RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 LAMC3Q9Y6N6 1575 aa9.98□□□□□ -0.81
VPS8-205ENST00000424721 CADPSQ9ULU8 1353 aa9.97□□□□□ -0.81
VPS8-205ENST00000424721 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
VPS8-205ENST00000424721 MROH2BQ7Z745 1585 aa9.95□□□□□ -0.82
VPS8-205ENST00000424721 VASPP50552 380 aaPredicted RBP9.94□□□□□ -0.82
VPS8-205ENST00000424721 MIER1Q8N108 512 aa9.9□□□□□ -0.82
VPS8-205ENST00000424721 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
VPS8-205ENST00000424721 FXR2P51116 673 aaKnown RBP eCLIP9.88□□□□□ -0.83
VPS8-205ENST00000424721 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
VPS8-205ENST00000424721 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
VPS8-205ENST00000424721 CHADLQ6NUI6 762 aa9.86□□□□□ -0.83
VPS8-205ENST00000424721 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
VPS8-205ENST00000424721 THOC2Q8NI27 1593 aaKnown RBP9.84□□□□□ -0.83
VPS8-205ENST00000424721 PLEKHG5O94827 1062 aa9.84□□□□□ -0.83
VPS8-205ENST00000424721 PRKAR2AP13861 404 aaKnown RBP9.84□□□□□ -0.83
VPS8-205ENST00000424721 POTEHQ6S545 545 aa9.84□□□□□ -0.83
VPS8-205ENST00000424721 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
VPS8-205ENST00000424721 TRIM41Q8WV44 630 aa9.82□□□□□ -0.84
VPS8-205ENST00000424721 CEP164Q9UPV0 1460 aa9.82□□□□□ -0.84
VPS8-205ENST00000424721 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
VPS8-205ENST00000424721 RSF1Q96T23 1441 aaPredicted RBP9.8□□□□□ -0.84
VPS8-205ENST00000424721 WIZO95785 1651 aa9.8□□□□□ -0.84
VPS8-205ENST00000424721 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
VPS8-205ENST00000424721 FANCD2Q9BXW9 1451 aa9.79□□□□□ -0.84
VPS8-205ENST00000424721 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
VPS8-205ENST00000424721 CFTRP13569 1480 aa9.79□□□□□ -0.84
VPS8-205ENST00000424721 WDR62O43379 1518 aa9.77□□□□□ -0.84
VPS8-205ENST00000424721 MNX1P50219 401 aaPredicted RBP9.75□□□□□ -0.85
VPS8-205ENST00000424721 ZBTB47Q9UFB7 747 aaPredicted RBP9.75□□□□□ -0.85
VPS8-205ENST00000424721 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
VPS8-205ENST00000424721 TOP2AP11388 1531 aaKnown RBP9.72□□□□□ -0.85
VPS8-205ENST00000424721 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS8-205ENST00000424721 ABCC8Q09428 1581 aa9.68□□□□□ -0.86
VPS8-205ENST00000424721 SPOCK2Q92563 424 aa9.68□□□□□ -0.86
VPS8-205ENST00000424721 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
VPS8-205ENST00000424721 URB2Q14146 1524 aaKnown RBP9.65□□□□□ -0.86
VPS8-205ENST00000424721 IFT140Q96RY7 1462 aa9.65□□□□□ -0.87
VPS8-205ENST00000424721 NUBP1P53384 320 aa9.64□□□□□ -0.87
VPS8-205ENST00000424721 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
VPS8-205ENST00000424721 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
VPS8-205ENST00000424721 CYB5RLQ6IPT4 315 aa9.57□□□□□ -0.88
VPS8-205ENST00000424721 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
VPS8-205ENST00000424721 HAX1O00165 279 aa9.56□□□□□ -0.88
VPS8-205ENST00000424721 CD44P16070 742 aaKnown RBP9.56□□□□□ -0.88
VPS8-205ENST00000424721 DCAF8Q5TAQ9 597 aa9.56□□□□□ -0.88
VPS8-205ENST00000424721 FAM212AQ96EL1 285 aa9.56□□□□□ -0.88
VPS8-205ENST00000424721 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
VPS8-205ENST00000424721 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
VPS8-205ENST00000424721 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
VPS8-205ENST00000424721 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
VPS8-205ENST00000424721 ZNF608Q9ULD9 1512 aaPredicted RBP9.54□□□□□ -0.88
VPS8-205ENST00000424721 PRDM2Q13029 1718 aa9.53□□□□□ -0.88
VPS8-205ENST00000424721 PAK3O75914 559 aaPredicted RBP9.53□□□□□ -0.88
VPS8-205ENST00000424721 SOGA1O94964 1423 aa9.53□□□□□ -0.88
VPS8-205ENST00000424721 GSE1Q14687 1217 aa9.52□□□□□ -0.89
VPS8-205ENST00000424721 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.89
VPS8-205ENST00000424721 AQRO60306 1485 aaKnown RBP eCLIP9.52□□□□□ -0.89
VPS8-205ENST00000424721 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
VPS8-205ENST00000424721 EVX2Q03828 476 aa9.49□□□□□ -0.89
VPS8-205ENST00000424721 PKD2Q13563 968 aa9.49□□□□□ -0.89
VPS8-205ENST00000424721 TDRD9Q8NDG6 1382 aaKnown RBP9.49□□□□□ -0.89
VPS8-205ENST00000424721 ARHGEF11O15085 1522 aa9.47□□□□□ -0.89
VPS8-205ENST00000424721 RIMBP3CA6NJZ7 1639 aa9.47□□□□□ -0.89
VPS8-205ENST00000424721 RIMBP3BA6NNM3 1639 aa9.47□□□□□ -0.89
VPS8-205ENST00000424721 RIMBP3Q9UFD9 1639 aa9.47□□□□□ -0.89
VPS8-205ENST00000424721 ECM2O94769 699 aaPredicted RBP9.47□□□□□ -0.89
VPS8-205ENST00000424721 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
VPS8-205ENST00000424721 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
VPS8-205ENST00000424721 SUPT5HO00267 1087 aaKnown RBP9.45□□□□□ -0.9
VPS8-205ENST00000424721 PYGBP11216 843 aa9.45□□□□□ -0.9
VPS8-205ENST00000424721 RAD54L2Q9Y4B4 1467 aa9.44□□□□□ -0.9
VPS8-205ENST00000424721 EIF4G3O43432 1585 aaKnown RBP9.44□□□□□ -0.9
VPS8-205ENST00000424721 TARBP1Q13395 1621 aaKnown RBP9.43□□□□□ -0.9
VPS8-205ENST00000424721 PHF12Q96QT6 1004 aa9.43□□□□□ -0.9
VPS8-205ENST00000424721 WDR97A6NE52 1622 aa9.42□□□□□ -0.9
VPS8-205ENST00000424721 GRIN2BQ13224 1484 aa9.41□□□□□ -0.9
VPS8-205ENST00000424721 ZNF579Q8NAF0 562 aaKnown RBP9.41□□□□□ -0.9
VPS8-205ENST00000424721 MAGI1Q96QZ7 1491 aaPredicted RBP9.4□□□□□ -0.9
VPS8-205ENST00000424721 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.91
VPS8-205ENST00000424721 KIF12Q96FN5 646 aa9.38□□□□□ -0.91
VPS8-205ENST00000424721 SNAPC4Q5SXM2 1469 aa9.38□□□□□ -0.91
VPS8-205ENST00000424721 SYNJ1O43426 1573 aa9.37□□□□□ -0.91
VPS8-205ENST00000424721 SYNJ2O15056 1496 aa9.37□□□□□ -0.91
VPS8-205ENST00000424721 GAPVD1Q14C86 1478 aa9.37□□□□□ -0.91
VPS8-205ENST00000424721 MAP3K13O43283 966 aa9.37□□□□□ -0.91
VPS8-205ENST00000424721 CHRM1P11229 460 aaPredicted RBP9.37□□□□□ -0.91
VPS8-205ENST00000424721 WRNQ14191 1432 aaPredicted RBP eCLIP9.36□□□□□ -0.91
VPS8-205ENST00000424721 CHD1O14646 1710 aa9.36□□□□□ -0.91
VPS8-205ENST00000424721 ARAP1Q96P48 1450 aa9.35□□□□□ -0.91
VPS8-205ENST00000424721 CUX1P39880 1505 aa9.35□□□□□ -0.91
VPS8-205ENST00000424721 RGL2O15211 777 aa9.34□□□□□ -0.91
VPS8-205ENST00000424721 PCDHB13Q9Y5F0 798 aa9.34□□□□□ -0.91
VPS8-205ENST00000424721 RNF25Q96BH1 459 aaPredicted RBP9.33□□□□□ -0.92
VPS8-205ENST00000424721 ABCA10Q8WWZ4 1543 aa9.31□□□□□ -0.92
VPS8-205ENST00000424721 SP7Q8TDD2 431 aaPredicted RBP9.31□□□□□ -0.92
VPS8-205ENST00000424721 MS4A3Q96HJ5 214 aa9.31□□□□□ -0.92
VPS8-205ENST00000424721 PCDHB8Q9UN66 801 aa9.31□□□□□ -0.92
VPS8-205ENST00000424721 IFNL1Q8IU54 200 aa9.3□□□□□ -0.92
VPS8-205ENST00000424721 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
VPS8-205ENST00000424721 TAOK2Q9UL54 1235 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms