RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
CHD1L-204ENST00000431239 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
CHD1L-204ENST00000431239 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
CHD1L-204ENST00000431239 FHOD3Q2V2M9 1422 aa27.06■■□□□ 1.92
CHD1L-204ENST00000431239 LRRC9Q6ZRR7 1453 aa27.05■■□□□ 1.92
CHD1L-204ENST00000431239 PHLDB1Q86UU1 1377 aa27.04■■□□□ 1.92
CHD1L-204ENST00000431239 RAB3GAP2Q9H2M9 1393 aa27.04■■□□□ 1.92
CHD1L-204ENST00000431239 PCF11O94913 1555 aaKnown RBP27.03■■□□□ 1.92
CHD1L-204ENST00000431239 FHAD1B1AJZ9 1412 aa27■■□□□ 1.91
CHD1L-204ENST00000431239 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
CHD1L-204ENST00000431239 MAP3K1Q13233 1512 aa26.96■■□□□ 1.91
CHD1L-204ENST00000431239 PELP1Q8IZL8 1130 aaKnown RBP26.96■■□□□ 1.91
CHD1L-204ENST00000431239 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
CHD1L-204ENST00000431239 CFAP43Q8NDM7 1665 aa26.89■■□□□ 1.9
CHD1L-204ENST00000431239 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
CHD1L-204ENST00000431239 SETD5Q9C0A6 1442 aa26.88■■□□□ 1.89
CHD1L-204ENST00000431239 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
CHD1L-204ENST00000431239 MAPKBP1O60336 1514 aa26.87■■□□□ 1.89
CHD1L-204ENST00000431239 CUL7Q14999 1698 aa26.83■■□□□ 1.89
CHD1L-204ENST00000431239 SIN3AQ96ST3 1273 aa26.82■■□□□ 1.88
CHD1L-204ENST00000431239 FYCO1Q9BQS8 1478 aa26.81■■□□□ 1.88
CHD1L-204ENST00000431239 CTTNBP2Q8WZ74 1663 aa26.81■■□□□ 1.88
CHD1L-204ENST00000431239 EFCAB5A4FU69 1503 aa26.8■■□□□ 1.88
CHD1L-204ENST00000431239 CASKIN1Q8WXD9 1431 aa26.79■■□□□ 1.88
CHD1L-204ENST00000431239 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
CHD1L-204ENST00000431239 WDR97A6NE52 1622 aa26.73■■□□□ 1.87
CHD1L-204ENST00000431239 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
CHD1L-204ENST00000431239 FMN1Q68DA7 1419 aa26.71■■□□□ 1.87
CHD1L-204ENST00000431239 MTUS2Q5JR59 1369 aa26.69■■□□□ 1.86
CHD1L-204ENST00000431239 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.866e-7■■■■■ 27.9
CHD1L-204ENST00000431239 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
CHD1L-204ENST00000431239 SNAPC4Q5SXM2 1469 aa26.67■■□□□ 1.86
CHD1L-204ENST00000431239 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
CHD1L-204ENST00000431239 FGD6Q6ZV73 1430 aa26.63■■□□□ 1.85
CHD1L-204ENST00000431239 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
CHD1L-204ENST00000431239 HIRIP3Q9BW71 556 aaPredicted RBP26.6■■□□□ 1.85
CHD1L-204ENST00000431239 KCNH8Q96L42 1107 aa26.58■■□□□ 1.85
CHD1L-204ENST00000431239 LRRIQ1Q96JM4 1722 aa26.57■■□□□ 1.84
CHD1L-204ENST00000431239 SAMD9Q5K651 1589 aa26.56■■□□□ 1.84
CHD1L-204ENST00000431239 DDX10Q13206 875 aaKnown RBP26.54■■□□□ 1.84
CHD1L-204ENST00000431239 PTPRKQ15262 1439 aa26.53■■□□□ 1.84
CHD1L-204ENST00000431239 ARID3CA6NKF2 412 aa26.52■■□□□ 1.84
CHD1L-204ENST00000431239 NCOA2Q15596 1464 aa26.51■■□□□ 1.84
CHD1L-204ENST00000431239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.51■■□□□ 1.83
CHD1L-204ENST00000431239 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
CHD1L-204ENST00000431239 CCDC18Q5T9S5 1454 aa26.5■■□□□ 1.83
CHD1L-204ENST00000431239 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
CHD1L-204ENST00000431239 MYOM3Q5VTT5 1437 aa26.45■■□□□ 1.82
CHD1L-204ENST00000431239 PPP1R15AO75807 674 aaPredicted RBP26.43■■□□□ 1.82
CHD1L-204ENST00000431239 CHIC2Q9UKJ5 165 aa26.42■■□□□ 1.82
CHD1L-204ENST00000431239 HFM1A2PYH4 1435 aa26.41■■□□□ 1.82
CHD1L-204ENST00000431239 SUPT6HQ7KZ85 1726 aaKnown RBP26.41■■□□□ 1.82
CHD1L-204ENST00000431239 TONSLQ96HA7 1378 aa26.41■■□□□ 1.82
CHD1L-204ENST00000431239 MAGI3Q5TCQ9 1506 aa26.4■■□□□ 1.82
CHD1L-204ENST00000431239 PTPN23Q9H3S7 1636 aa26.4■■□□□ 1.82
CHD1L-204ENST00000431239 RRP7BPQ9NSQ0 103 aa26.39■■□□□ 1.82
CHD1L-204ENST00000431239 EHBP1L1Q8N3D4 1523 aa26.39■■□□□ 1.81
CHD1L-204ENST00000431239 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
CHD1L-204ENST00000431239 NAIPQ13075 1403 aa26.37■■□□□ 1.81
CHD1L-204ENST00000431239 TIMELESSQ9UNS1 1208 aa26.37■■□□□ 1.81
CHD1L-204ENST00000431239 UACAQ9BZF9 1416 aa26.35■■□□□ 1.81
CHD1L-204ENST00000431239 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
CHD1L-204ENST00000431239 SUPT16HQ9Y5B9 1047 aaKnown RBP26.33■■□□□ 1.81
CHD1L-204ENST00000431239 IQGAP2Q13576 1575 aa26.32■■□□□ 1.8
CHD1L-204ENST00000431239 UGGT2Q9NYU1 1516 aa26.32■■□□□ 1.8
CHD1L-204ENST00000431239 CDK13Q14004 1512 aaKnown RBP26.31■■□□□ 1.8
CHD1L-204ENST00000431239 ADAMTS12P58397 1594 aa26.28■■□□□ 1.8
CHD1L-204ENST00000431239 HECW1Q76N89 1606 aa26.26■■□□□ 1.79
CHD1L-204ENST00000431239 TRIM52Q96A61 297 aa26.26■■□□□ 1.79
CHD1L-204ENST00000431239 EPRSP07814 1512 aaKnown RBP26.26■■□□□ 1.79
CHD1L-204ENST00000431239 MRC2Q9UBG0 1479 aa26.25■■□□□ 1.79
CHD1L-204ENST00000431239 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
CHD1L-204ENST00000431239 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
CHD1L-204ENST00000431239 ANP32CO43423 234 aa26.17■■□□□ 1.78
CHD1L-204ENST00000431239 WDR62O43379 1518 aa26.16■■□□□ 1.78
CHD1L-204ENST00000431239 KDM6BO15054 1643 aa26.16■■□□□ 1.78
CHD1L-204ENST00000431239 FOXD1Q16676 465 aa26.15■■□□□ 1.78
CHD1L-204ENST00000431239 TCOF1Q13428 1488 aaKnown RBP26.13■■□□□ 1.77
CHD1L-204ENST00000431239 BCANQ96GW7 911 aa26.1■■□□□ 1.77
CHD1L-204ENST00000431239 DENND4BO75064 1496 aaPredicted RBP26.09■■□□□ 1.77
CHD1L-204ENST00000431239 GCC2Q8IWJ2 1684 aa26.08■■□□□ 1.77
CHD1L-204ENST00000431239 ZNF644Q9H582 1327 aaPredicted RBP26.08■■□□□ 1.77
CHD1L-204ENST00000431239 KDM5BQ9UGL1 1544 aa26.08■■□□□ 1.76
CHD1L-204ENST00000431239 IFT140Q96RY7 1462 aa26.07■■□□□ 1.76
CHD1L-204ENST00000431239 MPHOSPH9Q99550 1183 aa26.05■■□□□ 1.76
CHD1L-204ENST00000431239 MIA2Q96PC5 1412 aa26.04■■□□□ 1.76
CHD1L-204ENST00000431239 DISP1Q96F81 1524 aa26.04■■□□□ 1.76
CHD1L-204ENST00000431239 KIAA0556O60303 1618 aa26.02■■□□□ 1.76
CHD1L-204ENST00000431239 FBLN2P98095 1184 aa26.02■■□□□ 1.76
CHD1L-204ENST00000431239 CCER2I3L3R5 266 aa26.01■■□□□ 1.75
CHD1L-204ENST00000431239 KIAA0586Q9BVV6 1533 aa26.01■■□□□ 1.75
CHD1L-204ENST00000431239 HSPA5P11021 654 aaKnown RBP26■■□□□ 1.75
CHD1L-204ENST00000431239 NUP153P49790 1475 aaKnown RBP25.99■■□□□ 1.75
CHD1L-204ENST00000431239 FKBP8Q14318 412 aa25.99■■□□□ 1.75
CHD1L-204ENST00000431239 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
CHD1L-204ENST00000431239 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
CHD1L-204ENST00000431239 AKNAQ7Z591 1439 aa25.97■■□□□ 1.75
CHD1L-204ENST00000431239 DAPK1P53355 1430 aa25.97■■□□□ 1.75
CHD1L-204ENST00000431239 L3MBTL2Q969R5 705 aa25.96■■□□□ 1.75
CHD1L-204ENST00000431239 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms