RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 CHD1O14646 1710 aa20.13■□□□□ 0.81
TRIM39-207ENST00000428404 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
TRIM39-207ENST00000428404 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
TRIM39-207ENST00000428404 CTTNBP2Q8WZ74 1663 aa20.08■□□□□ 0.81
TRIM39-207ENST00000428404 IQGAP2Q13576 1575 aa20.05■□□□□ 0.8
TRIM39-207ENST00000428404 CLIP1P30622 1438 aa20.05■□□□□ 0.8
TRIM39-207ENST00000428404 OSCARQ8IYS5 282 aa20.02■□□□□ 0.8
TRIM39-207ENST00000428404 JPH4Q96JJ6 628 aa20.01■□□□□ 0.79
TRIM39-207ENST00000428404 UGGT2Q9NYU1 1516 aa20.01■□□□□ 0.79
TRIM39-207ENST00000428404 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
TRIM39-207ENST00000428404 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
TRIM39-207ENST00000428404 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
TRIM39-207ENST00000428404 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
TRIM39-207ENST00000428404 SAMD9Q5K651 1589 aa19.94■□□□□ 0.78
TRIM39-207ENST00000428404 DISP1Q96F81 1524 aa19.92■□□□□ 0.78
TRIM39-207ENST00000428404 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
TRIM39-207ENST00000428404 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
TRIM39-207ENST00000428404 P3H3Q8IVL6 736 aa19.89■□□□□ 0.77
TRIM39-207ENST00000428404 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
TRIM39-207ENST00000428404 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
TRIM39-207ENST00000428404 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
TRIM39-207ENST00000428404 KIAA0556O60303 1618 aa19.85■□□□□ 0.77
TRIM39-207ENST00000428404 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
TRIM39-207ENST00000428404 FMN1Q68DA7 1419 aa19.78■□□□□ 0.76
TRIM39-207ENST00000428404 ERCC6L2Q5T890 1561 aa19.78■□□□□ 0.76
TRIM39-207ENST00000428404 PTPRGP23470 1445 aa19.73■□□□□ 0.75
TRIM39-207ENST00000428404 CASKIN1Q8WXD9 1431 aa19.72■□□□□ 0.75
TRIM39-207ENST00000428404 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
TRIM39-207ENST00000428404 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
TRIM39-207ENST00000428404 PCF11O94913 1555 aaKnown RBP19.65■□□□□ 0.74
TRIM39-207ENST00000428404 PLB1Q6P1J6 1458 aa19.64■□□□□ 0.73
TRIM39-207ENST00000428404 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
TRIM39-207ENST00000428404 ABCA8O94911 1581 aa19.63■□□□□ 0.73
TRIM39-207ENST00000428404 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
TRIM39-207ENST00000428404 RAPGEF6Q8TEU7 1601 aa19.6■□□□□ 0.73
TRIM39-207ENST00000428404 NUP153P49790 1475 aaKnown RBP19.6■□□□□ 0.73
TRIM39-207ENST00000428404 MAP3K1Q13233 1512 aa19.59■□□□□ 0.73
TRIM39-207ENST00000428404 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.72
TRIM39-207ENST00000428404 UHRF1BP1LA0JNW5 1464 aa19.57■□□□□ 0.72
TRIM39-207ENST00000428404 HECW1Q76N89 1606 aa19.56■□□□□ 0.72
TRIM39-207ENST00000428404 APLP2Q06481 763 aa19.56■□□□□ 0.72
TRIM39-207ENST00000428404 EPRSP07814 1512 aaKnown RBP19.56■□□□□ 0.72
TRIM39-207ENST00000428404 RIMBP3CA6NJZ7 1639 aa19.55■□□□□ 0.72
TRIM39-207ENST00000428404 RIMBP3BA6NNM3 1639 aa19.55■□□□□ 0.72
TRIM39-207ENST00000428404 RIMBP3Q9UFD9 1639 aa19.55■□□□□ 0.72
TRIM39-207ENST00000428404 ABCC2Q92887 1545 aa19.54■□□□□ 0.72
TRIM39-207ENST00000428404 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
TRIM39-207ENST00000428404 TIAM1Q13009 1591 aa19.52■□□□□ 0.71
TRIM39-207ENST00000428404 KANK4Q5T7N3 995 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-207ENST00000428404 ATP10BO94823 1461 aa19.51■□□□□ 0.71
TRIM39-207ENST00000428404 LRRIQ1Q96JM4 1722 aa19.51■□□□□ 0.71
TRIM39-207ENST00000428404 CDK13Q14004 1512 aaKnown RBP19.48■□□□□ 0.71
TRIM39-207ENST00000428404 CFAP43Q8NDM7 1665 aa19.47■□□□□ 0.71
TRIM39-207ENST00000428404 ARID3CA6NKF2 412 aa19.47■□□□□ 0.71
TRIM39-207ENST00000428404 ADCY10Q96PN6 1610 aa19.47■□□□□ 0.71
TRIM39-207ENST00000428404 KDM5BQ9UGL1 1544 aa19.46■□□□□ 0.71
TRIM39-207ENST00000428404 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
TRIM39-207ENST00000428404 LRRC9Q6ZRR7 1453 aa19.46■□□□□ 0.71
TRIM39-207ENST00000428404 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
TRIM39-207ENST00000428404 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
TRIM39-207ENST00000428404 CDK11AQ9UQ88 783 aaPredicted RBP19.42■□□□□ 0.7
TRIM39-207ENST00000428404 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
TRIM39-207ENST00000428404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
TRIM39-207ENST00000428404 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
TRIM39-207ENST00000428404 MTUS2Q5JR59 1369 aa19.39■□□□□ 0.69
TRIM39-207ENST00000428404 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
TRIM39-207ENST00000428404 ZCCHC11Q5TAX3 1644 aaKnown RBP19.36■□□□□ 0.69
TRIM39-207ENST00000428404 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
TRIM39-207ENST00000428404 EHBP1L1Q8N3D4 1523 aa19.35■□□□□ 0.69
TRIM39-207ENST00000428404 NPM1P06748 294 aaKnown RBP eCLIP19.34■□□□□ 0.69
TRIM39-207ENST00000428404 NCOA2Q15596 1464 aa19.28■□□□□ 0.68
TRIM39-207ENST00000428404 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
TRIM39-207ENST00000428404 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
TRIM39-207ENST00000428404 WDR7Q9Y4E6 1490 aa19.26■□□□□ 0.67
TRIM39-207ENST00000428404 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
TRIM39-207ENST00000428404 ABCC10Q5T3U5 1492 aa19.24■□□□□ 0.67
TRIM39-207ENST00000428404 MAPKBP1O60336 1514 aa19.24■□□□□ 0.67
TRIM39-207ENST00000428404 KIF14Q15058 1648 aa19.22■□□□□ 0.67
TRIM39-207ENST00000428404 KCNH8Q96L42 1107 aa19.22■□□□□ 0.67
TRIM39-207ENST00000428404 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
TRIM39-207ENST00000428404 MYOM3Q5VTT5 1437 aa19.19■□□□□ 0.66
TRIM39-207ENST00000428404 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
TRIM39-207ENST00000428404 RRBP1Q9P2E9 1410 aaKnown RBP19.18■□□□□ 0.66
TRIM39-207ENST00000428404 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
TRIM39-207ENST00000428404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.17■□□□□ 0.66
TRIM39-207ENST00000428404 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
TRIM39-207ENST00000428404 MIA2Q96PC5 1412 aa19.15■□□□□ 0.66
TRIM39-207ENST00000428404 TTC37Q6PGP7 1564 aa19.12■□□□□ 0.65
TRIM39-207ENST00000428404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
TRIM39-207ENST00000428404 ABCA9Q8IUA7 1624 aa19.11■□□□□ 0.65
TRIM39-207ENST00000428404 PLCH2O75038 1416 aa19.1■□□□□ 0.65
TRIM39-207ENST00000428404 CFDP1Q9UEE9 299 aaPredicted RBP19.1■□□□□ 0.65
TRIM39-207ENST00000428404 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.65
TRIM39-207ENST00000428404 GLI2P10070 1586 aa19.08■□□□□ 0.65
TRIM39-207ENST00000428404 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.64
TRIM39-207ENST00000428404 ARAP3Q8WWN8 1544 aa19.06■□□□□ 0.64
TRIM39-207ENST00000428404 ITSN2Q9NZM3 1697 aa19.06■□□□□ 0.64
TRIM39-207ENST00000428404 PREX2Q70Z35 1606 aa19.05■□□□□ 0.64
TRIM39-207ENST00000428404 ZNF644Q9H582 1327 aaPredicted RBP19.04■□□□□ 0.64
TRIM39-207ENST00000428404 PTPN23Q9H3S7 1636 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms