RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 LRRC9Q6ZRR7 1453 aa19.66■□□□□ 0.74
NF1-204ENST00000431387 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
NF1-204ENST00000431387 P3H3Q8IVL6 736 aa19.64■□□□□ 0.73
NF1-204ENST00000431387 PHLDB1Q86UU1 1377 aa19.62■□□□□ 0.73
NF1-204ENST00000431387 RAD54L2Q9Y4B4 1467 aa19.62■□□□□ 0.73
NF1-204ENST00000431387 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
NF1-204ENST00000431387 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
NF1-204ENST00000431387 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
NF1-204ENST00000431387 PCF11O94913 1555 aaKnown RBP19.59■□□□□ 0.73
NF1-204ENST00000431387 MAPKBP1O60336 1514 aa19.58■□□□□ 0.73
NF1-204ENST00000431387 BCANQ96GW7 911 aa19.58■□□□□ 0.72
NF1-204ENST00000431387 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.72
NF1-204ENST00000431387 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
NF1-204ENST00000431387 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
NF1-204ENST00000431387 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
NF1-204ENST00000431387 SETD5Q9C0A6 1442 aa19.57■□□□□ 0.72
NF1-204ENST00000431387 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
NF1-204ENST00000431387 CFAP43Q8NDM7 1665 aa19.56■□□□□ 0.72
NF1-204ENST00000431387 FAM50AQ14320 339 aaKnown RBP19.56■□□□□ 0.72
NF1-204ENST00000431387 FHOD3Q2V2M9 1422 aa19.55■□□□□ 0.72
NF1-204ENST00000431387 NESP48681 1621 aa19.55■□□□□ 0.72
NF1-204ENST00000431387 BCL11AQ9H165 835 aa19.49■□□□□ 0.71
NF1-204ENST00000431387 FYCO1Q9BQS8 1478 aa19.48■□□□□ 0.71
NF1-204ENST00000431387 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
NF1-204ENST00000431387 CASKIN1Q8WXD9 1431 aa19.47■□□□□ 0.71
NF1-204ENST00000431387 CUL7Q14999 1698 aa19.46■□□□□ 0.71
NF1-204ENST00000431387 SIN3AQ96ST3 1273 aa19.45■□□□□ 0.7
NF1-204ENST00000431387 AQRO60306 1485 aaKnown RBP eCLIP19.44■□□□□ 0.7
NF1-204ENST00000431387 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
NF1-204ENST00000431387 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
NF1-204ENST00000431387 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
NF1-204ENST00000431387 FKBP8Q14318 412 aa19.38■□□□□ 0.69
NF1-204ENST00000431387 FMN1Q68DA7 1419 aa19.38■□□□□ 0.69
NF1-204ENST00000431387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.37■□□□□ 0.69
NF1-204ENST00000431387 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
NF1-204ENST00000431387 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
NF1-204ENST00000431387 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
NF1-204ENST00000431387 FGD6Q6ZV73 1430 aa19.34■□□□□ 0.69
NF1-204ENST00000431387 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
NF1-204ENST00000431387 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
NF1-204ENST00000431387 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
NF1-204ENST00000431387 TIMELESSQ9UNS1 1208 aa19.3■□□□□ 0.68
NF1-204ENST00000431387 SAMD9Q5K651 1589 aa19.29■□□□□ 0.68
NF1-204ENST00000431387 DDX10Q13206 875 aaKnown RBP19.28■□□□□ 0.68
NF1-204ENST00000431387 PTPRKQ15262 1439 aa19.26■□□□□ 0.67
NF1-204ENST00000431387 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
NF1-204ENST00000431387 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
NF1-204ENST00000431387 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
NF1-204ENST00000431387 RBM19Q9Y4C8 960 aaKnown RBP19.25■□□□□ 0.67
NF1-204ENST00000431387 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
NF1-204ENST00000431387 PDS5BQ9NTI5 1447 aa19.24■□□□□ 0.67
NF1-204ENST00000431387 CCDC18Q5T9S5 1454 aa19.24■□□□□ 0.67
NF1-204ENST00000431387 NCOA2Q15596 1464 aa19.23■□□□□ 0.67
NF1-204ENST00000431387 HIRIP3Q9BW71 556 aaPredicted RBP19.23■□□□□ 0.67
NF1-204ENST00000431387 HFM1A2PYH4 1435 aa19.22■□□□□ 0.67
NF1-204ENST00000431387 MYOM3Q5VTT5 1437 aa19.2■□□□□ 0.66
NF1-204ENST00000431387 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
NF1-204ENST00000431387 PTPN23Q9H3S7 1636 aa19.19■□□□□ 0.66
NF1-204ENST00000431387 UACAQ9BZF9 1416 aa19.18■□□□□ 0.66
NF1-204ENST00000431387 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
NF1-204ENST00000431387 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
NF1-204ENST00000431387 NAIPQ13075 1403 aa19.17■□□□□ 0.66
NF1-204ENST00000431387 TONSLQ96HA7 1378 aa19.17■□□□□ 0.66
NF1-204ENST00000431387 SUPT6HQ7KZ85 1726 aaKnown RBP19.16■□□□□ 0.66
NF1-204ENST00000431387 EHBP1L1Q8N3D4 1523 aa19.16■□□□□ 0.66
NF1-204ENST00000431387 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
NF1-204ENST00000431387 NEFLP07196 543 aa19.14■□□□□ 0.65
NF1-204ENST00000431387 MAGI3Q5TCQ9 1506 aa19.14■□□□□ 0.65
NF1-204ENST00000431387 UGGT2Q9NYU1 1516 aa19.13■□□□□ 0.65
NF1-204ENST00000431387 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
NF1-204ENST00000431387 MSH5O43196 834 aa19.1■□□□□ 0.65
NF1-204ENST00000431387 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
NF1-204ENST00000431387 ANP32CO43423 234 aa19.06■□□□□ 0.64
NF1-204ENST00000431387 CHIC2Q9UKJ5 165 aa19.06■□□□□ 0.64
NF1-204ENST00000431387 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
NF1-204ENST00000431387 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
NF1-204ENST00000431387 CCER2I3L3R5 266 aa19.04■□□□□ 0.64
NF1-204ENST00000431387 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
NF1-204ENST00000431387 IQGAP2Q13576 1575 aa19.04■□□□□ 0.64
NF1-204ENST00000431387 EPRSP07814 1512 aaKnown RBP19.03■□□□□ 0.64
NF1-204ENST00000431387 KDM5BQ9UGL1 1544 aa19.02■□□□□ 0.64
NF1-204ENST00000431387 CDK13Q14004 1512 aaKnown RBP19.01■□□□□ 0.63
NF1-204ENST00000431387 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
NF1-204ENST00000431387 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
NF1-204ENST00000431387 IRX6P78412 446 aaPredicted RBP19.01■□□□□ 0.63
NF1-204ENST00000431387 DENND4BO75064 1496 aaPredicted RBP18.98■□□□□ 0.63
NF1-204ENST00000431387 GCC2Q8IWJ2 1684 aa18.98■□□□□ 0.63
NF1-204ENST00000431387 KDM6BO15054 1643 aa18.97■□□□□ 0.63
NF1-204ENST00000431387 WDR62O43379 1518 aa18.97■□□□□ 0.63
NF1-204ENST00000431387 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
NF1-204ENST00000431387 AKNAQ7Z591 1439 aa18.95■□□□□ 0.62
NF1-204ENST00000431387 MIA2Q96PC5 1412 aa18.95■□□□□ 0.62
NF1-204ENST00000431387 MPHOSPH9Q99550 1183 aa18.91■□□□□ 0.62
NF1-204ENST00000431387 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
NF1-204ENST00000431387 HSPA5P11021 654 aaKnown RBP18.9■□□□□ 0.62
NF1-204ENST00000431387 FOXD1Q16676 465 aa18.88■□□□□ 0.61
NF1-204ENST00000431387 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
NF1-204ENST00000431387 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
NF1-204ENST00000431387 DISP1Q96F81 1524 aa18.85■□□□□ 0.61
NF1-204ENST00000431387 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms