RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 ZEB1P37275 1124 aaPredicted RBP15.41■□□□□ 0.06
RPE-206ENST00000429921 ABCA10Q8WWZ4 1543 aa15.39■□□□□ 0.05
RPE-206ENST00000429921 MSH5O43196 834 aa15.37■□□□□ 0.05
RPE-206ENST00000429921 ITGAEP38570 1179 aa15.36■□□□□ 0.05
RPE-206ENST00000429921 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■□□□ 13.2
RPE-206ENST00000429921 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
RPE-206ENST00000429921 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
RPE-206ENST00000429921 WDR97A6NE52 1622 aa15.27■□□□□ 0.03
RPE-206ENST00000429921 ARID3CA6NKF2 412 aa15.23■□□□□ 0.03
RPE-206ENST00000429921 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
RPE-206ENST00000429921 ZNF608Q9ULD9 1512 aaPredicted RBP15.23■□□□□ 0.03
RPE-206ENST00000429921 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
RPE-206ENST00000429921 MRC2Q9UBG0 1479 aa15.23■□□□□ 0.03
RPE-206ENST00000429921 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
RPE-206ENST00000429921 CUL7Q14999 1698 aa15.21■□□□□ 0.02
RPE-206ENST00000429921 PCF11O94913 1555 aaKnown RBP15.18■□□□□ 0.02
RPE-206ENST00000429921 FBLN2P98095 1184 aa15.17■□□□□ 0.02
RPE-206ENST00000429921 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
RPE-206ENST00000429921 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
RPE-206ENST00000429921 TIAM1Q13009 1591 aa15.14■□□□□ 0.01
RPE-206ENST00000429921 PBRM1Q86U86 1689 aa15.13■□□□□ 0.01
RPE-206ENST00000429921 PHLDB1Q86UU1 1377 aa15.12■□□□□ 0.01
RPE-206ENST00000429921 CCNB3Q8WWL7 1395 aa15.12■□□□□ 0.01
RPE-206ENST00000429921 LRRC9Q6ZRR7 1453 aa15.11■□□□□ 0.01
RPE-206ENST00000429921 FHAD1B1AJZ9 1412 aa15.11■□□□□ 0.01
RPE-206ENST00000429921 RRBP1Q9P2E9 1410 aaKnown RBP15.08■□□□□ 0
RPE-206ENST00000429921 WDR62O43379 1518 aa15.07■□□□□ 0
RPE-206ENST00000429921 GRIN2BQ13224 1484 aa15.07■□□□□ 0
RPE-206ENST00000429921 IFT140Q96RY7 1462 aa15.06■□□□□ 0
RPE-206ENST00000429921 SNAPC4Q5SXM2 1469 aa15.05■□□□□ 0
RPE-206ENST00000429921 EFCAB5A4FU69 1503 aa15.05■□□□□ -0
RPE-206ENST00000429921 CASKIN1Q8WXD9 1431 aa15.04■□□□□ -0
RPE-206ENST00000429921 ADAMTS12P58397 1594 aa15.04■□□□□ -0
RPE-206ENST00000429921 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
RPE-206ENST00000429921 FMN1Q68DA7 1419 aa15.02□□□□□ -0.01
RPE-206ENST00000429921 FYCO1Q9BQS8 1478 aa15.02□□□□□ -0.01
RPE-206ENST00000429921 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
RPE-206ENST00000429921 MTUS2Q5JR59 1369 aa15.01□□□□□ -0.01
RPE-206ENST00000429921 LRRIQ1Q96JM4 1722 aa15.01□□□□□ -0.01
RPE-206ENST00000429921 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
RPE-206ENST00000429921 SAMD9Q5K651 1589 aa15□□□□□ -0.01
RPE-206ENST00000429921 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
RPE-206ENST00000429921 CFAP43Q8NDM7 1665 aa15□□□□□ -0.01
RPE-206ENST00000429921 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
RPE-206ENST00000429921 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
RPE-206ENST00000429921 RAB3GAP2Q9H2M9 1393 aa14.97□□□□□ -0.01
RPE-206ENST00000429921 DIEXFQ68CQ4 756 aaKnown RBP14.96□□□□□ -0.02
RPE-206ENST00000429921 CDK13Q14004 1512 aaKnown RBP14.93□□□□□ -0.02
RPE-206ENST00000429921 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
RPE-206ENST00000429921 ZNF316A6NFI3 1004 aaPredicted RBP14.92□□□□□ -0.02
RPE-206ENST00000429921 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
RPE-206ENST00000429921 CHIC2Q9UKJ5 165 aa14.92□□□□□ -0.02
RPE-206ENST00000429921 NEUROD1Q13562 356 aa14.91□□□□□ -0.02
RPE-206ENST00000429921 SIN3AQ96ST3 1273 aa14.9□□□□□ -0.02
RPE-206ENST00000429921 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
RPE-206ENST00000429921 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
RPE-206ENST00000429921 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
RPE-206ENST00000429921 DISP1Q96F81 1524 aa14.87□□□□□ -0.03
RPE-206ENST00000429921 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
RPE-206ENST00000429921 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
RPE-206ENST00000429921 PTPRKQ15262 1439 aa14.86□□□□□ -0.03
RPE-206ENST00000429921 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
RPE-206ENST00000429921 RRP7BPQ9NSQ0 103 aa14.86□□□□□ -0.03
RPE-206ENST00000429921 EPRSP07814 1512 aaKnown RBP14.85□□□□□ -0.03
RPE-206ENST00000429921 SYNJ2O15056 1496 aa14.84□□□□□ -0.03
RPE-206ENST00000429921 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
RPE-206ENST00000429921 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
RPE-206ENST00000429921 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
RPE-206ENST00000429921 ZNF644Q9H582 1327 aaPredicted RBP14.81□□□□□ -0.04
RPE-206ENST00000429921 MYOM3Q5VTT5 1437 aa14.81□□□□□ -0.04
RPE-206ENST00000429921 PLB1Q6P1J6 1458 aa14.81□□□□□ -0.04
RPE-206ENST00000429921 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
RPE-206ENST00000429921 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
RPE-206ENST00000429921 MAPKBP1O60336 1514 aa14.78□□□□□ -0.04
RPE-206ENST00000429921 EHBP1L1Q8N3D4 1523 aa14.78□□□□□ -0.04
RPE-206ENST00000429921 ZNF777Q9ULD5 760 aaPredicted RBP14.77□□□□□ -0.04
RPE-206ENST00000429921 NUP153P49790 1475 aaKnown RBP14.77□□□□□ -0.04
RPE-206ENST00000429921 CCDC18Q5T9S5 1454 aa14.77□□□□□ -0.05
RPE-206ENST00000429921 PRG4Q92954 1404 aaPredicted RBP14.76□□□□□ -0.05
RPE-206ENST00000429921 MIER1Q8N108 512 aa14.75□□□□□ -0.05
RPE-206ENST00000429921 PTPN23Q9H3S7 1636 aa14.75□□□□□ -0.05
RPE-206ENST00000429921 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
RPE-206ENST00000429921 POTEDQ86YR6 584 aa14.74□□□□□ -0.05
RPE-206ENST00000429921 HIRIP3Q9BW71 556 aaPredicted RBP14.74□□□□□ -0.05
RPE-206ENST00000429921 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
RPE-206ENST00000429921 RAPGEF6Q8TEU7 1601 aa14.73□□□□□ -0.05
RPE-206ENST00000429921 TRIM52Q96A61 297 aa14.73□□□□□ -0.05
RPE-206ENST00000429921 NUP160Q12769 1436 aa14.72□□□□□ -0.05
RPE-206ENST00000429921 CARMIL2Q6F5E8 1435 aa14.7□□□□□ -0.06
RPE-206ENST00000429921 ARHGEF11O15085 1522 aa14.7□□□□□ -0.06
RPE-206ENST00000429921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.06
RPE-206ENST00000429921 NAIPQ13075 1403 aa14.69□□□□□ -0.06
RPE-206ENST00000429921 CDK11AQ9UQ88 783 aaPredicted RBP14.68□□□□□ -0.06
RPE-206ENST00000429921 CHD1O14646 1710 aa14.67□□□□□ -0.06
RPE-206ENST00000429921 KDM6BO15054 1643 aa14.67□□□□□ -0.06
RPE-206ENST00000429921 CFDP1Q9UEE9 299 aaPredicted RBP14.66□□□□□ -0.06
RPE-206ENST00000429921 HFM1A2PYH4 1435 aa14.65□□□□□ -0.06
RPE-206ENST00000429921 KIF14Q15058 1648 aa14.64□□□□□ -0.07
RPE-206ENST00000429921 PLEKHD1A6NEE1 506 aa14.63□□□□□ -0.07
RPE-206ENST00000429921 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms