RNA–Protein interactions for RNA: ENST00000425388.1

LINC00501-201, long intergenic non-protein coding RNA 501, humanhuman

TSL 2 BASIC

Gene LINC00501, Length 2,046 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00501-201ENST00000425388 PEG3Q9GZU2 1588 aa11.58□□□□□ -0.56
LINC00501-201ENST00000425388 NEFLP07196 543 aa11.56□□□□□ -0.56
LINC00501-201ENST00000425388 WIZO95785 1651 aa11.55□□□□□ -0.56
LINC00501-201ENST00000425388 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.56
LINC00501-201ENST00000425388 PKNOX2Q96KN3 472 aa11.48□□□□□ -0.57
LINC00501-201ENST00000425388 SMARCA2P51531 1590 aa11.48□□□□□ -0.57
LINC00501-201ENST00000425388 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.57
LINC00501-201ENST00000425388 CCDC136Q96JN2 1154 aa11.45□□□□□ -0.58
LINC00501-201ENST00000425388 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
LINC00501-201ENST00000425388 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
LINC00501-201ENST00000425388 NBR1Q14596 966 aa11.42□□□□□ -0.58
LINC00501-201ENST00000425388 EIF4G1Q04637 1599 aaKnown RBP11.42□□□□□ -0.58
LINC00501-201ENST00000425388 PPP4R3CPQ6ZMV5 832 aa11.4□□□□□ -0.59
LINC00501-201ENST00000425388 NCAPD3P42695 1498 aa11.39□□□□□ -0.59
LINC00501-201ENST00000425388 RTL5Q5HYW3 569 aaPredicted RBP11.38□□□□□ -0.59
LINC00501-201ENST00000425388 HMGXB3Q12766 1538 aa11.38□□□□□ -0.59
LINC00501-201ENST00000425388 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
LINC00501-201ENST00000425388 BAZ1BQ9UIG0 1483 aaKnown RBP11.36□□□□□ -0.59
LINC00501-201ENST00000425388 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
LINC00501-201ENST00000425388 CDK11BP21127 795 aaKnown RBP11.36□□□□□ -0.59
LINC00501-201ENST00000425388 GLIPR1L2Q4G1C9 344 aa11.35□□□□□ -0.59
LINC00501-201ENST00000425388 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
LINC00501-201ENST00000425388 C11orf95C9JLR9 678 aaPredicted RBP11.33□□□□□ -0.6
LINC00501-201ENST00000425388 HMGB1P09429 215 aaKnown RBP11.33□□□□□ -0.6
LINC00501-201ENST00000425388 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
LINC00501-201ENST00000425388 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
LINC00501-201ENST00000425388 ITGAEP38570 1179 aa11.32□□□□□ -0.6
LINC00501-201ENST00000425388 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
LINC00501-201ENST00000425388 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
LINC00501-201ENST00000425388 PAXIP1Q6ZW49 1069 aaPredicted RBP11.3□□□□□ -0.6
LINC00501-201ENST00000425388 CHMP4AQ9BY43 222 aa11.3□□□□□ -0.6
LINC00501-201ENST00000425388 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
LINC00501-201ENST00000425388 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
LINC00501-201ENST00000425388 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
LINC00501-201ENST00000425388 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
LINC00501-201ENST00000425388 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
LINC00501-201ENST00000425388 CCER2I3L3R5 266 aa11.25□□□□□ -0.61
LINC00501-201ENST00000425388 WASHC2AQ641Q2 1341 aa11.25□□□□□ -0.61
LINC00501-201ENST00000425388 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
LINC00501-201ENST00000425388 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
LINC00501-201ENST00000425388 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
LINC00501-201ENST00000425388 WASHC2CQ9Y4E1 1318 aa11.23□□□□□ -0.61
LINC00501-201ENST00000425388 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
LINC00501-201ENST00000425388 CC2D2AQ9P2K1 1620 aa11.21□□□□□ -0.62
LINC00501-201ENST00000425388 IGSF3O75054 1194 aa11.2□□□□□ -0.62
LINC00501-201ENST00000425388 PPP4R2Q9NY27 417 aa11.2□□□□□ -0.62
LINC00501-201ENST00000425388 ANP32AP39687 249 aaKnown RBP11.19□□□□□ -0.62
LINC00501-201ENST00000425388 KCNH8Q96L42 1107 aa11.19□□□□□ -0.62
LINC00501-201ENST00000425388 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
LINC00501-201ENST00000425388 DHX57Q6P158 1386 aaKnown RBP11.19□□□□□ -0.62
LINC00501-201ENST00000425388 EEA1Q15075 1411 aa11.18□□□□□ -0.62
LINC00501-201ENST00000425388 HNRNPUL2Q1KMD3 747 aaKnown RBP11.18□□□□□ -0.62
LINC00501-201ENST00000425388 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
LINC00501-201ENST00000425388 ZBTB47Q9UFB7 747 aaPredicted RBP11.16□□□□□ -0.62
LINC00501-201ENST00000425388 BRD2P25440 801 aaKnown RBP11.15□□□□□ -0.62
LINC00501-201ENST00000425388 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
LINC00501-201ENST00000425388 CFTRP13569 1480 aa11.12□□□□□ -0.63
LINC00501-201ENST00000425388 ZMYND15Q9H091 742 aa11.12□□□□□ -0.63
LINC00501-201ENST00000425388 PUS7Q96PZ0 661 aaKnown RBP11.1□□□□□ -0.63
LINC00501-201ENST00000425388 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
LINC00501-201ENST00000425388 PPM1GO15355 546 aaPredicted RBP11.09□□□□□ -0.63
LINC00501-201ENST00000425388 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
LINC00501-201ENST00000425388 TRIM52Q96A61 297 aa11.09□□□□□ -0.63
LINC00501-201ENST00000425388 ANP32CO43423 234 aa11.08□□□□□ -0.64
LINC00501-201ENST00000425388 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
LINC00501-201ENST00000425388 PKD2Q13563 968 aa11.07□□□□□ -0.64
LINC00501-201ENST00000425388 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
LINC00501-201ENST00000425388 CADPSQ9ULU8 1353 aa11.06□□□□□ -0.64
LINC00501-201ENST00000425388 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00501-201ENST00000425388 NEFMP07197 916 aa11.06□□□□□ -0.64
LINC00501-201ENST00000425388 CUX2O14529 1486 aa11.05□□□□□ -0.64
LINC00501-201ENST00000425388 PPP1R15AO75807 674 aaPredicted RBP11.04□□□□□ -0.64
LINC00501-201ENST00000425388 GOLGA3Q08378 1498 aa11.04□□□□□ -0.64
LINC00501-201ENST00000425388 FOXD1Q16676 465 aa11.04□□□□□ -0.64
LINC00501-201ENST00000425388 GSE1Q14687 1217 aa11.02□□□□□ -0.64
LINC00501-201ENST00000425388 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.64
LINC00501-201ENST00000425388 PDE4CQ08493 712 aa11.02□□□□□ -0.65
LINC00501-201ENST00000425388 RRP9O43818 475 aaKnown RBP11.01□□□□□ -0.65
LINC00501-201ENST00000425388 DDX10Q13206 875 aaKnown RBP11.01□□□□□ -0.65
LINC00501-201ENST00000425388 BRPF3Q9ULD4 1205 aa11.01□□□□□ -0.65
LINC00501-201ENST00000425388 VPS8Q8N3P4 1428 aa11.01□□□□□ -0.65
LINC00501-201ENST00000425388 TOP2BQ02880 1626 aa11.01□□□□□ -0.65
LINC00501-201ENST00000425388 DHX37Q8IY37 1157 aaKnown RBP11.01□□□□□ -0.65
LINC00501-201ENST00000425388 TAF7LQ5H9L4 462 aa11□□□□□ -0.65
LINC00501-201ENST00000425388 BIVM-ERCC5R4GMW8 1640 aa11□□□□□ -0.65
LINC00501-201ENST00000425388 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
LINC00501-201ENST00000425388 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
LINC00501-201ENST00000425388 CEP164Q9UPV0 1460 aa10.98□□□□□ -0.65
LINC00501-201ENST00000425388 ARID3AQ99856 593 aa10.97□□□□□ -0.65
LINC00501-201ENST00000425388 BRPF1P55201 1214 aaPredicted RBP10.97□□□□□ -0.65
LINC00501-201ENST00000425388 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
LINC00501-201ENST00000425388 IRX6P78412 446 aaPredicted RBP10.96□□□□□ -0.65
LINC00501-201ENST00000425388 HNRNPUQ00839 825 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC00501-201ENST00000425388 B4GALNT3Q6L9W6 998 aa10.95□□□□□ -0.66
LINC00501-201ENST00000425388 HSP90AA2PQ14568 343 aaPredicted RBP10.94□□□□□ -0.66
LINC00501-201ENST00000425388 CLIP1P30622 1438 aa10.94□□□□□ -0.66
LINC00501-201ENST00000425388 CUX1P39880 1505 aa10.92□□□□□ -0.66
LINC00501-201ENST00000425388 KIF21BO75037 1637 aa10.91□□□□□ -0.66
LINC00501-201ENST00000425388 FGD1P98174 961 aa10.91□□□□□ -0.66
LINC00501-201ENST00000425388 FANCD2Q9BXW9 1451 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms