RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 RIMBP3BA6NNM3 1639 aa33.39■■■□□ 2.93
CSNK1E-207ENST00000430335 RIMBP3Q9UFD9 1639 aa33.39■■■□□ 2.93
CSNK1E-207ENST00000430335 FAM9AQ8IZU1 332 aaPredicted RBP33.38■■■□□ 2.93
CSNK1E-207ENST00000430335 SHROOM2Q13796 1616 aa33.34■■■□□ 2.93
CSNK1E-207ENST00000430335 JPH4Q96JJ6 628 aa33.32■■■□□ 2.92
CSNK1E-207ENST00000430335 PRG4Q92954 1404 aaPredicted RBP33.21■■■□□ 2.91
CSNK1E-207ENST00000430335 IQGAP2Q13576 1575 aa33.21■■■□□ 2.91
CSNK1E-207ENST00000430335 ARAP1Q96P48 1450 aa33.2■■■□□ 2.91
CSNK1E-207ENST00000430335 KIF21BO75037 1637 aa33.19■■■□□ 2.9
CSNK1E-207ENST00000430335 ERCC6L2Q5T890 1561 aa33.17■■■□□ 2.9
CSNK1E-207ENST00000430335 CYB5RLQ6IPT4 315 aa33.12■■■□□ 2.89
CSNK1E-207ENST00000430335 CTTNBP2Q8WZ74 1663 aa33.11■■■□□ 2.89
CSNK1E-207ENST00000430335 UGGT2Q9NYU1 1516 aa33.07■■■□□ 2.89
CSNK1E-207ENST00000430335 GOLGA3Q08378 1498 aa33.04■■■□□ 2.88
CSNK1E-207ENST00000430335 CARMIL2Q6F5E8 1435 aa33.03■■■□□ 2.88
CSNK1E-207ENST00000430335 DISP1Q96F81 1524 aa32.98■■■□□ 2.87
CSNK1E-207ENST00000430335 TNIKQ9UKE5 1360 aa32.92■■■□□ 2.86
CSNK1E-207ENST00000430335 UBTFP17480 764 aaKnown RBP32.91■■■□□ 2.86
CSNK1E-207ENST00000430335 KIAA0556O60303 1618 aa32.89■■■□□ 2.86
CSNK1E-207ENST00000430335 EHMT2Q96KQ7 1210 aa32.88■■■□□ 2.85
CSNK1E-207ENST00000430335 PTPRGP23470 1445 aa32.86■■■□□ 2.85
CSNK1E-207ENST00000430335 SAMD9Q5K651 1589 aa32.76■■■□□ 2.84
CSNK1E-207ENST00000430335 TTBK1Q5TCY1 1321 aaPredicted RBP32.72■■■□□ 2.83
CSNK1E-207ENST00000430335 EFCAB5A4FU69 1503 aa32.69■■■□□ 2.82
CSNK1E-207ENST00000430335 RANGAP1P46060 587 aaPredicted RBP32.69■■■□□ 2.82
CSNK1E-207ENST00000430335 P3H3Q8IVL6 736 aa32.67■■■□□ 2.82
CSNK1E-207ENST00000430335 UACAQ9BZF9 1416 aa32.66■■■□□ 2.82
CSNK1E-207ENST00000430335 ADCY10Q96PN6 1610 aa32.64■■■□□ 2.82
CSNK1E-207ENST00000430335 UHRF1BP1LA0JNW5 1464 aa32.63■■■□□ 2.81
CSNK1E-207ENST00000430335 FHOD3Q2V2M9 1422 aa32.58■■■□□ 2.81
CSNK1E-207ENST00000430335 ABCC2Q92887 1545 aa32.57■■■□□ 2.8
CSNK1E-207ENST00000430335 NPM1P06748 294 aaKnown RBP eCLIP32.56■■■□□ 2.8
CSNK1E-207ENST00000430335 ARHGAP35Q9NRY4 1499 aa32.55■■■□□ 2.8
CSNK1E-207ENST00000430335 PLB1Q6P1J6 1458 aa32.54■■■□□ 2.8
CSNK1E-207ENST00000430335 ABCA8O94911 1581 aa32.53■■■□□ 2.8
CSNK1E-207ENST00000430335 LOC105371045A0A1W2PR82 267 aa32.5■■■□□ 2.79
CSNK1E-207ENST00000430335 KDM5BQ9UGL1 1544 aa32.46■■■□□ 2.79
CSNK1E-207ENST00000430335 CLIP1P30622 1438 aa32.44■■■□□ 2.78
CSNK1E-207ENST00000430335 MAPKBP1O60336 1514 aa32.44■■■□□ 2.78
CSNK1E-207ENST00000430335 FMN1Q68DA7 1419 aa32.4■■■□□ 2.78
CSNK1E-207ENST00000430335 RAPGEF6Q8TEU7 1601 aa32.38■■■□□ 2.77
CSNK1E-207ENST00000430335 CEP162Q5TB80 1403 aa32.35■■■□□ 2.77
CSNK1E-207ENST00000430335 TRHP20396 242 aaPredicted RBP32.34■■■□□ 2.77
CSNK1E-207ENST00000430335 ZCCHC11Q5TAX3 1644 aaKnown RBP32.33■■■□□ 2.77
CSNK1E-207ENST00000430335 ASXL2Q76L83 1435 aa32.3■■■□□ 2.76
CSNK1E-207ENST00000430335 NUP153P49790 1475 aaKnown RBP32.29■■■□□ 2.76
CSNK1E-207ENST00000430335 ATP10BO94823 1461 aa32.28■■■□□ 2.76
CSNK1E-207ENST00000430335 ABCC10Q5T3U5 1492 aa32.26■■■□□ 2.75
CSNK1E-207ENST00000430335 ARID3CA6NKF2 412 aa32.2■■■□□ 2.75
CSNK1E-207ENST00000430335 WDR7Q9Y4E6 1490 aa32.18■■■□□ 2.74
CSNK1E-207ENST00000430335 DIP2BQ9P265 1576 aa32.18■■■□□ 2.74
CSNK1E-207ENST00000430335 HECW1Q76N89 1606 aa32.17■■■□□ 2.74
CSNK1E-207ENST00000430335 CASKIN1Q8WXD9 1431 aa32.17■■■□□ 2.74
CSNK1E-207ENST00000430335 FAM69CQ0P6D2 419 aa32.16■■■□□ 2.74
CSNK1E-207ENST00000430335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.12■■■□□ 2.73
CSNK1E-207ENST00000430335 HNRNPUL2Q1KMD3 747 aaKnown RBP32.12■■■□□ 2.73
CSNK1E-207ENST00000430335 KIF13AQ9H1H9 1805 aa32.12■■■□□ 2.73
CSNK1E-207ENST00000430335 EPRSP07814 1512 aaKnown RBP32.11■■■□□ 2.73
CSNK1E-207ENST00000430335 ATP1B4Q9UN42 357 aaPredicted RBP32.11■■■□□ 2.73
CSNK1E-207ENST00000430335 PCF11O94913 1555 aaKnown RBP32.1■■■□□ 2.73
CSNK1E-207ENST00000430335 FYCO1Q9BQS8 1478 aa32.1■■■□□ 2.73
CSNK1E-207ENST00000430335 GLI2P10070 1586 aa32.09■■■□□ 2.73
CSNK1E-207ENST00000430335 CDK13Q14004 1512 aaKnown RBP32.06■■■□□ 2.72
CSNK1E-207ENST00000430335 PLEKHD1A6NEE1 506 aa32.04■■■□□ 2.72
CSNK1E-207ENST00000430335 CCDC18Q5T9S5 1454 aa32.01■■■□□ 2.71
CSNK1E-207ENST00000430335 KCNH8Q96L42 1107 aa32■■■□□ 2.71
CSNK1E-207ENST00000430335 CDK11AQ9UQ88 783 aaPredicted RBP31.98■■■□□ 2.71
CSNK1E-207ENST00000430335 VPS8Q8N3P4 1428 aa31.97■■■□□ 2.71
CSNK1E-207ENST00000430335 LRRIQ1Q96JM4 1722 aa31.95■■■□□ 2.7
CSNK1E-207ENST00000430335 MAP3K4Q9Y6R4 1608 aa31.9■■■□□ 2.7
CSNK1E-207ENST00000430335 TROQ12816 1431 aaPredicted RBP31.86■■■□□ 2.69
CSNK1E-207ENST00000430335 CD109Q6YHK3 1445 aa31.86■■■□□ 2.69
CSNK1E-207ENST00000430335 CFAP43Q8NDM7 1665 aa31.86■■■□□ 2.69
CSNK1E-207ENST00000430335 ABCA9Q8IUA7 1624 aa31.85■■■□□ 2.69
CSNK1E-207ENST00000430335 MAGI3Q5TCQ9 1506 aa31.8■■■□□ 2.68
CSNK1E-207ENST00000430335 TSPOAP1O95153 1857 aa31.8■■■□□ 2.68
CSNK1E-207ENST00000430335 PPRC1Q5VV67 1664 aaKnown RBP31.8■■■□□ 2.68
CSNK1E-207ENST00000430335 TEX14Q8IWB6 1497 aa31.78■■■□□ 2.68
CSNK1E-207ENST00000430335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.77■■■□□ 2.68
CSNK1E-207ENST00000430335 KIF14Q15058 1648 aa31.72■■■□□ 2.67
CSNK1E-207ENST00000430335 TTC37Q6PGP7 1564 aa31.7■■■□□ 2.67
CSNK1E-207ENST00000430335 MTUS2Q5JR59 1369 aa31.69■■■□□ 2.66
CSNK1E-207ENST00000430335 MAP3K1Q13233 1512 aa31.69■■■□□ 2.66
CSNK1E-207ENST00000430335 TIAM1Q13009 1591 aa31.68■■■□□ 2.66
CSNK1E-207ENST00000430335 EHBP1L1Q8N3D4 1523 aa31.64■■■□□ 2.66
CSNK1E-207ENST00000430335 PLCH2O75038 1416 aa31.63■■■□□ 2.65
CSNK1E-207ENST00000430335 PHLDB1Q86UU1 1377 aa31.62■■■□□ 2.65
CSNK1E-207ENST00000430335 NEO1Q92859 1461 aa31.6■■■□□ 2.65
CSNK1E-207ENST00000430335 ARAP3Q8WWN8 1544 aa31.59■■■□□ 2.65
CSNK1E-207ENST00000430335 KDM6BO15054 1643 aa31.57■■■□□ 2.64
CSNK1E-207ENST00000430335 APLP2Q06481 763 aa31.57■■■□□ 2.64
CSNK1E-207ENST00000430335 LRRC9Q6ZRR7 1453 aa31.56■■■□□ 2.64
CSNK1E-207ENST00000430335 FANCAO15360 1455 aa31.54■■■□□ 2.64
CSNK1E-207ENST00000430335 COL17A1Q9UMD9 1497 aaPredicted RBP31.53■■■□□ 2.64
CSNK1E-207ENST00000430335 MYO5CQ9NQX4 1742 aa31.53■■■□□ 2.64
CSNK1E-207ENST00000430335 CFAP74Q9C0B2 1584 aa31.51■■■□□ 2.63
CSNK1E-207ENST00000430335 KANK4Q5T7N3 995 aaPredicted RBP31.5■■■□□ 2.63
CSNK1E-207ENST00000430335 EFCAB2Q5VUJ9 269 aa31.5■■■□□ 2.63
CSNK1E-207ENST00000430335 AKNAQ7Z591 1439 aa31.49■■■□□ 2.63
CSNK1E-207ENST00000430335 GPATCH8Q9UKJ3 1502 aaKnown RBP31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms