RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
VARS2-203ENST00000428017 GOLGA3Q08378 1498 aa24.75■■□□□ 1.55
VARS2-203ENST00000428017 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
VARS2-203ENST00000428017 JPH4Q96JJ6 628 aa24.72■■□□□ 1.55
VARS2-203ENST00000428017 IQGAP2Q13576 1575 aa24.68■■□□□ 1.54
VARS2-203ENST00000428017 PRG4Q92954 1404 aaPredicted RBP24.63■■□□□ 1.53
VARS2-203ENST00000428017 CTTNBP2Q8WZ74 1663 aa24.62■■□□□ 1.53
VARS2-203ENST00000428017 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
VARS2-203ENST00000428017 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
VARS2-203ENST00000428017 CARMIL2Q6F5E8 1435 aa24.58■■□□□ 1.53
VARS2-203ENST00000428017 RANGAP1P46060 587 aaPredicted RBP24.56■■□□□ 1.52
VARS2-203ENST00000428017 UGGT2Q9NYU1 1516 aa24.55■■□□□ 1.52
VARS2-203ENST00000428017 RIMBP3CA6NJZ7 1639 aa24.54■■□□□ 1.52
VARS2-203ENST00000428017 RIMBP3BA6NNM3 1639 aa24.54■■□□□ 1.52
VARS2-203ENST00000428017 RIMBP3Q9UFD9 1639 aa24.54■■□□□ 1.52
VARS2-203ENST00000428017 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
VARS2-203ENST00000428017 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
VARS2-203ENST00000428017 LOC105371045A0A1W2PR82 267 aa24.49■■□□□ 1.51
VARS2-203ENST00000428017 DISP1Q96F81 1524 aa24.46■■□□□ 1.51
VARS2-203ENST00000428017 CYB5RLQ6IPT4 315 aa24.46■■□□□ 1.51
VARS2-203ENST00000428017 TTBK1Q5TCY1 1321 aaPredicted RBP24.45■■□□□ 1.5
VARS2-203ENST00000428017 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
VARS2-203ENST00000428017 KIAA0556O60303 1618 aa24.43■■□□□ 1.5
VARS2-203ENST00000428017 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
VARS2-203ENST00000428017 PTPRGP23470 1445 aa24.41■■□□□ 1.5
VARS2-203ENST00000428017 EFCAB5A4FU69 1503 aa24.38■■□□□ 1.49
VARS2-203ENST00000428017 SAMD9Q5K651 1589 aa24.36■■□□□ 1.49
VARS2-203ENST00000428017 CLIP1P30622 1438 aa24.33■■□□□ 1.49
VARS2-203ENST00000428017 FHOD3Q2V2M9 1422 aa24.31■■□□□ 1.48
VARS2-203ENST00000428017 ARHGAP35Q9NRY4 1499 aa24.29■■□□□ 1.48
VARS2-203ENST00000428017 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
VARS2-203ENST00000428017 UACAQ9BZF9 1416 aa24.23■■□□□ 1.47
VARS2-203ENST00000428017 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
VARS2-203ENST00000428017 FMN1Q68DA7 1419 aa24.19■■□□□ 1.46
VARS2-203ENST00000428017 PLB1Q6P1J6 1458 aa24.18■■□□□ 1.46
VARS2-203ENST00000428017 UHRF1BP1LA0JNW5 1464 aa24.15■■□□□ 1.46
VARS2-203ENST00000428017 ABCC2Q92887 1545 aa24.15■■□□□ 1.46
VARS2-203ENST00000428017 ABCA8O94911 1581 aa24.12■■□□□ 1.45
VARS2-203ENST00000428017 ADCY10Q96PN6 1610 aa24.12■■□□□ 1.45
VARS2-203ENST00000428017 ATP1B4Q9UN42 357 aaPredicted RBP24.11■■□□□ 1.45
VARS2-203ENST00000428017 RAPGEF6Q8TEU7 1601 aa24.08■■□□□ 1.45
VARS2-203ENST00000428017 ARID3CA6NKF2 412 aa24.06■■□□□ 1.44
VARS2-203ENST00000428017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
VARS2-203ENST00000428017 HNRNPUL2Q1KMD3 747 aaKnown RBP24.04■■□□□ 1.44
VARS2-203ENST00000428017 KDM5BQ9UGL1 1544 aa24.03■■□□□ 1.44
VARS2-203ENST00000428017 CASKIN1Q8WXD9 1431 aa24.01■■□□□ 1.43
VARS2-203ENST00000428017 NUP153P49790 1475 aaKnown RBP24.01■■□□□ 1.43
VARS2-203ENST00000428017 HECW1Q76N89 1606 aa23.99■■□□□ 1.43
VARS2-203ENST00000428017 VPS8Q8N3P4 1428 aa23.97■■□□□ 1.43
VARS2-203ENST00000428017 FYCO1Q9BQS8 1478 aa23.97■■□□□ 1.43
VARS2-203ENST00000428017 PCF11O94913 1555 aaKnown RBP23.96■■□□□ 1.43
VARS2-203ENST00000428017 ATP10BO94823 1461 aa23.96■■□□□ 1.43
VARS2-203ENST00000428017 ZCCHC11Q5TAX3 1644 aaKnown RBP23.95■■□□□ 1.42
VARS2-203ENST00000428017 MAPKBP1O60336 1514 aa23.94■■□□□ 1.42
VARS2-203ENST00000428017 ASXL2Q76L83 1435 aa23.93■■□□□ 1.42
VARS2-203ENST00000428017 EPRSP07814 1512 aaKnown RBP23.92■■□□□ 1.42
VARS2-203ENST00000428017 CCDC18Q5T9S5 1454 aa23.9■■□□□ 1.42
VARS2-203ENST00000428017 CDK11AQ9UQ88 783 aaPredicted RBP23.9■■□□□ 1.42
VARS2-203ENST00000428017 PLEKHD1A6NEE1 506 aa23.89■■□□□ 1.41
VARS2-203ENST00000428017 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
VARS2-203ENST00000428017 CDK13Q14004 1512 aaKnown RBP23.89■■□□□ 1.41
VARS2-203ENST00000428017 WDR7Q9Y4E6 1490 aa23.86■■□□□ 1.41
VARS2-203ENST00000428017 APLP2Q06481 763 aa23.84■■□□□ 1.41
VARS2-203ENST00000428017 KCNH8Q96L42 1107 aa23.83■■□□□ 1.41
VARS2-203ENST00000428017 FAM69CQ0P6D2 419 aa23.81■■□□□ 1.4
VARS2-203ENST00000428017 ABCC10Q5T3U5 1492 aa23.8■■□□□ 1.4
VARS2-203ENST00000428017 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
VARS2-203ENST00000428017 LRRIQ1Q96JM4 1722 aa23.73■■□□□ 1.39
VARS2-203ENST00000428017 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
VARS2-203ENST00000428017 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
VARS2-203ENST00000428017 GLI2P10070 1586 aa23.69■■□□□ 1.38
VARS2-203ENST00000428017 TIAM1Q13009 1591 aa23.69■■□□□ 1.38
VARS2-203ENST00000428017 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
VARS2-203ENST00000428017 CFAP43Q8NDM7 1665 aa23.66■■□□□ 1.38
VARS2-203ENST00000428017 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.38
VARS2-203ENST00000428017 KIF14Q15058 1648 aa23.64■■□□□ 1.38
VARS2-203ENST00000428017 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.37
VARS2-203ENST00000428017 CD109Q6YHK3 1445 aa23.62■■□□□ 1.37
VARS2-203ENST00000428017 LRRC9Q6ZRR7 1453 aa23.61■■□□□ 1.37
VARS2-203ENST00000428017 KIF13AQ9H1H9 1805 aa23.61■■□□□ 1.37
VARS2-203ENST00000428017 KANK4Q5T7N3 995 aaPredicted RBP23.6■■□□□ 1.37
VARS2-203ENST00000428017 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
VARS2-203ENST00000428017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.58■■□□□ 1.36
VARS2-203ENST00000428017 MAP3K4Q9Y6R4 1608 aa23.55■■□□□ 1.36
VARS2-203ENST00000428017 TEX14Q8IWB6 1497 aa23.54■■□□□ 1.36
VARS2-203ENST00000428017 TTC37Q6PGP7 1564 aa23.53■■□□□ 1.36
VARS2-203ENST00000428017 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
VARS2-203ENST00000428017 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
VARS2-203ENST00000428017 SUPT6HQ7KZ85 1726 aaKnown RBP23.49■■□□□ 1.35
VARS2-203ENST00000428017 PLCH2O75038 1416 aa23.49■■□□□ 1.35
VARS2-203ENST00000428017 TSPOAP1O95153 1857 aa23.47■■□□□ 1.35
VARS2-203ENST00000428017 EFCAB2Q5VUJ9 269 aa23.47■■□□□ 1.35
VARS2-203ENST00000428017 PPARGC1BQ86YN6 1023 aaKnown RBP23.45■■□□□ 1.34
VARS2-203ENST00000428017 ARHGAP5Q13017 1502 aa23.44■■□□□ 1.34
VARS2-203ENST00000428017 FANCAO15360 1455 aa23.44■■□□□ 1.34
VARS2-203ENST00000428017 CFDP1Q9UEE9 299 aaPredicted RBP23.44■■□□□ 1.34
VARS2-203ENST00000428017 GPATCH8Q9UKJ3 1502 aaKnown RBP23.43■■□□□ 1.34
VARS2-203ENST00000428017 MYO5CQ9NQX4 1742 aa23.43■■□□□ 1.34
VARS2-203ENST00000428017 ARAP3Q8WWN8 1544 aa23.43■■□□□ 1.34
VARS2-203ENST00000428017 PHLDB1Q86UU1 1377 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms