RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 CTTNBP2Q8WZ74 1663 aa19.27■□□□□ 0.68
CAST-208ENST00000421689 KIAA0586Q9BVV6 1533 aa19.27■□□□□ 0.68
CAST-208ENST00000421689 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
CAST-208ENST00000421689 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
CAST-208ENST00000421689 IQGAP2Q13576 1575 aa19.22■□□□□ 0.67
CAST-208ENST00000421689 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
CAST-208ENST00000421689 JPH4Q96JJ6 628 aa19.18■□□□□ 0.66
CAST-208ENST00000421689 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
CAST-208ENST00000421689 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
CAST-208ENST00000421689 UGGT2Q9NYU1 1516 aa19.12■□□□□ 0.65
CAST-208ENST00000421689 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
CAST-208ENST00000421689 PRG4Q92954 1404 aaPredicted RBP19.1■□□□□ 0.65
CAST-208ENST00000421689 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
CAST-208ENST00000421689 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
CAST-208ENST00000421689 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
CAST-208ENST00000421689 RIMBP3CA6NJZ7 1639 aa19.04■□□□□ 0.64
CAST-208ENST00000421689 RIMBP3BA6NNM3 1639 aa19.04■□□□□ 0.64
CAST-208ENST00000421689 RIMBP3Q9UFD9 1639 aa19.04■□□□□ 0.64
CAST-208ENST00000421689 RANGAP1P46060 587 aaPredicted RBP19.04■□□□□ 0.64
CAST-208ENST00000421689 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
CAST-208ENST00000421689 KIAA0556O60303 1618 aa19.03■□□□□ 0.64
CAST-208ENST00000421689 SAMD9Q5K651 1589 aa19.02■□□□□ 0.63
CAST-208ENST00000421689 EFCAB5A4FU69 1503 aa19.01■□□□□ 0.63
CAST-208ENST00000421689 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
CAST-208ENST00000421689 CLIP1P30622 1438 aa18.96■□□□□ 0.63
CAST-208ENST00000421689 CEP162Q5TB80 1403 aa18.95■□□□□ 0.62
CAST-208ENST00000421689 ARHGAP35Q9NRY4 1499 aa18.95■□□□□ 0.62
CAST-208ENST00000421689 PTPRGP23470 1445 aa18.92■□□□□ 0.62
CAST-208ENST00000421689 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
CAST-208ENST00000421689 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
CAST-208ENST00000421689 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
CAST-208ENST00000421689 CYB5RLQ6IPT4 315 aa18.88■□□□□ 0.61
CAST-208ENST00000421689 FMN1Q68DA7 1419 aa18.83■□□□□ 0.6
CAST-208ENST00000421689 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
CAST-208ENST00000421689 ABCA8O94911 1581 aa18.79■□□□□ 0.6
CAST-208ENST00000421689 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
CAST-208ENST00000421689 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
CAST-208ENST00000421689 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.6
CAST-208ENST00000421689 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
CAST-208ENST00000421689 ADCY10Q96PN6 1610 aa18.76■□□□□ 0.59
CAST-208ENST00000421689 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
CAST-208ENST00000421689 CASKIN1Q8WXD9 1431 aa18.71■□□□□ 0.59
CAST-208ENST00000421689 PCF11O94913 1555 aaKnown RBP18.71■□□□□ 0.59
CAST-208ENST00000421689 HECW1Q76N89 1606 aa18.71■□□□□ 0.58
CAST-208ENST00000421689 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
CAST-208ENST00000421689 ATP1B4Q9UN42 357 aaPredicted RBP18.69■□□□□ 0.58
CAST-208ENST00000421689 NUP153P49790 1475 aaKnown RBP18.69■□□□□ 0.58
CAST-208ENST00000421689 FYCO1Q9BQS8 1478 aa18.68■□□□□ 0.58
CAST-208ENST00000421689 KDM5BQ9UGL1 1544 aa18.68■□□□□ 0.58
CAST-208ENST00000421689 ZCCHC11Q5TAX3 1644 aaKnown RBP18.66■□□□□ 0.58
CAST-208ENST00000421689 ATP10BO94823 1461 aa18.64■□□□□ 0.57
CAST-208ENST00000421689 EPRSP07814 1512 aaKnown RBP18.63■□□□□ 0.57
CAST-208ENST00000421689 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
CAST-208ENST00000421689 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
CAST-208ENST00000421689 CCDC18Q5T9S5 1454 aa18.61■□□□□ 0.57
CAST-208ENST00000421689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
CAST-208ENST00000421689 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
CAST-208ENST00000421689 CDK13Q14004 1512 aaKnown RBP18.59■□□□□ 0.57
CAST-208ENST00000421689 MAPKBP1O60336 1514 aa18.58■□□□□ 0.56
CAST-208ENST00000421689 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
CAST-208ENST00000421689 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
CAST-208ENST00000421689 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
CAST-208ENST00000421689 APLP2Q06481 763 aa18.53■□□□□ 0.56
CAST-208ENST00000421689 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.56
CAST-208ENST00000421689 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
CAST-208ENST00000421689 WDR7Q9Y4E6 1490 aa18.52■□□□□ 0.55
CAST-208ENST00000421689 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
CAST-208ENST00000421689 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
CAST-208ENST00000421689 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
CAST-208ENST00000421689 MAGI3Q5TCQ9 1506 aa18.45■□□□□ 0.54
CAST-208ENST00000421689 ABCC10Q5T3U5 1492 aa18.45■□□□□ 0.54
CAST-208ENST00000421689 MTUS2Q5JR59 1369 aa18.44■□□□□ 0.54
CAST-208ENST00000421689 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
CAST-208ENST00000421689 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
CAST-208ENST00000421689 LRRC9Q6ZRR7 1453 aa18.42■□□□□ 0.54
CAST-208ENST00000421689 KIF13AQ9H1H9 1805 aa18.41■□□□□ 0.54
CAST-208ENST00000421689 GLI2P10070 1586 aa18.41■□□□□ 0.54
CAST-208ENST00000421689 KIF14Q15058 1648 aa18.41■□□□□ 0.54
CAST-208ENST00000421689 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
CAST-208ENST00000421689 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
CAST-208ENST00000421689 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
CAST-208ENST00000421689 ABCA9Q8IUA7 1624 aa18.38■□□□□ 0.53
CAST-208ENST00000421689 SUPT6HQ7KZ85 1726 aaKnown RBP18.37■□□□□ 0.53
CAST-208ENST00000421689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.36■□□□□ 0.53
CAST-208ENST00000421689 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
CAST-208ENST00000421689 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.52
CAST-208ENST00000421689 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
CAST-208ENST00000421689 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
CAST-208ENST00000421689 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
CAST-208ENST00000421689 TSPOAP1O95153 1857 aa18.29■□□□□ 0.52
CAST-208ENST00000421689 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
CAST-208ENST00000421689 CDC42BPAQ5VT25 1732 aa18.28■□□□□ 0.52
CAST-208ENST00000421689 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
CAST-208ENST00000421689 PLCH2O75038 1416 aa18.26■□□□□ 0.51
CAST-208ENST00000421689 ITSN2Q9NZM3 1697 aa18.25■□□□□ 0.51
CAST-208ENST00000421689 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
CAST-208ENST00000421689 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
CAST-208ENST00000421689 PREX2Q70Z35 1606 aa18.25■□□□□ 0.51
CAST-208ENST00000421689 CDC42BPBQ9Y5S2 1711 aa18.25■□□□□ 0.51
CAST-208ENST00000421689 PPRC1Q5VV67 1664 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms