RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 CHD1O14646 1710 aa34.53■■■■□ 3.12
ABCF3-202ENST00000421340 CEP162Q5TB80 1403 aa34.53■■■■□ 3.12
ABCF3-202ENST00000421340 CTTNBP2Q8WZ74 1663 aa34.53■■■■□ 3.12
ABCF3-202ENST00000421340 CEP170Q5SW79 1584 aa34.53■■■■□ 3.12
ABCF3-202ENST00000421340 CLIP1P30622 1438 aa34.46■■■■□ 3.11
ABCF3-202ENST00000421340 IQGAP2Q13576 1575 aa34.45■■■■□ 3.1
ABCF3-202ENST00000421340 OSCARQ8IYS5 282 aa34.37■■■■□ 3.09
ABCF3-202ENST00000421340 UGGT2Q9NYU1 1516 aa34.35■■■■□ 3.09
ABCF3-202ENST00000421340 JPH4Q96JJ6 628 aa34.34■■■■□ 3.09
ABCF3-202ENST00000421340 RANGAP1P46060 587 aaPredicted RBP34.33■■■■□ 3.09
ABCF3-202ENST00000421340 EFCAB5A4FU69 1503 aa34.32■■■■□ 3.08
ABCF3-202ENST00000421340 CLASP1Q7Z460 1538 aa34.3■■■■□ 3.08
ABCF3-202ENST00000421340 ARHGAP35Q9NRY4 1499 aa34.3■■■■□ 3.08
ABCF3-202ENST00000421340 SAMD9Q5K651 1589 aa34.24■■■■□ 3.07
ABCF3-202ENST00000421340 SHROOM2Q13796 1616 aa34.19■■■■□ 3.06
ABCF3-202ENST00000421340 CARMIL2Q6F5E8 1435 aa34.18■■■■□ 3.06
ABCF3-202ENST00000421340 DISP1Q96F81 1524 aa34.17■■■■□ 3.06
ABCF3-202ENST00000421340 ARAP1Q96P48 1450 aa34.16■■■■□ 3.06
ABCF3-202ENST00000421340 PRG4Q92954 1404 aaPredicted RBP34.13■■■■□ 3.05
ABCF3-202ENST00000421340 P3H3Q8IVL6 736 aa34.11■■■■□ 3.05
ABCF3-202ENST00000421340 KIAA0556O60303 1618 aa34.09■■■■□ 3.05
ABCF3-202ENST00000421340 FHOD3Q2V2M9 1422 aa34.08■■■■□ 3.05
ABCF3-202ENST00000421340 VPS8Q8N3P4 1428 aa34.07■■■■□ 3.04
ABCF3-202ENST00000421340 FMN1Q68DA7 1419 aa34.04■■■■□ 3.04
ABCF3-202ENST00000421340 PTPRGP23470 1445 aa33.88■■■■□ 3.01
ABCF3-202ENST00000421340 CASKIN1Q8WXD9 1431 aa33.87■■■■□ 3.01
ABCF3-202ENST00000421340 ERCC6L2Q5T890 1561 aa33.87■■■■□ 3.01
ABCF3-202ENST00000421340 FYCO1Q9BQS8 1478 aa33.82■■■■□ 3
ABCF3-202ENST00000421340 TTBK1Q5TCY1 1321 aaPredicted RBP33.74■■■□□ 2.99
ABCF3-202ENST00000421340 PCF11O94913 1555 aaKnown RBP33.73■■■□□ 2.99
ABCF3-202ENST00000421340 APLP2Q06481 763 aa33.73■■■□□ 2.99
ABCF3-202ENST00000421340 ABCA8O94911 1581 aa33.7■■■□□ 2.99
ABCF3-202ENST00000421340 ARHGEF11O15085 1522 aa33.69■■■□□ 2.98
ABCF3-202ENST00000421340 MAP3K1Q13233 1512 aa33.69■■■□□ 2.98
ABCF3-202ENST00000421340 PLB1Q6P1J6 1458 aa33.69■■■□□ 2.98
ABCF3-202ENST00000421340 UACAQ9BZF9 1416 aa33.68■■■□□ 2.98
ABCF3-202ENST00000421340 RAPGEF6Q8TEU7 1601 aa33.68■■■□□ 2.98
ABCF3-202ENST00000421340 ATP1B4Q9UN42 357 aaPredicted RBP33.67■■■□□ 2.98
ABCF3-202ENST00000421340 HECW1Q76N89 1606 aa33.66■■■□□ 2.98
ABCF3-202ENST00000421340 UHRF1BP1LA0JNW5 1464 aa33.62■■■□□ 2.97
ABCF3-202ENST00000421340 NUP153P49790 1475 aaKnown RBP33.61■■■□□ 2.97
ABCF3-202ENST00000421340 CCDC18Q5T9S5 1454 aa33.61■■■□□ 2.97
ABCF3-202ENST00000421340 EPRSP07814 1512 aaKnown RBP33.58■■■□□ 2.97
ABCF3-202ENST00000421340 ABCC2Q92887 1545 aa33.56■■■□□ 2.96
ABCF3-202ENST00000421340 TIAM1Q13009 1591 aa33.54■■■□□ 2.96
ABCF3-202ENST00000421340 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
ABCF3-202ENST00000421340 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
ABCF3-202ENST00000421340 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
ABCF3-202ENST00000421340 ATP10BO94823 1461 aa33.47■■■□□ 2.95
ABCF3-202ENST00000421340 CFAP43Q8NDM7 1665 aa33.46■■■□□ 2.95
ABCF3-202ENST00000421340 CDK11AQ9UQ88 783 aaPredicted RBP33.46■■■□□ 2.95
ABCF3-202ENST00000421340 KANK4Q5T7N3 995 aaPredicted RBP33.45■■■□□ 2.95
ABCF3-202ENST00000421340 LRRIQ1Q96JM4 1722 aa33.45■■■□□ 2.94
ABCF3-202ENST00000421340 LRRC9Q6ZRR7 1453 aa33.44■■■□□ 2.94
ABCF3-202ENST00000421340 CDK13Q14004 1512 aaKnown RBP33.42■■■□□ 2.94
ABCF3-202ENST00000421340 KDM5BQ9UGL1 1544 aa33.42■■■□□ 2.94
ABCF3-202ENST00000421340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.39■■■□□ 2.94
ABCF3-202ENST00000421340 HNRNPUL2Q1KMD3 747 aaKnown RBP33.39■■■□□ 2.94
ABCF3-202ENST00000421340 ARID3CA6NKF2 412 aa33.38■■■□□ 2.93
ABCF3-202ENST00000421340 CYB5RLQ6IPT4 315 aa33.38■■■□□ 2.93
ABCF3-202ENST00000421340 ADCY10Q96PN6 1610 aa33.38■■■□□ 2.93
ABCF3-202ENST00000421340 MTUS2Q5JR59 1369 aa33.35■■■□□ 2.93
ABCF3-202ENST00000421340 PPARGC1BQ86YN6 1023 aaKnown RBP33.35■■■□□ 2.93
ABCF3-202ENST00000421340 PLEKHD1A6NEE1 506 aa33.33■■■□□ 2.93
ABCF3-202ENST00000421340 DNAJC5Q9H3Z4 198 aa33.32■■■□□ 2.92
ABCF3-202ENST00000421340 EHBP1L1Q8N3D4 1523 aa33.3■■■□□ 2.92
ABCF3-202ENST00000421340 NPM1P06748 294 aaKnown RBP eCLIP33.3■■■□□ 2.92
ABCF3-202ENST00000421340 MAGI3Q5TCQ9 1506 aa33.28■■■□□ 2.92
ABCF3-202ENST00000421340 TROQ12816 1431 aaPredicted RBP33.28■■■□□ 2.92
ABCF3-202ENST00000421340 ZCCHC11Q5TAX3 1644 aaKnown RBP33.24■■■□□ 2.91
ABCF3-202ENST00000421340 NCOA2Q15596 1464 aa33.13■■■□□ 2.89
ABCF3-202ENST00000421340 SUPT6HQ7KZ85 1726 aaKnown RBP33.13■■■□□ 2.89
ABCF3-202ENST00000421340 WDR7Q9Y4E6 1490 aa33.09■■■□□ 2.89
ABCF3-202ENST00000421340 ASXL2Q76L83 1435 aa33.09■■■□□ 2.89
ABCF3-202ENST00000421340 TRIM26Q12899 539 aaPredicted RBP33.06■■■□□ 2.88
ABCF3-202ENST00000421340 PHLDB1Q86UU1 1377 aa33.06■■■□□ 2.88
ABCF3-202ENST00000421340 MAPKBP1O60336 1514 aa33.04■■■□□ 2.88
ABCF3-202ENST00000421340 KIF14Q15058 1648 aa33.03■■■□□ 2.88
ABCF3-202ENST00000421340 ABCC10Q5T3U5 1492 aa33■■■□□ 2.87
ABCF3-202ENST00000421340 KCNH8Q96L42 1107 aa32.99■■■□□ 2.87
ABCF3-202ENST00000421340 MYOM3Q5VTT5 1437 aa32.99■■■□□ 2.87
ABCF3-202ENST00000421340 CCNB3Q8WWL7 1395 aa32.98■■■□□ 2.87
ABCF3-202ENST00000421340 RRBP1Q9P2E9 1410 aaKnown RBP32.97■■■□□ 2.87
ABCF3-202ENST00000421340 MIA2Q96PC5 1412 aa32.94■■■□□ 2.86
ABCF3-202ENST00000421340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.92■■■□□ 2.86
ABCF3-202ENST00000421340 GPATCH8Q9UKJ3 1502 aaKnown RBP32.92■■■□□ 2.86
ABCF3-202ENST00000421340 FGD6Q6ZV73 1430 aa32.9■■■□□ 2.86
ABCF3-202ENST00000421340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.88■■■□□ 2.85
ABCF3-202ENST00000421340 CFDP1Q9UEE9 299 aaPredicted RBP32.83■■■□□ 2.85
ABCF3-202ENST00000421340 ABCA9Q8IUA7 1624 aa32.82■■■□□ 2.84
ABCF3-202ENST00000421340 PLCH2O75038 1416 aa32.81■■■□□ 2.84
ABCF3-202ENST00000421340 TTC37Q6PGP7 1564 aa32.81■■■□□ 2.84
ABCF3-202ENST00000421340 ITSN2Q9NZM3 1697 aa32.81■■■□□ 2.84
ABCF3-202ENST00000421340 TCOF1Q13428 1488 aaKnown RBP32.79■■■□□ 2.84
ABCF3-202ENST00000421340 GLI2P10070 1586 aa32.78■■■□□ 2.84
ABCF3-202ENST00000421340 ARAP3Q8WWN8 1544 aa32.77■■■□□ 2.84
ABCF3-202ENST00000421340 CDC42BPAQ5VT25 1732 aa32.75■■■□□ 2.83
ABCF3-202ENST00000421340 PREX2Q70Z35 1606 aa32.73■■■□□ 2.83
ABCF3-202ENST00000421340 PTPN23Q9H3S7 1636 aa32.73■■■□□ 2.83
ABCF3-202ENST00000421340 FAM50AQ14320 339 aaKnown RBP32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms