RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
LINC01399-201ENST00000423311 CLIP1P30622 1438 aa14.54□□□□□ -0.08
LINC01399-201ENST00000423311 IQGAP2Q13576 1575 aa14.53□□□□□ -0.08
LINC01399-201ENST00000423311 KIAA0586Q9BVV6 1533 aa14.52□□□□□ -0.08
LINC01399-201ENST00000423311 NUP160Q12769 1436 aa14.52□□□□□ -0.08
LINC01399-201ENST00000423311 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
LINC01399-201ENST00000423311 EFCAB5A4FU69 1503 aa14.5□□□□□ -0.09
LINC01399-201ENST00000423311 FBLN2P98095 1184 aa14.49□□□□□ -0.09
LINC01399-201ENST00000423311 SAMD9Q5K651 1589 aa14.47□□□□□ -0.09
LINC01399-201ENST00000423311 ARHGAP35Q9NRY4 1499 aa14.46□□□□□ -0.09
LINC01399-201ENST00000423311 UGGT2Q9NYU1 1516 aa14.46□□□□□ -0.1
LINC01399-201ENST00000423311 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
LINC01399-201ENST00000423311 SHROOM2Q13796 1616 aa14.4□□□□□ -0.1
LINC01399-201ENST00000423311 CLASP1Q7Z460 1538 aa14.4□□□□□ -0.1
LINC01399-201ENST00000423311 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
LINC01399-201ENST00000423311 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
LINC01399-201ENST00000423311 KIAA0556O60303 1618 aa14.37□□□□□ -0.11
LINC01399-201ENST00000423311 JPH4Q96JJ6 628 aa14.36□□□□□ -0.11
LINC01399-201ENST00000423311 DISP1Q96F81 1524 aa14.36□□□□□ -0.11
LINC01399-201ENST00000423311 CARMIL2Q6F5E8 1435 aa14.35□□□□□ -0.11
LINC01399-201ENST00000423311 FMN1Q68DA7 1419 aa14.34□□□□□ -0.11
LINC01399-201ENST00000423311 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
LINC01399-201ENST00000423311 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
LINC01399-201ENST00000423311 P3H3Q8IVL6 736 aa14.29□□□□□ -0.12
LINC01399-201ENST00000423311 PRG4Q92954 1404 aaPredicted RBP14.29□□□□□ -0.12
LINC01399-201ENST00000423311 FYCO1Q9BQS8 1478 aa14.29□□□□□ -0.12
LINC01399-201ENST00000423311 PCF11O94913 1555 aaKnown RBP14.27□□□□□ -0.12
LINC01399-201ENST00000423311 CASKIN1Q8WXD9 1431 aa14.27□□□□□ -0.12
LINC01399-201ENST00000423311 MAP3K1Q13233 1512 aa14.25□□□□□ -0.13
LINC01399-201ENST00000423311 HECW1Q76N89 1606 aa14.23□□□□□ -0.13
LINC01399-201ENST00000423311 APLP2Q06481 763 aa14.22□□□□□ -0.13
LINC01399-201ENST00000423311 CFAP43Q8NDM7 1665 aa14.22□□□□□ -0.13
LINC01399-201ENST00000423311 RAPGEF6Q8TEU7 1601 aa14.22□□□□□ -0.13
LINC01399-201ENST00000423311 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
LINC01399-201ENST00000423311 LRRIQ1Q96JM4 1722 aa14.2□□□□□ -0.14
LINC01399-201ENST00000423311 ERCC6L2Q5T890 1561 aa14.19□□□□□ -0.14
LINC01399-201ENST00000423311 CCDC18Q5T9S5 1454 aa14.18□□□□□ -0.14
LINC01399-201ENST00000423311 PTPRGP23470 1445 aa14.18□□□□□ -0.14
LINC01399-201ENST00000423311 ABCA8O94911 1581 aa14.17□□□□□ -0.14
LINC01399-201ENST00000423311 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
LINC01399-201ENST00000423311 EPRSP07814 1512 aaKnown RBP14.14□□□□□ -0.15
LINC01399-201ENST00000423311 NUP153P49790 1475 aaKnown RBP14.13□□□□□ -0.15
LINC01399-201ENST00000423311 UACAQ9BZF9 1416 aa14.12□□□□□ -0.15
LINC01399-201ENST00000423311 LRRC9Q6ZRR7 1453 aa14.12□□□□□ -0.15
LINC01399-201ENST00000423311 ATP1B4Q9UN42 357 aaPredicted RBP14.11□□□□□ -0.15
LINC01399-201ENST00000423311 UHRF1BP1LA0JNW5 1464 aa14.11□□□□□ -0.15
LINC01399-201ENST00000423311 ABCC2Q92887 1545 aa14.1□□□□□ -0.15
LINC01399-201ENST00000423311 TTBK1Q5TCY1 1321 aaPredicted RBP14.09□□□□□ -0.15
LINC01399-201ENST00000423311 ARHGEF11O15085 1522 aa14.08□□□□□ -0.16
LINC01399-201ENST00000423311 EHBP1L1Q8N3D4 1523 aa14.08□□□□□ -0.16
LINC01399-201ENST00000423311 CDK13Q14004 1512 aaKnown RBP14.07□□□□□ -0.16
LINC01399-201ENST00000423311 KANK4Q5T7N3 995 aaPredicted RBP14.07□□□□□ -0.16
LINC01399-201ENST00000423311 SUPT6HQ7KZ85 1726 aaKnown RBP14.05□□□□□ -0.16
LINC01399-201ENST00000423311 CDK11AQ9UQ88 783 aaPredicted RBP14.05□□□□□ -0.16
LINC01399-201ENST00000423311 MTUS2Q5JR59 1369 aa14.05□□□□□ -0.16
LINC01399-201ENST00000423311 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
LINC01399-201ENST00000423311 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
LINC01399-201ENST00000423311 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
LINC01399-201ENST00000423311 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
LINC01399-201ENST00000423311 ATP10BO94823 1461 aa14.04□□□□□ -0.16
LINC01399-201ENST00000423311 ADCY10Q96PN6 1610 aa14.04□□□□□ -0.16
LINC01399-201ENST00000423311 TRIM26Q12899 539 aaPredicted RBP14.03□□□□□ -0.16
LINC01399-201ENST00000423311 KDM5BQ9UGL1 1544 aa14.03□□□□□ -0.16
LINC01399-201ENST00000423311 MAGI3Q5TCQ9 1506 aa14.02□□□□□ -0.16
LINC01399-201ENST00000423311 ZCCHC11Q5TAX3 1644 aaKnown RBP14.01□□□□□ -0.17
LINC01399-201ENST00000423311 TROQ12816 1431 aaPredicted RBP13.99□□□□□ -0.17
LINC01399-201ENST00000423311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
LINC01399-201ENST00000423311 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
LINC01399-201ENST00000423311 PLEKHD1A6NEE1 506 aa13.97□□□□□ -0.17
LINC01399-201ENST00000423311 NCOA2Q15596 1464 aa13.96□□□□□ -0.17
LINC01399-201ENST00000423311 KIF14Q15058 1648 aa13.95□□□□□ -0.18
LINC01399-201ENST00000423311 ARID3CA6NKF2 412 aa13.95□□□□□ -0.18
LINC01399-201ENST00000423311 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
LINC01399-201ENST00000423311 PHLDB1Q86UU1 1377 aa13.93□□□□□ -0.18
LINC01399-201ENST00000423311 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
LINC01399-201ENST00000423311 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
LINC01399-201ENST00000423311 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC01399-201ENST00000423311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC01399-201ENST00000423311 FGD6Q6ZV73 1430 aa13.89□□□□□ -0.19
LINC01399-201ENST00000423311 MIA2Q96PC5 1412 aa13.89□□□□□ -0.19
LINC01399-201ENST00000423311 ABCC10Q5T3U5 1492 aa13.88□□□□□ -0.19
LINC01399-201ENST00000423311 WDR7Q9Y4E6 1490 aa13.88□□□□□ -0.19
LINC01399-201ENST00000423311 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
LINC01399-201ENST00000423311 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
LINC01399-201ENST00000423311 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
LINC01399-201ENST00000423311 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
LINC01399-201ENST00000423311 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
LINC01399-201ENST00000423311 MYO5CQ9NQX4 1742 aa13.85□□□□□ -0.19
LINC01399-201ENST00000423311 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
LINC01399-201ENST00000423311 PTPN23Q9H3S7 1636 aa13.85□□□□□ -0.19
LINC01399-201ENST00000423311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC01399-201ENST00000423311 GPATCH8Q9UKJ3 1502 aaKnown RBP13.85□□□□□ -0.19
LINC01399-201ENST00000423311 PREX2Q70Z35 1606 aa13.84□□□□□ -0.19
LINC01399-201ENST00000423311 TCOF1Q13428 1488 aaKnown RBP13.84□□□□□ -0.19
LINC01399-201ENST00000423311 ABCA9Q8IUA7 1624 aa13.83□□□□□ -0.2
LINC01399-201ENST00000423311 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.2
LINC01399-201ENST00000423311 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.2
LINC01399-201ENST00000423311 ARAP3Q8WWN8 1544 aa13.81□□□□□ -0.2
LINC01399-201ENST00000423311 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
LINC01399-201ENST00000423311 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms