RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 PCF11O94913 1555 aaKnown RBP36.62■■■■□ 3.45
LMBR1-209ENST00000434453 CFAP43Q8NDM7 1665 aa36.62■■■■□ 3.45
LMBR1-209ENST00000434453 FHAD1B1AJZ9 1412 aa36.61■■■■□ 3.45
LMBR1-209ENST00000434453 GTF3C3Q9Y5Q9 886 aa36.59■■■■□ 3.45
LMBR1-209ENST00000434453 CUL7Q14999 1698 aa36.57■■■■□ 3.44
LMBR1-209ENST00000434453 ITGAEP38570 1179 aa36.55■■■■□ 3.44
LMBR1-209ENST00000434453 PHLDB1Q86UU1 1377 aa36.55■■■■□ 3.44
LMBR1-209ENST00000434453 WDR97A6NE52 1622 aa36.53■■■■□ 3.44
LMBR1-209ENST00000434453 P3H3Q8IVL6 736 aa36.51■■■■□ 3.44
LMBR1-209ENST00000434453 LAMC3Q9Y6N6 1575 aa36.51■■■■□ 3.44
LMBR1-209ENST00000434453 CTTNBP2Q8WZ74 1663 aa36.51■■■■□ 3.44
LMBR1-209ENST00000434453 URB2Q14146 1524 aaKnown RBP36.5■■■■□ 3.43
LMBR1-209ENST00000434453 FHOD3Q2V2M9 1422 aa36.5■■■■□ 3.43
LMBR1-209ENST00000434453 RAB3GAP2Q9H2M9 1393 aa36.49■■■■□ 3.43
LMBR1-209ENST00000434453 EFCAB5A4FU69 1503 aa36.49■■■■□ 3.43
LMBR1-209ENST00000434453 YTHDC1Q96MU7 727 aaKnown RBP36.44■■■■□ 3.42
LMBR1-209ENST00000434453 FYCO1Q9BQS8 1478 aa36.43■■■■□ 3.42
LMBR1-209ENST00000434453 MAPKBP1O60336 1514 aa36.42■■■■□ 3.42
LMBR1-209ENST00000434453 AQRO60306 1485 aaKnown RBP eCLIP36.38■■■■□ 3.415e-8■■■■■ 27.4
LMBR1-209ENST00000434453 CASKIN1Q8WXD9 1431 aa36.38■■■■□ 3.41
LMBR1-209ENST00000434453 ABCA5Q8WWZ7 1642 aa36.36■■■■□ 3.41
LMBR1-209ENST00000434453 SETD5Q9C0A6 1442 aa36.36■■■■□ 3.41
LMBR1-209ENST00000434453 PELP1Q8IZL8 1130 aaKnown RBP36.32■■■■□ 3.4
LMBR1-209ENST00000434453 ATP1B4Q9UN42 357 aaPredicted RBP36.28■■■■□ 3.4
LMBR1-209ENST00000434453 FAM50AQ14320 339 aaKnown RBP36.27■■■■□ 3.4
LMBR1-209ENST00000434453 TDRD9Q8NDG6 1382 aaKnown RBP36.26■■■■□ 3.4
LMBR1-209ENST00000434453 SNAPC4Q5SXM2 1469 aa36.25■■■■□ 3.39
LMBR1-209ENST00000434453 DNAJC5BQ9UF47 199 aa36.23■■■■□ 3.39
LMBR1-209ENST00000434453 GAPVD1Q14C86 1478 aa36.21■■■■□ 3.39
LMBR1-209ENST00000434453 FMN1Q68DA7 1419 aa36.21■■■■□ 3.39
LMBR1-209ENST00000434453 SAMD9Q5K651 1589 aa36.21■■■■□ 3.39
LMBR1-209ENST00000434453 KIF21AQ7Z4S6 1674 aa36.2■■■■□ 3.39
LMBR1-209ENST00000434453 PDS5BQ9NTI5 1447 aa36.19■■■■□ 3.38
LMBR1-209ENST00000434453 LRRIQ1Q96JM4 1722 aa36.16■■■■□ 3.38
LMBR1-209ENST00000434453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.16■■■■□ 3.384e-7■■■■□ 21.6
LMBR1-209ENST00000434453 TARBP1Q13395 1621 aaKnown RBP36.09■■■■□ 3.37
LMBR1-209ENST00000434453 FGD6Q6ZV73 1430 aa36.06■■■■□ 3.36
LMBR1-209ENST00000434453 GRIN2BQ13224 1484 aa36.03■■■■□ 3.36
LMBR1-209ENST00000434453 SIN3AQ96ST3 1273 aa36■■■■□ 3.35
LMBR1-209ENST00000434453 MTUS2Q5JR59 1369 aa35.97■■■■□ 3.35
LMBR1-209ENST00000434453 THOC2Q8NI27 1593 aaKnown RBP35.95■■■■□ 3.35
LMBR1-209ENST00000434453 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
LMBR1-209ENST00000434453 PTPRKQ15262 1439 aa35.91■■■■□ 3.34
LMBR1-209ENST00000434453 NCOA2Q15596 1464 aa35.89■■■■□ 3.34
LMBR1-209ENST00000434453 SUPT6HQ7KZ85 1726 aaKnown RBP35.85■■■■□ 3.33
LMBR1-209ENST00000434453 MYOM3Q5VTT5 1437 aa35.84■■■■□ 3.33
LMBR1-209ENST00000434453 EHBP1L1Q8N3D4 1523 aa35.83■■■■□ 3.33
LMBR1-209ENST00000434453 TIMELESSQ9UNS1 1208 aa35.82■■■■□ 3.32
LMBR1-209ENST00000434453 HFM1A2PYH4 1435 aa35.82■■■■□ 3.32
LMBR1-209ENST00000434453 MAGI3Q5TCQ9 1506 aa35.81■■■■□ 3.32
LMBR1-209ENST00000434453 CCDC18Q5T9S5 1454 aa35.8■■■■□ 3.32
LMBR1-209ENST00000434453 PTPN23Q9H3S7 1636 aa35.8■■■■□ 3.32
LMBR1-209ENST00000434453 ARHGEF11O15085 1522 aa35.78■■■■□ 3.32
LMBR1-209ENST00000434453 UGGT2Q9NYU1 1516 aa35.77■■■■□ 3.32
LMBR1-209ENST00000434453 ADAMTS12P58397 1594 aa35.76■■■■□ 3.32
LMBR1-209ENST00000434453 IQGAP2Q13576 1575 aa35.73■■■■□ 3.31
LMBR1-209ENST00000434453 NAIPQ13075 1403 aa35.72■■■■□ 3.31
LMBR1-209ENST00000434453 PPP1R15AO75807 674 aaPredicted RBP35.71■■■■□ 3.31
LMBR1-209ENST00000434453 UACAQ9BZF9 1416 aa35.71■■■■□ 3.31
LMBR1-209ENST00000434453 MRC2Q9UBG0 1479 aa35.69■■■■□ 3.3
LMBR1-209ENST00000434453 HECW1Q76N89 1606 aa35.67■■■■□ 3.3
LMBR1-209ENST00000434453 KCNH8Q96L42 1107 aa35.61■■■■□ 3.29
LMBR1-209ENST00000434453 EPRSP07814 1512 aaKnown RBP35.6■■■■□ 3.29
LMBR1-209ENST00000434453 TCOF1Q13428 1488 aaKnown RBP35.59■■■■□ 3.29
LMBR1-209ENST00000434453 DDX10Q13206 875 aaKnown RBP35.57■■■■□ 3.29
LMBR1-209ENST00000434453 WDR62O43379 1518 aa35.56■■■■□ 3.28
LMBR1-209ENST00000434453 CDK13Q14004 1512 aaKnown RBP35.54■■■■□ 3.28
LMBR1-209ENST00000434453 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
LMBR1-209ENST00000434453 TONSLQ96HA7 1378 aa35.51■■■■□ 3.28
LMBR1-209ENST00000434453 GCC2Q8IWJ2 1684 aa35.51■■■■□ 3.27
LMBR1-209ENST00000434453 HIRIP3Q9BW71 556 aaPredicted RBP35.49■■■■□ 3.27
LMBR1-209ENST00000434453 KDM5BQ9UGL1 1544 aa35.47■■■■□ 3.27
LMBR1-209ENST00000434453 IFT140Q96RY7 1462 aa35.46■■■■□ 3.27
LMBR1-209ENST00000434453 RRP7BPQ9NSQ0 103 aa35.42■■■■□ 3.26
LMBR1-209ENST00000434453 DENND4BO75064 1496 aaPredicted RBP35.42■■■■□ 3.26
LMBR1-209ENST00000434453 KDM6BO15054 1643 aa35.41■■■■□ 3.26
LMBR1-209ENST00000434453 AKNAQ7Z591 1439 aa35.4■■■■□ 3.26
LMBR1-209ENST00000434453 MIA2Q96PC5 1412 aa35.4■■■■□ 3.26
LMBR1-209ENST00000434453 CHIC2Q9UKJ5 165 aa35.38■■■■□ 3.25
LMBR1-209ENST00000434453 SUPT16HQ9Y5B9 1047 aaKnown RBP35.38■■■■□ 3.25
LMBR1-209ENST00000434453 DISP1Q96F81 1524 aa35.38■■■■□ 3.25
LMBR1-209ENST00000434453 KIAA0556O60303 1618 aa35.37■■■■□ 3.25
LMBR1-209ENST00000434453 KIAA0586Q9BVV6 1533 aa35.36■■■■□ 3.25
LMBR1-209ENST00000434453 ARID3CA6NKF2 412 aa35.34■■■■□ 3.25
LMBR1-209ENST00000434453 EIF4G3O43432 1585 aaKnown RBP35.29■■■■□ 3.24
LMBR1-209ENST00000434453 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
LMBR1-209ENST00000434453 NUP153P49790 1475 aaKnown RBP35.26■■■■□ 3.24
LMBR1-209ENST00000434453 RAPGEF6Q8TEU7 1601 aa35.22■■■■□ 3.23
LMBR1-209ENST00000434453 CCER2I3L3R5 266 aa35.19■■■■□ 3.22
LMBR1-209ENST00000434453 TRIM52Q96A61 297 aa35.18■■■■□ 3.22
LMBR1-209ENST00000434453 DAPK1P53355 1430 aa35.17■■■■□ 3.22
LMBR1-209ENST00000434453 DNMT1P26358 1616 aaKnown RBP35.16■■■■□ 3.22
LMBR1-209ENST00000434453 ANP32CO43423 234 aa35.15■■■■□ 3.22
LMBR1-209ENST00000434453 MPHOSPH9Q99550 1183 aa35.14■■■■□ 3.22
LMBR1-209ENST00000434453 ROCK1Q13464 1354 aa35.12■■■■□ 3.21
LMBR1-209ENST00000434453 ABCC5O15440 1437 aa35.12■■■■□ 3.21
LMBR1-209ENST00000434453 ZNF644Q9H582 1327 aaPredicted RBP35.09■■■■□ 3.21
LMBR1-209ENST00000434453 CEP170Q5SW79 1584 aa35.08■■■■□ 3.21
LMBR1-209ENST00000434453 MAGI1Q96QZ7 1491 aaPredicted RBP35.07■■■■□ 3.2
LMBR1-209ENST00000434453 ERCC6Q03468 1493 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms