RNA–Protein interactions for RNA: ENST00000430117.6

CALCOCO1-202, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5 BASIC

Gene CALCOCO1, Length 2,706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-202ENST00000430117 ZMYND15Q9H091 742 aa15.19■□□□□ 0.02
CALCOCO1-202ENST00000430117 B4GALNT3Q6L9W6 998 aa15.19■□□□□ 0.02
CALCOCO1-202ENST00000430117 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-202ENST00000430117 SOGA1O94964 1423 aa15.15■□□□□ 0.02
CALCOCO1-202ENST00000430117 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
CALCOCO1-202ENST00000430117 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
CALCOCO1-202ENST00000430117 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
CALCOCO1-202ENST00000430117 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO1-202ENST00000430117 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
CALCOCO1-202ENST00000430117 NEFMP07197 916 aa15.12■□□□□ 0.01
CALCOCO1-202ENST00000430117 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
CALCOCO1-202ENST00000430117 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
CALCOCO1-202ENST00000430117 UBTFP17480 764 aaKnown RBP15.1■□□□□ 0.01
CALCOCO1-202ENST00000430117 GLIPR1L2Q4G1C9 344 aa15.1■□□□□ 0.01
CALCOCO1-202ENST00000430117 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
CALCOCO1-202ENST00000430117 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
CALCOCO1-202ENST00000430117 PPP4R2Q9NY27 417 aa15.08■□□□□ 0
CALCOCO1-202ENST00000430117 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
CALCOCO1-202ENST00000430117 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
CALCOCO1-202ENST00000430117 NPM2Q86SE8 214 aaKnown RBP15.06■□□□□ 0
CALCOCO1-202ENST00000430117 SYNJ1O43426 1573 aa15.05■□□□□ -0
CALCOCO1-202ENST00000430117 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
CALCOCO1-202ENST00000430117 ANP32CO43423 234 aa15.03■□□□□ -0
CALCOCO1-202ENST00000430117 DHX57Q6P158 1386 aaKnown RBP15.03■□□□□ -0
CALCOCO1-202ENST00000430117 RSPH6AQ9H0K4 717 aa15.02■□□□□ -0
CALCOCO1-202ENST00000430117 C11orf95C9JLR9 678 aaPredicted RBP15.02□□□□□ -0.01
CALCOCO1-202ENST00000430117 EEA1Q15075 1411 aa15□□□□□ -0.01
CALCOCO1-202ENST00000430117 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
CALCOCO1-202ENST00000430117 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.01
CALCOCO1-202ENST00000430117 NESP48681 1621 aa14.94□□□□□ -0.02
CALCOCO1-202ENST00000430117 CCER2I3L3R5 266 aa14.94□□□□□ -0.02
CALCOCO1-202ENST00000430117 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
CALCOCO1-202ENST00000430117 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
CALCOCO1-202ENST00000430117 GSE1Q14687 1217 aa14.92□□□□□ -0.02
CALCOCO1-202ENST00000430117 PPP1R15AO75807 674 aaPredicted RBP14.91□□□□□ -0.02
CALCOCO1-202ENST00000430117 CFTRP13569 1480 aa14.89□□□□□ -0.03
CALCOCO1-202ENST00000430117 GOLGA3Q08378 1498 aa14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-202ENST00000430117 HSP90AA2PQ14568 343 aaPredicted RBP14.84□□□□□ -0.03
CALCOCO1-202ENST00000430117 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
CALCOCO1-202ENST00000430117 RBM10P98175 930 aaKnown RBP14.83□□□□□ -0.04
CALCOCO1-202ENST00000430117 CUX1P39880 1505 aa14.83□□□□□ -0.04
CALCOCO1-202ENST00000430117 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
CALCOCO1-202ENST00000430117 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
CALCOCO1-202ENST00000430117 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
CALCOCO1-202ENST00000430117 KIF21BO75037 1637 aa14.79□□□□□ -0.04
CALCOCO1-202ENST00000430117 RAPGEF2Q9Y4G8 1499 aa14.79□□□□□ -0.04
CALCOCO1-202ENST00000430117 DCAF11Q8TEB1 546 aa14.79□□□□□ -0.04
CALCOCO1-202ENST00000430117 NAP1L5Q96NT1 182 aaPredicted RBP14.79□□□□□ -0.04
CALCOCO1-202ENST00000430117 ARID4BQ4LE39 1312 aaPredicted RBP14.75□□□□□ -0.05
CALCOCO1-202ENST00000430117 NFKBIBQ15653 356 aa14.75□□□□□ -0.05
CALCOCO1-202ENST00000430117 PDE4CQ08493 712 aa14.74□□□□□ -0.05
CALCOCO1-202ENST00000430117 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
CALCOCO1-202ENST00000430117 FAM9BQ8IZU0 186 aa14.74□□□□□ -0.05
CALCOCO1-202ENST00000430117 AAMPQ13685 434 aa14.73□□□□□ -0.05
CALCOCO1-202ENST00000430117 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
CALCOCO1-202ENST00000430117 FGD1P98174 961 aa14.73□□□□□ -0.05
CALCOCO1-202ENST00000430117 RRAGDQ9NQL2 400 aaPredicted RBP14.73□□□□□ -0.05
CALCOCO1-202ENST00000430117 HSP90AA1P07900 732 aaKnown RBP14.72□□□□□ -0.05
CALCOCO1-202ENST00000430117 CLIP1P30622 1438 aa14.72□□□□□ -0.05
CALCOCO1-202ENST00000430117 SENP3-EIF4A1A0A087X0R7 540 aa14.71□□□□□ -0.06
CALCOCO1-202ENST00000430117 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
CALCOCO1-202ENST00000430117 CCDC184Q52MB2 194 aa14.69□□□□□ -0.06
CALCOCO1-202ENST00000430117 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
CALCOCO1-202ENST00000430117 ARXQ96QS3 562 aa14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
CALCOCO1-202ENST00000430117 RRP9O43818 475 aaKnown RBP14.67□□□□□ -0.06
CALCOCO1-202ENST00000430117 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
CALCOCO1-202ENST00000430117 BCL11BQ9C0K0 894 aaPredicted RBP14.65□□□□□ -0.07
CALCOCO1-202ENST00000430117 PDE4AP27815 886 aa14.64□□□□□ -0.07
CALCOCO1-202ENST00000430117 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
CALCOCO1-202ENST00000430117 ERICH3Q5RHP9 1530 aa14.62□□□□□ -0.07
CALCOCO1-202ENST00000430117 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
CALCOCO1-202ENST00000430117 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
CALCOCO1-202ENST00000430117 CUX2O14529 1486 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 PNNQ9H307 717 aaKnown RBP14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 AKNAQ7Z591 1439 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 RGS3P49796 1198 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 VPS8Q8N3P4 1428 aa14.61□□□□□ -0.07
CALCOCO1-202ENST00000430117 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.07
CALCOCO1-202ENST00000430117 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.08
CALCOCO1-202ENST00000430117 IGF1RP08069 1367 aa14.57□□□□□ -0.08
CALCOCO1-202ENST00000430117 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
CALCOCO1-202ENST00000430117 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
CALCOCO1-202ENST00000430117 MRS2Q9HD23 443 aa14.55□□□□□ -0.08
CALCOCO1-202ENST00000430117 SKAP1Q86WV1 359 aa14.55□□□□□ -0.08
CALCOCO1-202ENST00000430117 BACH2Q9BYV9 841 aa14.55□□□□□ -0.08
CALCOCO1-202ENST00000430117 RAB3GAP2Q9H2M9 1393 aa14.53□□□□□ -0.08
CALCOCO1-202ENST00000430117 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
CALCOCO1-202ENST00000430117 ZBED9Q6R2W3 1325 aa14.51□□□□□ -0.09
CALCOCO1-202ENST00000430117 DDRGK1Q96HY6 314 aa14.51□□□□□ -0.09
CALCOCO1-202ENST00000430117 ARAP1Q96P48 1450 aa14.51□□□□□ -0.09
CALCOCO1-202ENST00000430117 RAD54L2Q9Y4B4 1467 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms