RNA–Protein interactions for RNA: ENST00000422285.6

PDHA1-206, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDHA1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-206ENST00000422285 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
PDHA1-206ENST00000422285 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
PDHA1-206ENST00000422285 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
PDHA1-206ENST00000422285 FBLN2P98095 1184 aa18.63■□□□□ 0.57
PDHA1-206ENST00000422285 TOPBP1Q92547 1522 aa18.63■□□□□ 0.57
PDHA1-206ENST00000422285 CHIC2Q9UKJ5 165 aa18.61■□□□□ 0.57
PDHA1-206ENST00000422285 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
PDHA1-206ENST00000422285 RAB3GAP2Q9H2M9 1393 aa18.59■□□□□ 0.57
PDHA1-206ENST00000422285 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
PDHA1-206ENST00000422285 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
PDHA1-206ENST00000422285 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
PDHA1-206ENST00000422285 RRP7BPQ9NSQ0 103 aa18.5■□□□□ 0.55
PDHA1-206ENST00000422285 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
PDHA1-206ENST00000422285 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
PDHA1-206ENST00000422285 LRRC9Q6ZRR7 1453 aa18.48■□□□□ 0.55
PDHA1-206ENST00000422285 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.553e-6■■■□□ 18.4
PDHA1-206ENST00000422285 PDS5BQ9NTI5 1447 aa18.48■□□□□ 0.55
PDHA1-206ENST00000422285 TRIM52Q96A61 297 aa18.48■□□□□ 0.55
PDHA1-206ENST00000422285 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
PDHA1-206ENST00000422285 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.55
PDHA1-206ENST00000422285 DDX10Q13206 875 aaKnown RBP18.46■□□□□ 0.55
PDHA1-206ENST00000422285 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
PDHA1-206ENST00000422285 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
PDHA1-206ENST00000422285 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
PDHA1-206ENST00000422285 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
PDHA1-206ENST00000422285 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
PDHA1-206ENST00000422285 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
PDHA1-206ENST00000422285 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.53
PDHA1-206ENST00000422285 ZNF777Q9ULD5 760 aaPredicted RBP18.36■□□□□ 0.53
PDHA1-206ENST00000422285 FOXD1Q16676 465 aa18.34■□□□□ 0.53
PDHA1-206ENST00000422285 CLSPNQ9HAW4 1339 aa18.34■□□□□ 0.53
PDHA1-206ENST00000422285 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
PDHA1-206ENST00000422285 FMN1Q68DA7 1419 aa18.32■□□□□ 0.52
PDHA1-206ENST00000422285 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
PDHA1-206ENST00000422285 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
PDHA1-206ENST00000422285 CASKIN1Q8WXD9 1431 aa18.29■□□□□ 0.52
PDHA1-206ENST00000422285 TONSLQ96HA7 1378 aa18.27■□□□□ 0.52
PDHA1-206ENST00000422285 ERCC6Q03468 1493 aa18.27■□□□□ 0.51
PDHA1-206ENST00000422285 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
PDHA1-206ENST00000422285 FYCO1Q9BQS8 1478 aa18.24■□□□□ 0.51
PDHA1-206ENST00000422285 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
PDHA1-206ENST00000422285 BCANQ96GW7 911 aa18.23■□□□□ 0.51
PDHA1-206ENST00000422285 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
PDHA1-206ENST00000422285 ZNF644Q9H582 1327 aaPredicted RBP18.22■□□□□ 0.51
PDHA1-206ENST00000422285 CUL7Q14999 1698 aa18.21■□□□□ 0.51
PDHA1-206ENST00000422285 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
PDHA1-206ENST00000422285 ZNF326Q5BKZ1 582 aaKnown RBP18.21■□□□□ 0.51
PDHA1-206ENST00000422285 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
PDHA1-206ENST00000422285 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
PDHA1-206ENST00000422285 CTTNBP2Q8WZ74 1663 aa18.18■□□□□ 0.5
PDHA1-206ENST00000422285 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
PDHA1-206ENST00000422285 CDK13Q14004 1512 aaKnown RBP18.18■□□□□ 0.5
PDHA1-206ENST00000422285 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
PDHA1-206ENST00000422285 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
PDHA1-206ENST00000422285 CCDC18Q5T9S5 1454 aa18.15■□□□□ 0.5
PDHA1-206ENST00000422285 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.49
PDHA1-206ENST00000422285 MAP3K1Q13233 1512 aa18.12■□□□□ 0.49
PDHA1-206ENST00000422285 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
PDHA1-206ENST00000422285 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
PDHA1-206ENST00000422285 CFAP43Q8NDM7 1665 aa18.12■□□□□ 0.49
PDHA1-206ENST00000422285 MYOM3Q5VTT5 1437 aa18.12■□□□□ 0.49
PDHA1-206ENST00000422285 ANP32CO43423 234 aa18.1■□□□□ 0.49
PDHA1-206ENST00000422285 GRIN2BQ13224 1484 aa18.08■□□□□ 0.48
PDHA1-206ENST00000422285 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
PDHA1-206ENST00000422285 CFDP1Q9UEE9 299 aaPredicted RBP18.07■□□□□ 0.48
PDHA1-206ENST00000422285 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
PDHA1-206ENST00000422285 CDK11AQ9UQ88 783 aaPredicted RBP18.06■□□□□ 0.48
PDHA1-206ENST00000422285 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
PDHA1-206ENST00000422285 MAGI3Q5TCQ9 1506 aa18.05■□□□□ 0.48
PDHA1-206ENST00000422285 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
PDHA1-206ENST00000422285 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
PDHA1-206ENST00000422285 NAIPQ13075 1403 aa18.03■□□□□ 0.48
PDHA1-206ENST00000422285 IQGAP2Q13576 1575 aa18.03■□□□□ 0.48
PDHA1-206ENST00000422285 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
PDHA1-206ENST00000422285 EPRSP07814 1512 aaKnown RBP18.02■□□□□ 0.47
PDHA1-206ENST00000422285 LRRIQ1Q96JM4 1722 aa18■□□□□ 0.47
PDHA1-206ENST00000422285 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
PDHA1-206ENST00000422285 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
PDHA1-206ENST00000422285 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
PDHA1-206ENST00000422285 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
PDHA1-206ENST00000422285 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
PDHA1-206ENST00000422285 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
PDHA1-206ENST00000422285 SAMD9Q5K651 1589 aa17.98■□□□□ 0.47
PDHA1-206ENST00000422285 HFM1A2PYH4 1435 aa17.98■□□□□ 0.47
PDHA1-206ENST00000422285 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
PDHA1-206ENST00000422285 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
PDHA1-206ENST00000422285 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
PDHA1-206ENST00000422285 IFT140Q96RY7 1462 aa17.96■□□□□ 0.46
PDHA1-206ENST00000422285 FKBP8Q14318 412 aa17.95■□□□□ 0.46
PDHA1-206ENST00000422285 KDM2AQ9Y2K7 1162 aa17.95■□□□□ 0.46
PDHA1-206ENST00000422285 PLB1Q6P1J6 1458 aa17.95■□□□□ 0.46
PDHA1-206ENST00000422285 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
PDHA1-206ENST00000422285 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
PDHA1-206ENST00000422285 IRX6P78412 446 aaPredicted RBP17.92■□□□□ 0.46
PDHA1-206ENST00000422285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.463e-6■■□□□ 12.7
PDHA1-206ENST00000422285 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
PDHA1-206ENST00000422285 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
PDHA1-206ENST00000422285 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
PDHA1-206ENST00000422285 HNRNPUQ00839 825 aaKnown RBP eCLIP17.9■□□□□ 0.46
PDHA1-206ENST00000422285 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms