RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 UNC13AQ9UPW8 1703 aa9.93□□□□□ -0.82
ATXN3-204ENST00000429774 KDM2AQ9Y2K7 1162 aa9.93□□□□□ -0.82
ATXN3-204ENST00000429774 DIEXFQ68CQ4 756 aaKnown RBP9.92□□□□□ -0.82
ATXN3-204ENST00000429774 GTF3C3Q9Y5Q9 886 aa9.91□□□□□ -0.82
ATXN3-204ENST00000429774 CFDP1Q9UEE9 299 aaPredicted RBP9.9□□□□□ -0.83
ATXN3-204ENST00000429774 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
ATXN3-204ENST00000429774 SCAF1Q9H7N4 1312 aaKnown RBP9.89□□□□□ -0.83
ATXN3-204ENST00000429774 TONSLQ96HA7 1378 aa9.88□□□□□ -0.83
ATXN3-204ENST00000429774 ANP32CO43423 234 aa9.87□□□□□ -0.83
ATXN3-204ENST00000429774 MLECQ14165 292 aa9.86□□□□□ -0.83
ATXN3-204ENST00000429774 TNIKQ9UKE5 1360 aa9.85□□□□□ -0.83
ATXN3-204ENST00000429774 PPP1R15AO75807 674 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-204ENST00000429774 CARMIL2Q6F5E8 1435 aa9.83□□□□□ -0.84
ATXN3-204ENST00000429774 RTL5Q5HYW3 569 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-204ENST00000429774 NESP48681 1621 aa9.82□□□□□ -0.84
ATXN3-204ENST00000429774 RGL3Q3MIN7 710 aa9.82□□□□□ -0.84
ATXN3-204ENST00000429774 C14orf37Q86TY3 774 aa9.82□□□□□ -0.84
ATXN3-204ENST00000429774 ZBTB7CA1YPR0 619 aa9.81□□□□□ -0.84
ATXN3-204ENST00000429774 BCL11AQ9H165 835 aa9.81□□□□□ -0.84
ATXN3-204ENST00000429774 CCNB3Q8WWL7 1395 aa9.81□□□□□ -0.84
ATXN3-204ENST00000429774 RAD54L2Q9Y4B4 1467 aa9.8□□□□□ -0.84
ATXN3-204ENST00000429774 PRDM2Q13029 1718 aa9.8□□□□□ -0.84
ATXN3-204ENST00000429774 NEFMP07197 916 aa9.79□□□□□ -0.84
ATXN3-204ENST00000429774 ZNF316A6NFI3 1004 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-204ENST00000429774 FHAD1B1AJZ9 1412 aa9.78□□□□□ -0.84
ATXN3-204ENST00000429774 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-204ENST00000429774 CYB5RLQ6IPT4 315 aa9.78□□□□□ -0.84
ATXN3-204ENST00000429774 FGD5Q6ZNL6 1462 aa9.78□□□□□ -0.84
ATXN3-204ENST00000429774 HIRIP3Q9BW71 556 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-204ENST00000429774 RAPGEF2Q9Y4G8 1499 aa9.76□□□□□ -0.85
ATXN3-204ENST00000429774 BICRAQ9NZM4 1560 aa9.76□□□□□ -0.85
ATXN3-204ENST00000429774 NCAPD3P42695 1498 aa9.76□□□□□ -0.85
ATXN3-204ENST00000429774 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
ATXN3-204ENST00000429774 RUSC2Q8N2Y8 1516 aa9.75□□□□□ -0.85
ATXN3-204ENST00000429774 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
ATXN3-204ENST00000429774 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
ATXN3-204ENST00000429774 AQRO60306 1485 aaKnown RBP eCLIP9.74□□□□□ -0.85
ATXN3-204ENST00000429774 ACIN1Q9UKV3 1341 aaKnown RBP9.73□□□□□ -0.85
ATXN3-204ENST00000429774 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
ATXN3-204ENST00000429774 A0A0G2JS52 829 aa9.73□□□□□ -0.85
ATXN3-204ENST00000429774 FHOD3Q2V2M9 1422 aa9.73□□□□□ -0.85
ATXN3-204ENST00000429774 CANXP27824 592 aaKnown RBP9.73□□□□□ -0.85
ATXN3-204ENST00000429774 CLSPNQ9HAW4 1339 aa9.73□□□□□ -0.85
ATXN3-204ENST00000429774 GGT6Q6P531 493 aa9.71□□□□□ -0.85
ATXN3-204ENST00000429774 ARHGAP35Q9NRY4 1499 aa9.71□□□□□ -0.86
ATXN3-204ENST00000429774 DDX10Q13206 875 aaKnown RBP9.7□□□□□ -0.86
ATXN3-204ENST00000429774 MRC2Q9UBG0 1479 aa9.7□□□□□ -0.86
ATXN3-204ENST00000429774 TMC1Q8TDI8 760 aa9.7□□□□□ -0.86
ATXN3-204ENST00000429774 SALL2Q9Y467 1007 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-204ENST00000429774 KANK4Q5T7N3 995 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-204ENST00000429774 KANK1Q14678 1352 aa9.68□□□□□ -0.86
ATXN3-204ENST00000429774 HNRNPMP52272 730 aaKnown RBP eCLIP9.68□□□□□ -0.86
ATXN3-204ENST00000429774 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-204ENST00000429774 FMN1Q68DA7 1419 aa9.67□□□□□ -0.86
ATXN3-204ENST00000429774 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
ATXN3-204ENST00000429774 FAM9BQ8IZU0 186 aa9.66□□□□□ -0.86
ATXN3-204ENST00000429774 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
ATXN3-204ENST00000429774 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-204ENST00000429774 LMOD2Q6P5Q4 547 aa9.64□□□□□ -0.87
ATXN3-204ENST00000429774 FOXD1Q16676 465 aa9.63□□□□□ -0.87
ATXN3-204ENST00000429774 SIN3AQ96ST3 1273 aa9.63□□□□□ -0.87
ATXN3-204ENST00000429774 PTPRGP23470 1445 aa9.63□□□□□ -0.87
ATXN3-204ENST00000429774 VPS8Q8N3P4 1428 aa9.63□□□□□ -0.87
ATXN3-204ENST00000429774 POGKQ9P215 609 aa9.63□□□□□ -0.87
ATXN3-204ENST00000429774 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
ATXN3-204ENST00000429774 EFCAB2Q5VUJ9 269 aa9.63□□□□□ -0.87
ATXN3-204ENST00000429774 CFTRP13569 1480 aa9.61□□□□□ -0.87
ATXN3-204ENST00000429774 CARD11Q9BXL7 1154 aa9.6□□□□□ -0.87
ATXN3-204ENST00000429774 EIF4G2P78344 907 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATXN3-204ENST00000429774 SAFB2Q14151 953 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATXN3-204ENST00000429774 PPM1GO15355 546 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-204ENST00000429774 WDR43Q15061 677 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATXN3-204ENST00000429774 TOPBP1Q92547 1522 aa9.59□□□□□ -0.87
ATXN3-204ENST00000429774 DCAF11Q8TEB1 546 aa9.59□□□□□ -0.87
ATXN3-204ENST00000429774 FAM69CQ0P6D2 419 aa9.59□□□□□ -0.87
ATXN3-204ENST00000429774 CCDC18Q5T9S5 1454 aa9.59□□□□□ -0.87
ATXN3-204ENST00000429774 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-204ENST00000429774 STK26Q9P289 416 aa9.59□□□□□ -0.87
ATXN3-204ENST00000429774 GRIN2BQ13224 1484 aa9.59□□□□□ -0.87
ATXN3-204ENST00000429774 CUX1P39880 1505 aa9.58□□□□□ -0.88
ATXN3-204ENST00000429774 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
ATXN3-204ENST00000429774 SNAPC4Q5SXM2 1469 aa9.58□□□□□ -0.88
ATXN3-204ENST00000429774 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
ATXN3-204ENST00000429774 KIF3BO15066 747 aa9.58□□□□□ -0.88
ATXN3-204ENST00000429774 IGF1RP08069 1367 aa9.58□□□□□ -0.88
ATXN3-204ENST00000429774 GLIPR1L2Q4G1C9 344 aa9.57□□□□□ -0.88
ATXN3-204ENST00000429774 SPAG9O60271 1321 aaKnown RBP9.57□□□□□ -0.88
ATXN3-204ENST00000429774 DNMBPQ6XZF7 1577 aa9.56□□□□□ -0.88
ATXN3-204ENST00000429774 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
ATXN3-204ENST00000429774 PKD2Q13563 968 aa9.56□□□□□ -0.88
ATXN3-204ENST00000429774 HDGFP51858 240 aaKnown RBP9.55□□□□□ -0.88
ATXN3-204ENST00000429774 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-204ENST00000429774 TOP2BQ02880 1626 aa9.55□□□□□ -0.88
ATXN3-204ENST00000429774 HNRNPUQ00839 825 aaKnown RBP eCLIP9.54□□□□□ -0.88
ATXN3-204ENST00000429774 SETD5Q9C0A6 1442 aa9.54□□□□□ -0.88
ATXN3-204ENST00000429774 WASHC2CQ9Y4E1 1318 aa9.54□□□□□ -0.88
ATXN3-204ENST00000429774 ANKRD30AQ9BXX3 1397 aa9.54□□□□□ -0.88
ATXN3-204ENST00000429774 SOX12O15370 315 aa9.53□□□□□ -0.88
ATXN3-204ENST00000429774 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-204ENST00000429774 NUP155O75694 1391 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms