RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
FIRRE-201ENST00000427391 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
FIRRE-201ENST00000427391 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
FIRRE-201ENST00000427391 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
FIRRE-201ENST00000427391 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
FIRRE-201ENST00000427391 MIER1Q8N108 512 aa17.15■□□□□ 0.34
FIRRE-201ENST00000427391 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
FIRRE-201ENST00000427391 PCF11O94913 1555 aaKnown RBP17.12■□□□□ 0.33
FIRRE-201ENST00000427391 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
FIRRE-201ENST00000427391 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
FIRRE-201ENST00000427391 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.32
FIRRE-201ENST00000427391 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
FIRRE-201ENST00000427391 FHAD1B1AJZ9 1412 aa17.07■□□□□ 0.32
FIRRE-201ENST00000427391 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
FIRRE-201ENST00000427391 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
FIRRE-201ENST00000427391 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
FIRRE-201ENST00000427391 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
FIRRE-201ENST00000427391 GTF3C3Q9Y5Q9 886 aa17.04■□□□□ 0.32
FIRRE-201ENST00000427391 MAP3K1Q13233 1512 aa17.04■□□□□ 0.32
FIRRE-201ENST00000427391 CUL7Q14999 1698 aa17.02■□□□□ 0.31
FIRRE-201ENST00000427391 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
FIRRE-201ENST00000427391 GAPVD1Q14C86 1478 aa17.01■□□□□ 0.31
FIRRE-201ENST00000427391 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
FIRRE-201ENST00000427391 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
FIRRE-201ENST00000427391 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
FIRRE-201ENST00000427391 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
FIRRE-201ENST00000427391 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
FIRRE-201ENST00000427391 FYCO1Q9BQS8 1478 aa16.97■□□□□ 0.31
FIRRE-201ENST00000427391 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
FIRRE-201ENST00000427391 EFCAB5A4FU69 1503 aa16.96■□□□□ 0.31
FIRRE-201ENST00000427391 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.3
FIRRE-201ENST00000427391 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
FIRRE-201ENST00000427391 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
FIRRE-201ENST00000427391 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.33e-6■■■□□ 17.4
FIRRE-201ENST00000427391 FMN1Q68DA7 1419 aa16.91■□□□□ 0.3
FIRRE-201ENST00000427391 MTUS2Q5JR59 1369 aa16.9■□□□□ 0.3
FIRRE-201ENST00000427391 ARID3CA6NKF2 412 aa16.9■□□□□ 0.3
FIRRE-201ENST00000427391 TARBP1Q13395 1621 aaKnown RBP16.89■□□□□ 0.29
FIRRE-201ENST00000427391 LRRIQ1Q96JM4 1722 aa16.87■□□□□ 0.29
FIRRE-201ENST00000427391 SAMD9Q5K651 1589 aa16.86■□□□□ 0.29
FIRRE-201ENST00000427391 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
FIRRE-201ENST00000427391 PTPRKQ15262 1439 aa16.83■□□□□ 0.29
FIRRE-201ENST00000427391 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
FIRRE-201ENST00000427391 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
FIRRE-201ENST00000427391 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
FIRRE-201ENST00000427391 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
FIRRE-201ENST00000427391 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
FIRRE-201ENST00000427391 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
FIRRE-201ENST00000427391 MAGI3Q5TCQ9 1506 aa16.78■□□□□ 0.28
FIRRE-201ENST00000427391 CHIC2Q9UKJ5 165 aa16.76■□□□□ 0.27
FIRRE-201ENST00000427391 MYOM3Q5VTT5 1437 aa16.75■□□□□ 0.27
FIRRE-201ENST00000427391 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
FIRRE-201ENST00000427391 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
FIRRE-201ENST00000427391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.74■□□□□ 0.27
FIRRE-201ENST00000427391 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
FIRRE-201ENST00000427391 ADAMTS12P58397 1594 aa16.73■□□□□ 0.27
FIRRE-201ENST00000427391 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
FIRRE-201ENST00000427391 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
FIRRE-201ENST00000427391 IQGAP2Q13576 1575 aa16.72■□□□□ 0.27
FIRRE-201ENST00000427391 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
FIRRE-201ENST00000427391 DDX10Q13206 875 aaKnown RBP16.7■□□□□ 0.26
FIRRE-201ENST00000427391 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
FIRRE-201ENST00000427391 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
FIRRE-201ENST00000427391 HFM1A2PYH4 1435 aa16.68■□□□□ 0.26
FIRRE-201ENST00000427391 NAIPQ13075 1403 aa16.68■□□□□ 0.26
FIRRE-201ENST00000427391 PPP1R15AO75807 674 aaPredicted RBP16.67■□□□□ 0.26
FIRRE-201ENST00000427391 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
FIRRE-201ENST00000427391 UGGT2Q9NYU1 1516 aa16.67■□□□□ 0.26
FIRRE-201ENST00000427391 EPRSP07814 1512 aaKnown RBP16.67■□□□□ 0.26
FIRRE-201ENST00000427391 WDR62O43379 1518 aa16.66■□□□□ 0.26
FIRRE-201ENST00000427391 FBLN2P98095 1184 aa16.64■□□□□ 0.25
FIRRE-201ENST00000427391 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
FIRRE-201ENST00000427391 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
FIRRE-201ENST00000427391 UACAQ9BZF9 1416 aa16.63■□□□□ 0.25
FIRRE-201ENST00000427391 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
FIRRE-201ENST00000427391 TONSLQ96HA7 1378 aa16.62■□□□□ 0.25
FIRRE-201ENST00000427391 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
FIRRE-201ENST00000427391 ZNF644Q9H582 1327 aaPredicted RBP16.59■□□□□ 0.25
FIRRE-201ENST00000427391 DISP1Q96F81 1524 aa16.59■□□□□ 0.25
FIRRE-201ENST00000427391 KDM6BO15054 1643 aa16.58■□□□□ 0.24
FIRRE-201ENST00000427391 EIF4G3O43432 1585 aaKnown RBP16.58■□□□□ 0.24
FIRRE-201ENST00000427391 FOXD1Q16676 465 aa16.58■□□□□ 0.24
FIRRE-201ENST00000427391 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.24
FIRRE-201ENST00000427391 KIAA0586Q9BVV6 1533 aa16.56■□□□□ 0.24
FIRRE-201ENST00000427391 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
FIRRE-201ENST00000427391 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
FIRRE-201ENST00000427391 TCOF1Q13428 1488 aaKnown RBP16.55■□□□□ 0.24
FIRRE-201ENST00000427391 KIAA0556O60303 1618 aa16.54■□□□□ 0.24
FIRRE-201ENST00000427391 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
FIRRE-201ENST00000427391 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
FIRRE-201ENST00000427391 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
FIRRE-201ENST00000427391 PLB1Q6P1J6 1458 aa16.49■□□□□ 0.23
FIRRE-201ENST00000427391 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
FIRRE-201ENST00000427391 MIA2Q96PC5 1412 aa16.48■□□□□ 0.23
FIRRE-201ENST00000427391 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
FIRRE-201ENST00000427391 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
FIRRE-201ENST00000427391 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
FIRRE-201ENST00000427391 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
FIRRE-201ENST00000427391 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.23
FIRRE-201ENST00000427391 ABCC5O15440 1437 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms