TMEM40-204ENST00000435218 MAPKBP1O60336 1514 aa22.93■■□□□ 1.26
TMEM40-204ENST00000435218 ASXL2Q76L83 1435 aa22.92■■□□□ 1.26
TMEM40-204ENST00000435218 ABCA9Q8IUA7 1624 aa22.91■■□□□ 1.26
TMEM40-204ENST00000435218 NPM1P06748 294 aaKnown RBP eCLIP22.91■■□□□ 1.26
TMEM40-204ENST00000435218 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
TMEM40-204ENST00000435218 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
TMEM40-204ENST00000435218 DNMT1P26358 1616 aaKnown RBP22.85■■□□□ 1.25
TMEM40-204ENST00000435218 CAMSAP2Q08AD1 1489 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms