RNA–Protein interactions for RNA: ENST00000421601.2

LINC00443-201, long intergenic non-protein coding RNA 443, humanhuman

TSL 3 BASIC

Gene LINC00443, Length 1,170 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00443-201ENST00000421601 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
LINC00443-201ENST00000421601 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
LINC00443-201ENST00000421601 CUL7Q14999 1698 aa19.18■□□□□ 0.66
LINC00443-201ENST00000421601 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
LINC00443-201ENST00000421601 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
LINC00443-201ENST00000421601 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
LINC00443-201ENST00000421601 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
LINC00443-201ENST00000421601 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.64
LINC00443-201ENST00000421601 CHMP7Q8WUX9 453 aaPredicted RBP19.08■□□□□ 0.64
LINC00443-201ENST00000421601 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
LINC00443-201ENST00000421601 FBLN2P98095 1184 aa19.06■□□□□ 0.64
LINC00443-201ENST00000421601 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
LINC00443-201ENST00000421601 CLIP1P30622 1438 aa19■□□□□ 0.63
LINC00443-201ENST00000421601 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
LINC00443-201ENST00000421601 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
LINC00443-201ENST00000421601 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.61
LINC00443-201ENST00000421601 NUP160Q12769 1436 aa18.87■□□□□ 0.61
LINC00443-201ENST00000421601 P3H3Q8IVL6 736 aa18.87■□□□□ 0.61
LINC00443-201ENST00000421601 ARHGAP35Q9NRY4 1499 aa18.87■□□□□ 0.61
LINC00443-201ENST00000421601 CEP170Q5SW79 1584 aa18.86■□□□□ 0.61
LINC00443-201ENST00000421601 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
LINC00443-201ENST00000421601 CHD1O14646 1710 aa18.84■□□□□ 0.61
LINC00443-201ENST00000421601 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
LINC00443-201ENST00000421601 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
LINC00443-201ENST00000421601 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
LINC00443-201ENST00000421601 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
LINC00443-201ENST00000421601 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
LINC00443-201ENST00000421601 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.6
LINC00443-201ENST00000421601 FHOD3Q2V2M9 1422 aa18.75■□□□□ 0.59
LINC00443-201ENST00000421601 SAMD9Q5K651 1589 aa18.74■□□□□ 0.59
LINC00443-201ENST00000421601 OSCARQ8IYS5 282 aa18.71■□□□□ 0.59
LINC00443-201ENST00000421601 DISP1Q96F81 1524 aa18.69■□□□□ 0.58
LINC00443-201ENST00000421601 APLP2Q06481 763 aa18.67■□□□□ 0.58
LINC00443-201ENST00000421601 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
LINC00443-201ENST00000421601 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
LINC00443-201ENST00000421601 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
LINC00443-201ENST00000421601 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
LINC00443-201ENST00000421601 CLASP1Q7Z460 1538 aa18.65■□□□□ 0.58
LINC00443-201ENST00000421601 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
LINC00443-201ENST00000421601 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
LINC00443-201ENST00000421601 KIAA0556O60303 1618 aa18.64■□□□□ 0.57
LINC00443-201ENST00000421601 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
LINC00443-201ENST00000421601 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
LINC00443-201ENST00000421601 CASKIN1Q8WXD9 1431 aa18.59■□□□□ 0.57
LINC00443-201ENST00000421601 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
LINC00443-201ENST00000421601 FYCO1Q9BQS8 1478 aa18.54■□□□□ 0.56
LINC00443-201ENST00000421601 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
LINC00443-201ENST00000421601 PTPRGP23470 1445 aa18.54■□□□□ 0.56
LINC00443-201ENST00000421601 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
LINC00443-201ENST00000421601 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
LINC00443-201ENST00000421601 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
LINC00443-201ENST00000421601 PLB1Q6P1J6 1458 aa18.46■□□□□ 0.55
LINC00443-201ENST00000421601 ARID3CA6NKF2 412 aa18.46■□□□□ 0.55
LINC00443-201ENST00000421601 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
LINC00443-201ENST00000421601 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
LINC00443-201ENST00000421601 RAPGEF6Q8TEU7 1601 aa18.44■□□□□ 0.54
LINC00443-201ENST00000421601 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
LINC00443-201ENST00000421601 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
LINC00443-201ENST00000421601 ABCA8O94911 1581 aa18.42■□□□□ 0.54
LINC00443-201ENST00000421601 NUP153P49790 1475 aaKnown RBP18.41■□□□□ 0.54
LINC00443-201ENST00000421601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
LINC00443-201ENST00000421601 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
LINC00443-201ENST00000421601 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
LINC00443-201ENST00000421601 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
LINC00443-201ENST00000421601 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
LINC00443-201ENST00000421601 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
LINC00443-201ENST00000421601 CFAP43Q8NDM7 1665 aa18.38■□□□□ 0.53
LINC00443-201ENST00000421601 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
LINC00443-201ENST00000421601 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
LINC00443-201ENST00000421601 MTUS2Q5JR59 1369 aa18.35■□□□□ 0.53
LINC00443-201ENST00000421601 CDK11AQ9UQ88 783 aaPredicted RBP18.35■□□□□ 0.53
LINC00443-201ENST00000421601 ATP10BO94823 1461 aa18.34■□□□□ 0.53
LINC00443-201ENST00000421601 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
LINC00443-201ENST00000421601 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
LINC00443-201ENST00000421601 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
LINC00443-201ENST00000421601 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
LINC00443-201ENST00000421601 MAGI3Q5TCQ9 1506 aa18.29■□□□□ 0.52
LINC00443-201ENST00000421601 HOXD11P31277 338 aaPredicted RBP18.26■□□□□ 0.51
LINC00443-201ENST00000421601 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
LINC00443-201ENST00000421601 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
LINC00443-201ENST00000421601 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
LINC00443-201ENST00000421601 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
LINC00443-201ENST00000421601 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
LINC00443-201ENST00000421601 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
LINC00443-201ENST00000421601 ADCY10Q96PN6 1610 aa18.21■□□□□ 0.51
LINC00443-201ENST00000421601 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
LINC00443-201ENST00000421601 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
LINC00443-201ENST00000421601 RRBP1Q9P2E9 1410 aaKnown RBP18.17■□□□□ 0.5
LINC00443-201ENST00000421601 ZCCHC11Q5TAX3 1644 aaKnown RBP18.17■□□□□ 0.5
LINC00443-201ENST00000421601 KCNH8Q96L42 1107 aa18.16■□□□□ 0.5
LINC00443-201ENST00000421601 CCNB3Q8WWL7 1395 aa18.16■□□□□ 0.5
LINC00443-201ENST00000421601 MYOM3Q5VTT5 1437 aa18.14■□□□□ 0.49
LINC00443-201ENST00000421601 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
LINC00443-201ENST00000421601 KIF14Q15058 1648 aa18.11■□□□□ 0.49
LINC00443-201ENST00000421601 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
LINC00443-201ENST00000421601 ABCC10Q5T3U5 1492 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms