RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 KLHL34Q8N239 644 aa10.57□□□□□ -0.72
NIPAL3-205ENST00000432012 ILDR1Q86SU0 546 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-205ENST00000432012 HOMEZQ8IX15 550 aa10.56□□□□□ -0.72
NIPAL3-205ENST00000432012 U3KPZ7 1027 aaPredicted RBP10.56□□□□□ -0.72
NIPAL3-205ENST00000432012 TSHZ2Q9NRE2 1034 aa10.55□□□□□ -0.72
NIPAL3-205ENST00000432012 PODXL2Q9NZ53 605 aa10.54□□□□□ -0.72
NIPAL3-205ENST00000432012 RSF1Q96T23 1441 aaPredicted RBP10.53□□□□□ -0.72
NIPAL3-205ENST00000432012 ARAP1Q96P48 1450 aa10.53□□□□□ -0.72
NIPAL3-205ENST00000432012 VASPP50552 380 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-205ENST00000432012 FANCD2Q9BXW9 1451 aa10.47□□□□□ -0.73
NIPAL3-205ENST00000432012 TMEM132AQ24JP5 1023 aa10.44□□□□□ -0.74
NIPAL3-205ENST00000432012 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
NIPAL3-205ENST00000432012 FBXO3Q9UK99 471 aa10.42□□□□□ -0.74
NIPAL3-205ENST00000432012 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-205ENST00000432012 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
NIPAL3-205ENST00000432012 APLP2Q06481 763 aa10.4□□□□□ -0.75
NIPAL3-205ENST00000432012 BBXQ8WY36 941 aaPredicted RBP10.39□□□□□ -0.75
NIPAL3-205ENST00000432012 URB2Q14146 1524 aaKnown RBP10.39□□□□□ -0.75
NIPAL3-205ENST00000432012 SAMD1Q6SPF0 538 aaPredicted RBP10.38□□□□□ -0.75
NIPAL3-205ENST00000432012 CHD1O14646 1710 aa10.36□□□□□ -0.75
NIPAL3-205ENST00000432012 CFTRP13569 1480 aa10.35□□□□□ -0.75
NIPAL3-205ENST00000432012 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
NIPAL3-205ENST00000432012 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
NIPAL3-205ENST00000432012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.34□□□□□ -0.75
NIPAL3-205ENST00000432012 HNRNPUL2Q1KMD3 747 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-205ENST00000432012 NBR1Q14596 966 aa10.32□□□□□ -0.76
NIPAL3-205ENST00000432012 ZNF608Q9ULD9 1512 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-205ENST00000432012 EIF4G3O43432 1585 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-205ENST00000432012 SUPT5HO00267 1087 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-205ENST00000432012 RGL2O15211 777 aa10.3□□□□□ -0.76
NIPAL3-205ENST00000432012 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
NIPAL3-205ENST00000432012 ZNF219Q9P2Y4 722 aaPredicted RBP10.28□□□□□ -0.76
NIPAL3-205ENST00000432012 MROH2BQ7Z745 1585 aa10.28□□□□□ -0.76
NIPAL3-205ENST00000432012 SPRYD3Q8NCJ5 442 aa10.28□□□□□ -0.76
NIPAL3-205ENST00000432012 PRDM2Q13029 1718 aa10.27□□□□□ -0.76
NIPAL3-205ENST00000432012 CLASP1Q7Z460 1538 aa10.27□□□□□ -0.76
NIPAL3-205ENST00000432012 ERCC6L2Q5T890 1561 aa10.27□□□□□ -0.77
NIPAL3-205ENST00000432012 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-205ENST00000432012 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
NIPAL3-205ENST00000432012 PROM2Q8N271 834 aa10.24□□□□□ -0.77
NIPAL3-205ENST00000432012 SPINK5Q9NQ38 1064 aaPredicted RBP10.23□□□□□ -0.77
NIPAL3-205ENST00000432012 MKRN4PQ13434 485 aaPredicted RBP10.22□□□□□ -0.77
NIPAL3-205ENST00000432012 WDR97A6NE52 1622 aa10.21□□□□□ -0.78
NIPAL3-205ENST00000432012 GAPVD1Q14C86 1478 aa10.2□□□□□ -0.78
NIPAL3-205ENST00000432012 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
NIPAL3-205ENST00000432012 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
NIPAL3-205ENST00000432012 FBXO41Q8TF61 875 aa10.19□□□□□ -0.78
NIPAL3-205ENST00000432012 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
NIPAL3-205ENST00000432012 KDM4FA0A1W2PPD8 638 aa10.17□□□□□ -0.78
NIPAL3-205ENST00000432012 TARBP1Q13395 1621 aaKnown RBP10.17□□□□□ -0.78
NIPAL3-205ENST00000432012 UBTFP17480 764 aaKnown RBP10.16□□□□□ -0.78
NIPAL3-205ENST00000432012 DNMBPQ6XZF7 1577 aa10.15□□□□□ -0.78
NIPAL3-205ENST00000432012 AQRO60306 1485 aaKnown RBP eCLIP10.15□□□□□ -0.78
NIPAL3-205ENST00000432012 CHGAP10645 457 aaKnown RBP10.14□□□□□ -0.79
NIPAL3-205ENST00000432012 KIF13AQ9H1H9 1805 aa10.14□□□□□ -0.79
NIPAL3-205ENST00000432012 MAGI1Q96QZ7 1491 aaPredicted RBP10.13□□□□□ -0.79
NIPAL3-205ENST00000432012 WIZO95785 1651 aa10.12□□□□□ -0.79
NIPAL3-205ENST00000432012 CHMP7Q8WUX9 453 aaPredicted RBP10.11□□□□□ -0.79
NIPAL3-205ENST00000432012 POLA2Q14181 598 aa10.1□□□□□ -0.79
NIPAL3-205ENST00000432012 LMTK3Q96Q04 1460 aa10.09□□□□□ -0.79
NIPAL3-205ENST00000432012 KDM6BO15054 1643 aa10.08□□□□□ -0.8
NIPAL3-205ENST00000432012 ERICH6Q7L0X2 663 aa10.08□□□□□ -0.8
NIPAL3-205ENST00000432012 SNAPC4Q5SXM2 1469 aa10.08□□□□□ -0.8
NIPAL3-205ENST00000432012 HECW2Q9P2P5 1572 aa10.08□□□□□ -0.8
NIPAL3-205ENST00000432012 SYNJ2O15056 1496 aa10.07□□□□□ -0.8
NIPAL3-205ENST00000432012 CAPN15O75808 1086 aa10.07□□□□□ -0.8
NIPAL3-205ENST00000432012 RNF39Q9H2S5 420 aa10.07□□□□□ -0.8
NIPAL3-205ENST00000432012 HRCP23327 699 aa10.06□□□□□ -0.8
NIPAL3-205ENST00000432012 SOCS7O14512 581 aa10.06□□□□□ -0.8
NIPAL3-205ENST00000432012 TOP2AP11388 1531 aaKnown RBP10.05□□□□□ -0.8
NIPAL3-205ENST00000432012 PELP1Q8IZL8 1130 aaKnown RBP10.05□□□□□ -0.8
NIPAL3-205ENST00000432012 GRIN2BQ13224 1484 aa10.03□□□□□ -0.8
NIPAL3-205ENST00000432012 ABCC10Q5T3U5 1492 aa10.03□□□□□ -0.8
NIPAL3-205ENST00000432012 POLA1P09884 1462 aaPredicted RBP10.02□□□□□ -0.81
NIPAL3-205ENST00000432012 SPOCK2Q92563 424 aa10.02□□□□□ -0.81
NIPAL3-205ENST00000432012 ABCB7O75027 752 aa10.02□□□□□ -0.81
NIPAL3-205ENST00000432012 ADGRL1O94910 1474 aa10□□□□□ -0.81
NIPAL3-205ENST00000432012 MAPKBP1O60336 1514 aa9.99□□□□□ -0.81
NIPAL3-205ENST00000432012 SOGA1O94964 1423 aa9.98□□□□□ -0.81
NIPAL3-205ENST00000432012 FAM69CQ0P6D2 419 aa9.98□□□□□ -0.81
NIPAL3-205ENST00000432012 TDRD9Q8NDG6 1382 aaKnown RBP9.97□□□□□ -0.81
NIPAL3-205ENST00000432012 DIP2BQ9P265 1576 aa9.97□□□□□ -0.81
NIPAL3-205ENST00000432012 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.81
NIPAL3-205ENST00000432012 CEP170Q5SW79 1584 aa9.94□□□□□ -0.82
NIPAL3-205ENST00000432012 NKX1-1Q15270 411 aaPredicted RBP9.94□□□□□ -0.82
NIPAL3-205ENST00000432012 SHROOM2Q13796 1616 aa9.94□□□□□ -0.82
NIPAL3-205ENST00000432012 LOC105371045A0A1W2PR82 267 aa9.93□□□□□ -0.82
NIPAL3-205ENST00000432012 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
NIPAL3-205ENST00000432012 RAD54L2Q9Y4B4 1467 aa9.93□□□□□ -0.82
NIPAL3-205ENST00000432012 PBRM1Q86U86 1689 aa9.92□□□□□ -0.82
NIPAL3-205ENST00000432012 TOP2BQ02880 1626 aa9.92□□□□□ -0.82
NIPAL3-205ENST00000432012 EIF5BO60841 1220 aaKnown RBP9.91□□□□□ -0.82
NIPAL3-205ENST00000432012 MYT1Q01538 1121 aa9.9□□□□□ -0.82
NIPAL3-205ENST00000432012 NUP160Q12769 1436 aa9.88□□□□□ -0.83
NIPAL3-205ENST00000432012 C1QBPQ07021 282 aaKnown RBP9.88□□□□□ -0.83
NIPAL3-205ENST00000432012 GRIN2AQ12879 1464 aa9.87□□□□□ -0.83
NIPAL3-205ENST00000432012 RNF25Q96BH1 459 aaPredicted RBP9.87□□□□□ -0.83
NIPAL3-205ENST00000432012 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
NIPAL3-205ENST00000432012 TTBK1Q5TCY1 1321 aaPredicted RBP9.86□□□□□ -0.83
NIPAL3-205ENST00000432012 CCDC88BA6NC98 1476 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms