RNA–Protein interactions for RNA: ENST00000426801.1

PKP4P1-201, Transcript of plakophilin 4 pseudogene 1, humanhuman

BASIC

Gene PKP4P1, Length 2,158 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4P1-201ENST00000426801 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
PKP4P1-201ENST00000426801 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
PKP4P1-201ENST00000426801 TIAM1Q13009 1591 aa17.75■□□□□ 0.43
PKP4P1-201ENST00000426801 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
PKP4P1-201ENST00000426801 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
PKP4P1-201ENST00000426801 ANP32CO43423 234 aa17.71■□□□□ 0.43
PKP4P1-201ENST00000426801 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
PKP4P1-201ENST00000426801 TIMELESSQ9UNS1 1208 aa17.69■□□□□ 0.42
PKP4P1-201ENST00000426801 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
PKP4P1-201ENST00000426801 CUX1P39880 1505 aa17.67■□□□□ 0.42
PKP4P1-201ENST00000426801 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
PKP4P1-201ENST00000426801 LRRC9Q6ZRR7 1453 aa17.64■□□□□ 0.42
PKP4P1-201ENST00000426801 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
PKP4P1-201ENST00000426801 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
PKP4P1-201ENST00000426801 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
PKP4P1-201ENST00000426801 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
PKP4P1-201ENST00000426801 MYT1LQ9UL68 1186 aa17.56■□□□□ 0.4
PKP4P1-201ENST00000426801 IRX6P78412 446 aaPredicted RBP17.55■□□□□ 0.4
PKP4P1-201ENST00000426801 FAM50AQ14320 339 aaKnown RBP17.53■□□□□ 0.4
PKP4P1-201ENST00000426801 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
PKP4P1-201ENST00000426801 PCF11O94913 1555 aaKnown RBP17.51■□□□□ 0.39
PKP4P1-201ENST00000426801 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
PKP4P1-201ENST00000426801 TONSLQ96HA7 1378 aa17.49■□□□□ 0.39
PKP4P1-201ENST00000426801 DEKP35659 375 aaKnown RBP17.48■□□□□ 0.39
PKP4P1-201ENST00000426801 PPP4R2Q9NY27 417 aa17.47■□□□□ 0.39
PKP4P1-201ENST00000426801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.47■□□□□ 0.39
PKP4P1-201ENST00000426801 KDM5BQ9UGL1 1544 aa17.46■□□□□ 0.39
PKP4P1-201ENST00000426801 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
PKP4P1-201ENST00000426801 IGF1RP08069 1367 aa17.43■□□□□ 0.38
PKP4P1-201ENST00000426801 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
PKP4P1-201ENST00000426801 PRKCSHP14314 528 aaPredicted RBP17.4■□□□□ 0.38
PKP4P1-201ENST00000426801 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
PKP4P1-201ENST00000426801 UACAQ9BZF9 1416 aa17.39■□□□□ 0.37
PKP4P1-201ENST00000426801 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.37
PKP4P1-201ENST00000426801 CFTRP13569 1480 aa17.38■□□□□ 0.37
PKP4P1-201ENST00000426801 NCOA2Q15596 1464 aa17.38■□□□□ 0.37
PKP4P1-201ENST00000426801 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
PKP4P1-201ENST00000426801 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
PKP4P1-201ENST00000426801 NOP58Q9Y2X3 529 aaKnown RBP17.36■□□□□ 0.37
PKP4P1-201ENST00000426801 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
PKP4P1-201ENST00000426801 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
PKP4P1-201ENST00000426801 WASHC2AQ641Q2 1341 aa17.35■□□□□ 0.37
PKP4P1-201ENST00000426801 FGD6Q6ZV73 1430 aa17.35■□□□□ 0.37
PKP4P1-201ENST00000426801 B4GALNT3Q6L9W6 998 aa17.34■□□□□ 0.37
PKP4P1-201ENST00000426801 CNTLNQ9NXG0 1405 aa17.33■□□□□ 0.36
PKP4P1-201ENST00000426801 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
PKP4P1-201ENST00000426801 CCDC184Q52MB2 194 aa17.32■□□□□ 0.36
PKP4P1-201ENST00000426801 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
PKP4P1-201ENST00000426801 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
PKP4P1-201ENST00000426801 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
PKP4P1-201ENST00000426801 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.36
PKP4P1-201ENST00000426801 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
PKP4P1-201ENST00000426801 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
PKP4P1-201ENST00000426801 HSPA5P11021 654 aaKnown RBP17.29■□□□□ 0.36
PKP4P1-201ENST00000426801 ZBED9Q6R2W3 1325 aa17.29■□□□□ 0.36
PKP4P1-201ENST00000426801 NAIPQ13075 1403 aa17.28■□□□□ 0.36
PKP4P1-201ENST00000426801 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
PKP4P1-201ENST00000426801 NBR1Q14596 966 aa17.27■□□□□ 0.36
PKP4P1-201ENST00000426801 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
PKP4P1-201ENST00000426801 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
PKP4P1-201ENST00000426801 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
PKP4P1-201ENST00000426801 HECW1Q76N89 1606 aa17.22■□□□□ 0.35
PKP4P1-201ENST00000426801 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
PKP4P1-201ENST00000426801 FMN1Q68DA7 1419 aa17.21■□□□□ 0.35
PKP4P1-201ENST00000426801 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
PKP4P1-201ENST00000426801 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.34
PKP4P1-201ENST00000426801 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
PKP4P1-201ENST00000426801 CCDC7Q96M83 1385 aa17.19■□□□□ 0.34
PKP4P1-201ENST00000426801 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
PKP4P1-201ENST00000426801 LRRIQ1Q96JM4 1722 aa17.18■□□□□ 0.34
PKP4P1-201ENST00000426801 MRS2Q9HD23 443 aa17.18■□□□□ 0.34
PKP4P1-201ENST00000426801 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
PKP4P1-201ENST00000426801 CTTNBP2Q8WZ74 1663 aa17.18■□□□□ 0.34
PKP4P1-201ENST00000426801 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
PKP4P1-201ENST00000426801 SMG6Q86US8 1419 aaKnown RBP17.17■□□□□ 0.34
PKP4P1-201ENST00000426801 C11orf95C9JLR9 678 aaPredicted RBP17.16■□□□□ 0.34
PKP4P1-201ENST00000426801 IPO9Q96P70 1041 aaKnown RBP17.16■□□□□ 0.34
PKP4P1-201ENST00000426801 POLR1AO95602 1720 aaPredicted RBP17.16■□□□□ 0.34
PKP4P1-201ENST00000426801 MYOM3Q5VTT5 1437 aa17.16■□□□□ 0.34
PKP4P1-201ENST00000426801 AKNAQ7Z591 1439 aa17.15■□□□□ 0.34
PKP4P1-201ENST00000426801 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
PKP4P1-201ENST00000426801 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
PKP4P1-201ENST00000426801 MTUS2Q5JR59 1369 aa17.14■□□□□ 0.33
PKP4P1-201ENST00000426801 RNF123Q5XPI4 1314 aa17.13■□□□□ 0.33
PKP4P1-201ENST00000426801 SUPT6HQ7KZ85 1726 aaKnown RBP17.12■□□□□ 0.33
PKP4P1-201ENST00000426801 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
PKP4P1-201ENST00000426801 KDM6BO15054 1643 aa17.1■□□□□ 0.33
PKP4P1-201ENST00000426801 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
PKP4P1-201ENST00000426801 EHBP1L1Q8N3D4 1523 aa17.09■□□□□ 0.33
PKP4P1-201ENST00000426801 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.33
PKP4P1-201ENST00000426801 UGGT2Q9NYU1 1516 aa17.08■□□□□ 0.32
PKP4P1-201ENST00000426801 CUL7Q14999 1698 aa17.08■□□□□ 0.32
PKP4P1-201ENST00000426801 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
PKP4P1-201ENST00000426801 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
PKP4P1-201ENST00000426801 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
PKP4P1-201ENST00000426801 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
PKP4P1-201ENST00000426801 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
PKP4P1-201ENST00000426801 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
PKP4P1-201ENST00000426801 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
PKP4P1-201ENST00000426801 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms