RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 EHMT2Q96KQ7 1210 aa24.59■■□□□ 1.53
RBM39-213ENST00000433027 IQGAP2Q13576 1575 aa24.56■■□□□ 1.52
RBM39-213ENST00000433027 CLIP1P30622 1438 aa24.56■■□□□ 1.52
RBM39-213ENST00000433027 EFCAB5A4FU69 1503 aa24.55■■□□□ 1.52
RBM39-213ENST00000433027 CHD1O14646 1710 aa24.54■■□□□ 1.52
RBM39-213ENST00000433027 FBLN2P98095 1184 aa24.52■■□□□ 1.52
RBM39-213ENST00000433027 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
RBM39-213ENST00000433027 UGGT2Q9NYU1 1516 aa24.49■■□□□ 1.51
RBM39-213ENST00000433027 SAMD9Q5K651 1589 aa24.42■■□□□ 1.5
RBM39-213ENST00000433027 ARHGAP35Q9NRY4 1499 aa24.42■■□□□ 1.5
RBM39-213ENST00000433027 CLASP1Q7Z460 1538 aa24.37■■□□□ 1.49
RBM39-213ENST00000433027 JPH4Q96JJ6 628 aa24.34■■□□□ 1.49
RBM39-213ENST00000433027 SHROOM2Q13796 1616 aa24.34■■□□□ 1.49
RBM39-213ENST00000433027 CARMIL2Q6F5E8 1435 aa24.34■■□□□ 1.49
RBM39-213ENST00000433027 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
RBM39-213ENST00000433027 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
RBM39-213ENST00000433027 OSCARQ8IYS5 282 aa24.31■■□□□ 1.48
RBM39-213ENST00000433027 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
RBM39-213ENST00000433027 KIAA0556O60303 1618 aa24.29■■□□□ 1.48
RBM39-213ENST00000433027 DISP1Q96F81 1524 aa24.28■■□□□ 1.48
RBM39-213ENST00000433027 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
RBM39-213ENST00000433027 FHOD3Q2V2M9 1422 aa24.21■■□□□ 1.47
RBM39-213ENST00000433027 PRG4Q92954 1404 aaPredicted RBP24.19■■□□□ 1.46
RBM39-213ENST00000433027 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
RBM39-213ENST00000433027 CASKIN1Q8WXD9 1431 aa24.16■■□□□ 1.46
RBM39-213ENST00000433027 MAP3K1Q13233 1512 aa24.14■■□□□ 1.45
RBM39-213ENST00000433027 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
RBM39-213ENST00000433027 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
RBM39-213ENST00000433027 APLP2Q06481 763 aa24.08■■□□□ 1.45
RBM39-213ENST00000433027 PCF11O94913 1555 aaKnown RBP24.05■■□□□ 1.44
RBM39-213ENST00000433027 PTPRGP23470 1445 aa24.05■■□□□ 1.44
RBM39-213ENST00000433027 HECW1Q76N89 1606 aa24.04■■□□□ 1.44
RBM39-213ENST00000433027 CCDC18Q5T9S5 1454 aa24.03■■□□□ 1.44
RBM39-213ENST00000433027 RAPGEF6Q8TEU7 1601 aa24.01■■□□□ 1.43
RBM39-213ENST00000433027 ABCA8O94911 1581 aa23.99■■□□□ 1.43
RBM39-213ENST00000433027 CFAP43Q8NDM7 1665 aa23.95■■□□□ 1.43
RBM39-213ENST00000433027 TIAM1Q13009 1591 aa23.95■■□□□ 1.43
RBM39-213ENST00000433027 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.42
RBM39-213ENST00000433027 UHRF1BP1LA0JNW5 1464 aa23.94■■□□□ 1.42
RBM39-213ENST00000433027 UACAQ9BZF9 1416 aa23.93■■□□□ 1.42
RBM39-213ENST00000433027 EPRSP07814 1512 aaKnown RBP23.9■■□□□ 1.42
RBM39-213ENST00000433027 NUP153P49790 1475 aaKnown RBP23.9■■□□□ 1.42
RBM39-213ENST00000433027 PLB1Q6P1J6 1458 aa23.9■■□□□ 1.42
RBM39-213ENST00000433027 ABCC2Q92887 1545 aa23.89■■□□□ 1.41
RBM39-213ENST00000433027 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
RBM39-213ENST00000433027 RIMBP3CA6NJZ7 1639 aa23.87■■□□□ 1.41
RBM39-213ENST00000433027 RIMBP3BA6NNM3 1639 aa23.87■■□□□ 1.41
RBM39-213ENST00000433027 RIMBP3Q9UFD9 1639 aa23.87■■□□□ 1.41
RBM39-213ENST00000433027 CDK11AQ9UQ88 783 aaPredicted RBP23.85■■□□□ 1.41
RBM39-213ENST00000433027 LRRC9Q6ZRR7 1453 aa23.85■■□□□ 1.41
RBM39-213ENST00000433027 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.41
RBM39-213ENST00000433027 LRRIQ1Q96JM4 1722 aa23.81■■□□□ 1.4
RBM39-213ENST00000433027 EHBP1L1Q8N3D4 1523 aa23.8■■□□□ 1.4
RBM39-213ENST00000433027 KDM5BQ9UGL1 1544 aa23.78■■□□□ 1.4
RBM39-213ENST00000433027 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
RBM39-213ENST00000433027 ATP10BO94823 1461 aa23.76■■□□□ 1.39
RBM39-213ENST00000433027 TTBK1Q5TCY1 1321 aaPredicted RBP23.76■■□□□ 1.39
RBM39-213ENST00000433027 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
RBM39-213ENST00000433027 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
RBM39-213ENST00000433027 ADCY10Q96PN6 1610 aa23.7■■□□□ 1.39
RBM39-213ENST00000433027 TROQ12816 1431 aaPredicted RBP23.7■■□□□ 1.38
RBM39-213ENST00000433027 SUPT6HQ7KZ85 1726 aaKnown RBP23.69■■□□□ 1.38
RBM39-213ENST00000433027 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
RBM39-213ENST00000433027 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
RBM39-213ENST00000433027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.65■■□□□ 1.38
RBM39-213ENST00000433027 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
RBM39-213ENST00000433027 ZCCHC11Q5TAX3 1644 aaKnown RBP23.65■■□□□ 1.38
RBM39-213ENST00000433027 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
RBM39-213ENST00000433027 NPM1P06748 294 aaKnown RBP eCLIP23.61■■□□□ 1.37
RBM39-213ENST00000433027 NCOA2Q15596 1464 aa23.6■■□□□ 1.37
RBM39-213ENST00000433027 KIF14Q15058 1648 aa23.59■■□□□ 1.37
RBM39-213ENST00000433027 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.36
RBM39-213ENST00000433027 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
RBM39-213ENST00000433027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.55■■□□□ 1.36
RBM39-213ENST00000433027 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
RBM39-213ENST00000433027 MYOM3Q5VTT5 1437 aa23.53■■□□□ 1.36
RBM39-213ENST00000433027 MIA2Q96PC5 1412 aa23.53■■□□□ 1.36
RBM39-213ENST00000433027 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
RBM39-213ENST00000433027 WDR7Q9Y4E6 1490 aa23.53■■□□□ 1.36
RBM39-213ENST00000433027 MAPKBP1O60336 1514 aa23.52■■□□□ 1.36
RBM39-213ENST00000433027 PHLDB1Q86UU1 1377 aa23.51■■□□□ 1.35
RBM39-213ENST00000433027 ITSN2Q9NZM3 1697 aa23.49■■□□□ 1.35
RBM39-213ENST00000433027 ABCC10Q5T3U5 1492 aa23.49■■□□□ 1.35
RBM39-213ENST00000433027 CCNB3Q8WWL7 1395 aa23.48■■□□□ 1.35
RBM39-213ENST00000433027 FGD6Q6ZV73 1430 aa23.47■■□□□ 1.35
RBM39-213ENST00000433027 ASXL2Q76L83 1435 aa23.47■■□□□ 1.35
RBM39-213ENST00000433027 ARAP3Q8WWN8 1544 aa23.43■■□□□ 1.34
RBM39-213ENST00000433027 GPATCH8Q9UKJ3 1502 aaKnown RBP23.41■■□□□ 1.34
RBM39-213ENST00000433027 TCOF1Q13428 1488 aaKnown RBP23.41■■□□□ 1.34
RBM39-213ENST00000433027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.4■■□□□ 1.34
RBM39-213ENST00000433027 ABCA9Q8IUA7 1624 aa23.38■■□□□ 1.33
RBM39-213ENST00000433027 CDC42BPAQ5VT25 1732 aa23.36■■□□□ 1.33
RBM39-213ENST00000433027 PREX2Q70Z35 1606 aa23.36■■□□□ 1.33
RBM39-213ENST00000433027 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
RBM39-213ENST00000433027 MYO5CQ9NQX4 1742 aa23.35■■□□□ 1.33
RBM39-213ENST00000433027 CFDP1Q9UEE9 299 aaPredicted RBP23.34■■□□□ 1.33
RBM39-213ENST00000433027 PLCH2O75038 1416 aa23.33■■□□□ 1.33
RBM39-213ENST00000433027 GLI2P10070 1586 aa23.33■■□□□ 1.33
RBM39-213ENST00000433027 TTC37Q6PGP7 1564 aa23.33■■□□□ 1.33
RBM39-213ENST00000433027 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms