RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
RFX3-AS1-202ENST00000427722 PBRM1Q86U86 1689 aa16■□□□□ 0.15
RFX3-AS1-202ENST00000427722 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
RFX3-AS1-202ENST00000427722 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
RFX3-AS1-202ENST00000427722 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
RFX3-AS1-202ENST00000427722 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
RFX3-AS1-202ENST00000427722 ADAMTS12P58397 1594 aa15.96■□□□□ 0.14
RFX3-AS1-202ENST00000427722 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
RFX3-AS1-202ENST00000427722 GRIN2AQ12879 1464 aa15.92■□□□□ 0.14
RFX3-AS1-202ENST00000427722 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
RFX3-AS1-202ENST00000427722 FHAD1B1AJZ9 1412 aa15.92■□□□□ 0.14
RFX3-AS1-202ENST00000427722 KIF27Q86VH2 1401 aa15.87■□□□□ 0.13
RFX3-AS1-202ENST00000427722 ARAP1Q96P48 1450 aa15.87■□□□□ 0.13
RFX3-AS1-202ENST00000427722 NUP160Q12769 1436 aa15.86■□□□□ 0.13
RFX3-AS1-202ENST00000427722 CYB5RLQ6IPT4 315 aa15.86■□□□□ 0.13
RFX3-AS1-202ENST00000427722 CEP170Q5SW79 1584 aa15.83■□□□□ 0.13
RFX3-AS1-202ENST00000427722 IGF1RP08069 1367 aa15.8■□□□□ 0.12
RFX3-AS1-202ENST00000427722 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
RFX3-AS1-202ENST00000427722 ERCC6L2Q5T890 1561 aa15.73■□□□□ 0.11
RFX3-AS1-202ENST00000427722 CUL7Q14999 1698 aa15.73■□□□□ 0.11
RFX3-AS1-202ENST00000427722 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
RFX3-AS1-202ENST00000427722 CARMIL1Q5VZK9 1371 aa15.72■□□□□ 0.11
RFX3-AS1-202ENST00000427722 CACNB1Q02641 598 aaPredicted RBP15.7■□□□□ 0.1
RFX3-AS1-202ENST00000427722 SHROOM2Q13796 1616 aa15.69■□□□□ 0.1
RFX3-AS1-202ENST00000427722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.1
RFX3-AS1-202ENST00000427722 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
RFX3-AS1-202ENST00000427722 JPH4Q96JJ6 628 aa15.67■□□□□ 0.1
RFX3-AS1-202ENST00000427722 KIAA0586Q9BVV6 1533 aa15.65■□□□□ 0.1
RFX3-AS1-202ENST00000427722 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
RFX3-AS1-202ENST00000427722 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
RFX3-AS1-202ENST00000427722 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
RFX3-AS1-202ENST00000427722 IQGAP2Q13576 1575 aa15.54■□□□□ 0.08
RFX3-AS1-202ENST00000427722 PRXQ9BXM0 1461 aa15.52■□□□□ 0.08
RFX3-AS1-202ENST00000427722 CARMIL2Q6F5E8 1435 aa15.51■□□□□ 0.07
RFX3-AS1-202ENST00000427722 TTBK1Q5TCY1 1321 aaPredicted RBP15.5■□□□□ 0.07
RFX3-AS1-202ENST00000427722 PTPRGP23470 1445 aa15.48■□□□□ 0.07
RFX3-AS1-202ENST00000427722 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
RFX3-AS1-202ENST00000427722 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
RFX3-AS1-202ENST00000427722 UGGT2Q9NYU1 1516 aa15.46■□□□□ 0.07
RFX3-AS1-202ENST00000427722 EEA1Q15075 1411 aa15.45■□□□□ 0.06
RFX3-AS1-202ENST00000427722 DISP1Q96F81 1524 aa15.45■□□□□ 0.06
RFX3-AS1-202ENST00000427722 FAM9AQ8IZU1 332 aaPredicted RBP15.43■□□□□ 0.06
RFX3-AS1-202ENST00000427722 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
RFX3-AS1-202ENST00000427722 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
RFX3-AS1-202ENST00000427722 KIAA0556O60303 1618 aa15.4■□□□□ 0.06
RFX3-AS1-202ENST00000427722 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
RFX3-AS1-202ENST00000427722 CTTNBP2Q8WZ74 1663 aa15.38■□□□□ 0.05
RFX3-AS1-202ENST00000427722 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
RFX3-AS1-202ENST00000427722 MAPKBP1O60336 1514 aa15.37■□□□□ 0.05
RFX3-AS1-202ENST00000427722 UACAQ9BZF9 1416 aa15.36■□□□□ 0.05
RFX3-AS1-202ENST00000427722 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
RFX3-AS1-202ENST00000427722 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
RFX3-AS1-202ENST00000427722 UHRF1BP1LA0JNW5 1464 aa15.33■□□□□ 0.05
RFX3-AS1-202ENST00000427722 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
RFX3-AS1-202ENST00000427722 FAM69CQ0P6D2 419 aa15.32■□□□□ 0.04
RFX3-AS1-202ENST00000427722 PLB1Q6P1J6 1458 aa15.3■□□□□ 0.04
RFX3-AS1-202ENST00000427722 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
RFX3-AS1-202ENST00000427722 KIF21BO75037 1637 aa15.28■□□□□ 0.04
RFX3-AS1-202ENST00000427722 DIP2BQ9P265 1576 aa15.28■□□□□ 0.04
RFX3-AS1-202ENST00000427722 ASXL2Q76L83 1435 aa15.28■□□□□ 0.04
RFX3-AS1-202ENST00000427722 RANGAP1P46060 587 aaPredicted RBP15.28■□□□□ 0.04
RFX3-AS1-202ENST00000427722 P3H3Q8IVL6 736 aa15.28■□□□□ 0.04
RFX3-AS1-202ENST00000427722 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
RFX3-AS1-202ENST00000427722 KDM5BQ9UGL1 1544 aa15.27■□□□□ 0.03
RFX3-AS1-202ENST00000427722 ABCA8O94911 1581 aa15.24■□□□□ 0.03
RFX3-AS1-202ENST00000427722 KIF13AQ9H1H9 1805 aa15.23■□□□□ 0.03
RFX3-AS1-202ENST00000427722 SAMD9Q5K651 1589 aa15.23■□□□□ 0.03
RFX3-AS1-202ENST00000427722 FHOD3Q2V2M9 1422 aa15.21■□□□□ 0.03
RFX3-AS1-202ENST00000427722 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.02
RFX3-AS1-202ENST00000427722 ARID3CA6NKF2 412 aa15.2■□□□□ 0.02
RFX3-AS1-202ENST00000427722 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
RFX3-AS1-202ENST00000427722 WDR7Q9Y4E6 1490 aa15.18■□□□□ 0.02
RFX3-AS1-202ENST00000427722 EPRSP07814 1512 aaKnown RBP15.17■□□□□ 0.02
RFX3-AS1-202ENST00000427722 EFCAB5A4FU69 1503 aa15.16■□□□□ 0.02
RFX3-AS1-202ENST00000427722 GLI2P10070 1586 aa15.15■□□□□ 0.02
RFX3-AS1-202ENST00000427722 ATP10BO94823 1461 aa15.12■□□□□ 0.01
RFX3-AS1-202ENST00000427722 RAPGEF6Q8TEU7 1601 aa15.11■□□□□ 0.01
RFX3-AS1-202ENST00000427722 NUP153P49790 1475 aaKnown RBP15.11■□□□□ 0.01
RFX3-AS1-202ENST00000427722 KCNH8Q96L42 1107 aa15.1■□□□□ 0.01
RFX3-AS1-202ENST00000427722 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0.01
RFX3-AS1-202ENST00000427722 KDM6BO15054 1643 aa15.08■□□□□ 0
RFX3-AS1-202ENST00000427722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
RFX3-AS1-202ENST00000427722 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
RFX3-AS1-202ENST00000427722 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
RFX3-AS1-202ENST00000427722 TSPOAP1O95153 1857 aa15.07■□□□□ 0
RFX3-AS1-202ENST00000427722 MAP3K4Q9Y6R4 1608 aa15.06■□□□□ 0
RFX3-AS1-202ENST00000427722 TEX14Q8IWB6 1497 aa15.06■□□□□ 0
RFX3-AS1-202ENST00000427722 CD109Q6YHK3 1445 aa15.05■□□□□ -0
RFX3-AS1-202ENST00000427722 PPRC1Q5VV67 1664 aaKnown RBP15.05■□□□□ -0
RFX3-AS1-202ENST00000427722 CAPN15O75808 1086 aa15.04■□□□□ -0
RFX3-AS1-202ENST00000427722 FMN1Q68DA7 1419 aa15.03■□□□□ -0
RFX3-AS1-202ENST00000427722 ATP1B4Q9UN42 357 aaPredicted RBP15□□□□□ -0.01
RFX3-AS1-202ENST00000427722 MAGI3Q5TCQ9 1506 aa15□□□□□ -0.01
RFX3-AS1-202ENST00000427722 CDK13Q14004 1512 aaKnown RBP14.99□□□□□ -0.01
RFX3-AS1-202ENST00000427722 COL17A1Q9UMD9 1497 aaPredicted RBP14.99□□□□□ -0.01
RFX3-AS1-202ENST00000427722 APLP2Q06481 763 aa14.98□□□□□ -0.01
RFX3-AS1-202ENST00000427722 CFAP43Q8NDM7 1665 aa14.97□□□□□ -0.01
RFX3-AS1-202ENST00000427722 PLEKHD1A6NEE1 506 aa14.97□□□□□ -0.01
RFX3-AS1-202ENST00000427722 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
RFX3-AS1-202ENST00000427722 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms