RNA–Protein interactions for RNA: ENST00000430117.6

CALCOCO1-202, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5 BASIC

Gene CALCOCO1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-202ENST00000430117 ZMYND15Q9H091 742 aa15.19■□□□□ 0.02
CALCOCO1-202ENST00000430117 B4GALNT3Q6L9W6 998 aa15.19■□□□□ 0.02
CALCOCO1-202ENST00000430117 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-202ENST00000430117 SOGA1O94964 1423 aa15.15■□□□□ 0.02
CALCOCO1-202ENST00000430117 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
CALCOCO1-202ENST00000430117 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
CALCOCO1-202ENST00000430117 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
CALCOCO1-202ENST00000430117 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO1-202ENST00000430117 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
CALCOCO1-202ENST00000430117 NEFMP07197 916 aa15.12■□□□□ 0.01
CALCOCO1-202ENST00000430117 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
CALCOCO1-202ENST00000430117 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
CALCOCO1-202ENST00000430117 UBTFP17480 764 aaKnown RBP15.1■□□□□ 0.01
CALCOCO1-202ENST00000430117 GLIPR1L2Q4G1C9 344 aa15.1■□□□□ 0.01
CALCOCO1-202ENST00000430117 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
CALCOCO1-202ENST00000430117 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
CALCOCO1-202ENST00000430117 PPP4R2Q9NY27 417 aa15.08■□□□□ 0
CALCOCO1-202ENST00000430117 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
CALCOCO1-202ENST00000430117 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
CALCOCO1-202ENST00000430117 NPM2Q86SE8 214 aaKnown RBP15.06■□□□□ 0
CALCOCO1-202ENST00000430117 SYNJ1O43426 1573 aa15.05■□□□□ -0
CALCOCO1-202ENST00000430117 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
CALCOCO1-202ENST00000430117 ANP32CO43423 234 aa15.03■□□□□ -0
CALCOCO1-202ENST00000430117 DHX57Q6P158 1386 aaKnown RBP15.03■□□□□ -0
CALCOCO1-202ENST00000430117 RSPH6AQ9H0K4 717 aa15.02■□□□□ -0
CALCOCO1-202ENST00000430117 C11orf95C9JLR9 678 aaPredicted RBP15.02□□□□□ -0.01
CALCOCO1-202ENST00000430117 EEA1Q15075 1411 aa15□□□□□ -0.01
CALCOCO1-202ENST00000430117 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
CALCOCO1-202ENST00000430117 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.01
CALCOCO1-202ENST00000430117 NESP48681 1621 aa14.94□□□□□ -0.02
CALCOCO1-202ENST00000430117 CCER2I3L3R5 266 aa14.94□□□□□ -0.02
CALCOCO1-202ENST00000430117 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
CALCOCO1-202ENST00000430117 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
CALCOCO1-202ENST00000430117 GSE1Q14687 1217 aa14.92□□□□□ -0.02
CALCOCO1-202ENST00000430117 PPP1R15AO75807 674 aaPredicted RBP14.91□□□□□ -0.02
CALCOCO1-202ENST00000430117 CFTRP13569 1480 aa14.89□□□□□ -0.03
CALCOCO1-202ENST00000430117 GOLGA3Q08378 1498 aa14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 HSP90AA2PQ14568 343 aaPredicted RBP14.84□□□□□ -0.03
CALCOCO1-202ENST00000430117 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
CALCOCO1-202ENST00000430117 RBM10P98175 930 aaKnown RBP14.83□□□□□ -0.04
CALCOCO1-202ENST00000430117 CUX1P39880 1505 aa14.83□□□□□ -0.04
CALCOCO1-202ENST00000430117 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
CALCOCO1-202ENST00000430117 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
CALCOCO1-202ENST00000430117 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
CALCOCO1-202ENST00000430117 KIF21BO75037 1637 aa14.79□□□□□ -0.04
CALCOCO1-202ENST00000430117 RAPGEF2Q9Y4G8 1499 aa14.79□□□□□ -0.04
CALCOCO1-202ENST00000430117 DCAF11Q8TEB1 546 aa14.79□□□□□ -0.04
CALCOCO1-202ENST00000430117 NAP1L5Q96NT1 182 aaPredicted RBP14.79□□□□□ -0.04
CALCOCO1-202ENST00000430117 ARID4BQ4LE39 1312 aaPredicted RBP14.75□□□□□ -0.05
CALCOCO1-202ENST00000430117 NFKBIBQ15653 356 aa14.75□□□□□ -0.05
CALCOCO1-202ENST00000430117 PDE4CQ08493 712 aa14.74□□□□□ -0.05
CALCOCO1-202ENST00000430117 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
CALCOCO1-202ENST00000430117 FAM9BQ8IZU0 186 aa14.74□□□□□ -0.05
CALCOCO1-202ENST00000430117 AAMPQ13685 434 aa14.73□□□□□ -0.05
CALCOCO1-202ENST00000430117 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
CALCOCO1-202ENST00000430117 FGD1P98174 961 aa14.73□□□□□ -0.05
CALCOCO1-202ENST00000430117 RRAGDQ9NQL2 400 aaPredicted RBP14.73□□□□□ -0.05
CALCOCO1-202ENST00000430117 HSP90AA1P07900 732 aaKnown RBP14.72□□□□□ -0.05
CALCOCO1-202ENST00000430117 CLIP1P30622 1438 aa14.72□□□□□ -0.05
CALCOCO1-202ENST00000430117 SENP3-EIF4A1A0A087X0R7 540 aa14.71□□□□□ -0.06
CALCOCO1-202ENST00000430117 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
CALCOCO1-202ENST00000430117 CCDC184Q52MB2 194 aa14.69□□□□□ -0.06
CALCOCO1-202ENST00000430117 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
CALCOCO1-202ENST00000430117 ARXQ96QS3 562 aa14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 RRP9O43818 475 aaKnown RBP14.67□□□□□ -0.06
CALCOCO1-202ENST00000430117 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
CALCOCO1-202ENST00000430117 BCL11BQ9C0K0 894 aaPredicted RBP14.65□□□□□ -0.07
CALCOCO1-202ENST00000430117 PDE4AP27815 886 aa14.64□□□□□ -0.07
CALCOCO1-202ENST00000430117 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
CALCOCO1-202ENST00000430117 ERICH3Q5RHP9 1530 aa14.62□□□□□ -0.07
CALCOCO1-202ENST00000430117 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
CALCOCO1-202ENST00000430117 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
CALCOCO1-202ENST00000430117 CUX2O14529 1486 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 PNNQ9H307 717 aaKnown RBP14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 AKNAQ7Z591 1439 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 RGS3P49796 1198 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 VPS8Q8N3P4 1428 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.07
CALCOCO1-202ENST00000430117 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.08
CALCOCO1-202ENST00000430117 IGF1RP08069 1367 aa14.57□□□□□ -0.08
CALCOCO1-202ENST00000430117 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
CALCOCO1-202ENST00000430117 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
CALCOCO1-202ENST00000430117 MRS2Q9HD23 443 aa14.55□□□□□ -0.08
CALCOCO1-202ENST00000430117 SKAP1Q86WV1 359 aa14.55□□□□□ -0.08
CALCOCO1-202ENST00000430117 BACH2Q9BYV9 841 aa14.55□□□□□ -0.08
CALCOCO1-202ENST00000430117 RAB3GAP2Q9H2M9 1393 aa14.53□□□□□ -0.08
CALCOCO1-202ENST00000430117 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
CALCOCO1-202ENST00000430117 ZBED9Q6R2W3 1325 aa14.51□□□□□ -0.09
CALCOCO1-202ENST00000430117 DDRGK1Q96HY6 314 aa14.51□□□□□ -0.09
CALCOCO1-202ENST00000430117 ARAP1Q96P48 1450 aa14.51□□□□□ -0.09
CALCOCO1-202ENST00000430117 RAD54L2Q9Y4B4 1467 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms