RNA–Protein interactions for RNA: ENST00000429602.6

SIMC1-203, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-203ENST00000429602 LRRC9Q6ZRR7 1453 aa29.39■■■□□ 2.3
SIMC1-203ENST00000429602 MAP3K1Q13233 1512 aa29.39■■■□□ 2.3
SIMC1-203ENST00000429602 POLA1P09884 1462 aaPredicted RBP29.39■■■□□ 2.3
SIMC1-203ENST00000429602 DNMBPQ6XZF7 1577 aa29.38■■■□□ 2.29
SIMC1-203ENST00000429602 TOPBP1Q92547 1522 aa29.38■■■□□ 2.29
SIMC1-203ENST00000429602 PHLDB1Q86UU1 1377 aa29.37■■■□□ 2.29
SIMC1-203ENST00000429602 RAB3GAP2Q9H2M9 1393 aa29.37■■■□□ 2.29
SIMC1-203ENST00000429602 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
SIMC1-203ENST00000429602 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
SIMC1-203ENST00000429602 FHOD3Q2V2M9 1422 aa29.33■■■□□ 2.29
SIMC1-203ENST00000429602 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
SIMC1-203ENST00000429602 PCF11O94913 1555 aaKnown RBP29.31■■■□□ 2.28
SIMC1-203ENST00000429602 SETD5Q9C0A6 1442 aa29.22■■■□□ 2.27
SIMC1-203ENST00000429602 MAPKBP1O60336 1514 aa29.2■■■□□ 2.27
SIMC1-203ENST00000429602 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
SIMC1-203ENST00000429602 URB2Q14146 1524 aaKnown RBP29.16■■■□□ 2.26
SIMC1-203ENST00000429602 TDRD9Q8NDG6 1382 aaKnown RBP29.15■■■□□ 2.26
SIMC1-203ENST00000429602 FYCO1Q9BQS8 1478 aa29.14■■■□□ 2.26
SIMC1-203ENST00000429602 EFCAB5A4FU69 1503 aa29.13■■■□□ 2.25
SIMC1-203ENST00000429602 CASKIN1Q8WXD9 1431 aa29.13■■■□□ 2.25
SIMC1-203ENST00000429602 CUL7Q14999 1698 aa29.12■■■□□ 2.25
SIMC1-203ENST00000429602 DNAJC5BQ9UF47 199 aa29.11■■■□□ 2.25
SIMC1-203ENST00000429602 SIN3AQ96ST3 1273 aa29.08■■■□□ 2.25
SIMC1-203ENST00000429602 LAMC3Q9Y6N6 1575 aa29.06■■■□□ 2.24
SIMC1-203ENST00000429602 AQRO60306 1485 aaKnown RBP eCLIP29.05■■■□□ 2.24
SIMC1-203ENST00000429602 CTTNBP2Q8WZ74 1663 aa29.04■■■□□ 2.24
SIMC1-203ENST00000429602 FMN1Q68DA7 1419 aa29.03■■■□□ 2.24
SIMC1-203ENST00000429602 WDR97A6NE52 1622 aa28.99■■■□□ 2.23
SIMC1-203ENST00000429602 GAPVD1Q14C86 1478 aa28.99■■■□□ 2.23
SIMC1-203ENST00000429602 SNAPC4Q5SXM2 1469 aa28.98■■■□□ 2.23
SIMC1-203ENST00000429602 MTUS2Q5JR59 1369 aa28.96■■■□□ 2.23
SIMC1-203ENST00000429602 PDS5BQ9NTI5 1447 aa28.95■■■□□ 2.23
SIMC1-203ENST00000429602 ABCA5Q8WWZ7 1642 aa28.95■■■□□ 2.22
SIMC1-203ENST00000429602 FGD6Q6ZV73 1430 aa28.93■■■□□ 2.22
SIMC1-203ENST00000429602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.91■■■□□ 2.22
SIMC1-203ENST00000429602 SAMD9Q5K651 1589 aa28.86■■■□□ 2.21
SIMC1-203ENST00000429602 PTPRKQ15262 1439 aa28.82■■■□□ 2.2
SIMC1-203ENST00000429602 KCNH8Q96L42 1107 aa28.82■■■□□ 2.2
SIMC1-203ENST00000429602 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
SIMC1-203ENST00000429602 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
SIMC1-203ENST00000429602 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
SIMC1-203ENST00000429602 NCOA2Q15596 1464 aa28.79■■■□□ 2.2
SIMC1-203ENST00000429602 HIRIP3Q9BW71 556 aaPredicted RBP28.77■■■□□ 2.2
SIMC1-203ENST00000429602 LRRIQ1Q96JM4 1722 aa28.77■■■□□ 2.2
SIMC1-203ENST00000429602 TIMELESSQ9UNS1 1208 aa28.77■■■□□ 2.2
SIMC1-203ENST00000429602 CCDC18Q5T9S5 1454 aa28.76■■■□□ 2.19
SIMC1-203ENST00000429602 PPP1R15AO75807 674 aaPredicted RBP28.75■■■□□ 2.19
SIMC1-203ENST00000429602 MYOM3Q5VTT5 1437 aa28.75■■■□□ 2.19
SIMC1-203ENST00000429602 HFM1A2PYH4 1435 aa28.73■■■□□ 2.19
SIMC1-203ENST00000429602 TARBP1Q13395 1621 aaKnown RBP28.73■■■□□ 2.19
SIMC1-203ENST00000429602 NAIPQ13075 1403 aa28.66■■■□□ 2.18
SIMC1-203ENST00000429602 THOC2Q8NI27 1593 aaKnown RBP28.66■■■□□ 2.18
SIMC1-203ENST00000429602 EHBP1L1Q8N3D4 1523 aa28.66■■■□□ 2.18
SIMC1-203ENST00000429602 UACAQ9BZF9 1416 aa28.65■■■□□ 2.18
SIMC1-203ENST00000429602 PTPN23Q9H3S7 1636 aa28.65■■■□□ 2.18
SIMC1-203ENST00000429602 TONSLQ96HA7 1378 aa28.65■■■□□ 2.18
SIMC1-203ENST00000429602 MAGI3Q5TCQ9 1506 aa28.65■■■□□ 2.18
SIMC1-203ENST00000429602 SUPT6HQ7KZ85 1726 aaKnown RBP28.63■■■□□ 2.17
SIMC1-203ENST00000429602 ARID3CA6NKF2 412 aa28.63■■■□□ 2.17
SIMC1-203ENST00000429602 SUPT16HQ9Y5B9 1047 aaKnown RBP28.62■■■□□ 2.17
SIMC1-203ENST00000429602 CHIC2Q9UKJ5 165 aa28.6■■■□□ 2.17
SIMC1-203ENST00000429602 UGGT2Q9NYU1 1516 aa28.6■■■□□ 2.17
SIMC1-203ENST00000429602 RRP7BPQ9NSQ0 103 aa28.59■■■□□ 2.17
SIMC1-203ENST00000429602 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
SIMC1-203ENST00000429602 IQGAP2Q13576 1575 aa28.55■■■□□ 2.16
SIMC1-203ENST00000429602 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
SIMC1-203ENST00000429602 ADAMTS12P58397 1594 aa28.51■■■□□ 2.16
SIMC1-203ENST00000429602 EPRSP07814 1512 aaKnown RBP28.51■■■□□ 2.15
SIMC1-203ENST00000429602 CDK13Q14004 1512 aaKnown RBP28.5■■■□□ 2.15
SIMC1-203ENST00000429602 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
SIMC1-203ENST00000429602 HECW1Q76N89 1606 aa28.5■■■□□ 2.15
SIMC1-203ENST00000429602 TRIM52Q96A61 297 aa28.45■■■□□ 2.14
SIMC1-203ENST00000429602 TCOF1Q13428 1488 aaKnown RBP28.45■■■□□ 2.14
SIMC1-203ENST00000429602 ZNF608Q9ULD9 1512 aaPredicted RBP28.44■■■□□ 2.14
SIMC1-203ENST00000429602 ANP32CO43423 234 aa28.42■■■□□ 2.14
SIMC1-203ENST00000429602 WDR62O43379 1518 aa28.4■■■□□ 2.14
SIMC1-203ENST00000429602 KDM5BQ9UGL1 1544 aa28.37■■■□□ 2.13
SIMC1-203ENST00000429602 DENND4BO75064 1496 aaPredicted RBP28.36■■■□□ 2.13
SIMC1-203ENST00000429602 KDM6BO15054 1643 aa28.35■■■□□ 2.13
SIMC1-203ENST00000429602 MIA2Q96PC5 1412 aa28.34■■■□□ 2.13
SIMC1-203ENST00000429602 CCER2I3L3R5 266 aa28.34■■■□□ 2.13
SIMC1-203ENST00000429602 IFT140Q96RY7 1462 aa28.33■■■□□ 2.12
SIMC1-203ENST00000429602 FOXD1Q16676 465 aa28.31■■■□□ 2.12
SIMC1-203ENST00000429602 GCC2Q8IWJ2 1684 aa28.3■■■□□ 2.12
SIMC1-203ENST00000429602 MPHOSPH9Q99550 1183 aa28.3■■■□□ 2.12
SIMC1-203ENST00000429602 AKNAQ7Z591 1439 aa28.3■■■□□ 2.12
SIMC1-203ENST00000429602 DISP1Q96F81 1524 aa28.27■■■□□ 2.12
SIMC1-203ENST00000429602 KIAA0586Q9BVV6 1533 aa28.27■■■□□ 2.12
SIMC1-203ENST00000429602 ZNF644Q9H582 1327 aaPredicted RBP28.27■■■□□ 2.12
SIMC1-203ENST00000429602 BCANQ96GW7 911 aa28.24■■■□□ 2.11
SIMC1-203ENST00000429602 KIAA0556O60303 1618 aa28.23■■■□□ 2.11
SIMC1-203ENST00000429602 HSPA5P11021 654 aaKnown RBP28.23■■■□□ 2.11
SIMC1-203ENST00000429602 NUP153P49790 1475 aaKnown RBP28.23■■■□□ 2.11
SIMC1-203ENST00000429602 FKBP8Q14318 412 aa28.2■■■□□ 2.11
SIMC1-203ENST00000429602 DAPK1P53355 1430 aa28.2■■■□□ 2.1
SIMC1-203ENST00000429602 GRIN2AQ12879 1464 aa28.19■■■□□ 2.1
SIMC1-203ENST00000429602 L3MBTL2Q969R5 705 aa28.19■■■□□ 2.1
SIMC1-203ENST00000429602 WASHC2AQ641Q2 1341 aa28.17■■■□□ 2.1
SIMC1-203ENST00000429602 ABCC5O15440 1437 aa28.17■■■□□ 2.1
SIMC1-203ENST00000429602 CDK11AQ9UQ88 783 aaPredicted RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms