RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
PPFIA3-202ENST00000421230 FBLN2P98095 1184 aa28.31■■■□□ 2.12
PPFIA3-202ENST00000421230 CTTNBP2Q8WZ74 1663 aa28.31■■■□□ 2.12
PPFIA3-202ENST00000421230 CHMP7Q8WUX9 453 aaPredicted RBP28.3■■■□□ 2.12
PPFIA3-202ENST00000421230 SYNJ2O15056 1496 aa28.29■■■□□ 2.12
PPFIA3-202ENST00000421230 ZEB1P37275 1124 aaPredicted RBP28.28■■■□□ 2.12
PPFIA3-202ENST00000421230 GRIN2AQ12879 1464 aa28.28■■■□□ 2.12
PPFIA3-202ENST00000421230 ARHGAP35Q9NRY4 1499 aa28.19■■■□□ 2.1
PPFIA3-202ENST00000421230 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
PPFIA3-202ENST00000421230 CEP170Q5SW79 1584 aa28.13■■■□□ 2.09
PPFIA3-202ENST00000421230 P3H3Q8IVL6 736 aa28.12■■■□□ 2.09
PPFIA3-202ENST00000421230 IQGAP2Q13576 1575 aa28.11■■■□□ 2.09
PPFIA3-202ENST00000421230 CHD1O14646 1710 aa28.11■■■□□ 2.09
PPFIA3-202ENST00000421230 KIAA0586Q9BVV6 1533 aa28.08■■■□□ 2.09
PPFIA3-202ENST00000421230 VPS8Q8N3P4 1428 aa28.08■■■□□ 2.09
PPFIA3-202ENST00000421230 NUP160Q12769 1436 aa28.06■■■□□ 2.08
PPFIA3-202ENST00000421230 EFCAB5A4FU69 1503 aa28.03■■■□□ 2.08
PPFIA3-202ENST00000421230 FHOD3Q2V2M9 1422 aa28.01■■■□□ 2.08
PPFIA3-202ENST00000421230 SAMD9Q5K651 1589 aa28■■■□□ 2.07
PPFIA3-202ENST00000421230 UGGT2Q9NYU1 1516 aa27.95■■■□□ 2.06
PPFIA3-202ENST00000421230 PELP1Q8IZL8 1130 aaKnown RBP27.95■■■□□ 2.06
PPFIA3-202ENST00000421230 JPH4Q96JJ6 628 aa27.9■■■□□ 2.06
PPFIA3-202ENST00000421230 DISP1Q96F81 1524 aa27.87■■■□□ 2.05
PPFIA3-202ENST00000421230 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
PPFIA3-202ENST00000421230 KIAA0556O60303 1618 aa27.83■■■□□ 2.05
PPFIA3-202ENST00000421230 APLP2Q06481 763 aa27.82■■■□□ 2.04
PPFIA3-202ENST00000421230 PCF11O94913 1555 aaKnown RBP27.8■■■□□ 2.04
PPFIA3-202ENST00000421230 FMN1Q68DA7 1419 aa27.8■■■□□ 2.04
PPFIA3-202ENST00000421230 ATP1B4Q9UN42 357 aaPredicted RBP27.79■■■□□ 2.04
PPFIA3-202ENST00000421230 SCAF1Q9H7N4 1312 aaKnown RBP27.75■■■□□ 2.03
PPFIA3-202ENST00000421230 CLASP1Q7Z460 1538 aa27.74■■■□□ 2.03
PPFIA3-202ENST00000421230 CARMIL2Q6F5E8 1435 aa27.74■■■□□ 2.03
PPFIA3-202ENST00000421230 PRG4Q92954 1404 aaPredicted RBP27.73■■■□□ 2.03
PPFIA3-202ENST00000421230 CASKIN1Q8WXD9 1431 aa27.73■■■□□ 2.03
PPFIA3-202ENST00000421230 FYCO1Q9BQS8 1478 aa27.7■■■□□ 2.03
PPFIA3-202ENST00000421230 SHROOM2Q13796 1616 aa27.7■■■□□ 2.02
PPFIA3-202ENST00000421230 KANK4Q5T7N3 995 aaPredicted RBP27.67■■■□□ 2.02
PPFIA3-202ENST00000421230 OSCARQ8IYS5 282 aa27.64■■■□□ 2.01
PPFIA3-202ENST00000421230 ERCC6L2Q5T890 1561 aa27.62■■■□□ 2.01
PPFIA3-202ENST00000421230 TIAM1Q13009 1591 aa27.62■■■□□ 2.01
PPFIA3-202ENST00000421230 LRRIQ1Q96JM4 1722 aa27.6■■■□□ 2.01
PPFIA3-202ENST00000421230 MAP3K1Q13233 1512 aa27.57■■■□□ 2
PPFIA3-202ENST00000421230 CFAP43Q8NDM7 1665 aa27.56■■■□□ 2
PPFIA3-202ENST00000421230 ARID3CA6NKF2 412 aa27.56■■■□□ 2
PPFIA3-202ENST00000421230 PLB1Q6P1J6 1458 aa27.55■■■□□ 2
PPFIA3-202ENST00000421230 HECW1Q76N89 1606 aa27.54■■■□□ 2
PPFIA3-202ENST00000421230 RAPGEF6Q8TEU7 1601 aa27.53■■■□□ 2
PPFIA3-202ENST00000421230 PTPRGP23470 1445 aa27.52■■■□□ 2
PPFIA3-202ENST00000421230 LRRC9Q6ZRR7 1453 aa27.5■■□□□ 1.99
PPFIA3-202ENST00000421230 EPRSP07814 1512 aaKnown RBP27.48■■□□□ 1.99
PPFIA3-202ENST00000421230 NUP153P49790 1475 aaKnown RBP27.48■■□□□ 1.99
PPFIA3-202ENST00000421230 CDK13Q14004 1512 aaKnown RBP27.47■■□□□ 1.99
PPFIA3-202ENST00000421230 CCDC18Q5T9S5 1454 aa27.45■■□□□ 1.98
PPFIA3-202ENST00000421230 ABCA8O94911 1581 aa27.44■■□□□ 1.98
PPFIA3-202ENST00000421230 MTUS2Q5JR59 1369 aa27.39■■□□□ 1.97
PPFIA3-202ENST00000421230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.39■■□□□ 1.97
PPFIA3-202ENST00000421230 HNRNPUL2Q1KMD3 747 aaKnown RBP27.39■■□□□ 1.97
PPFIA3-202ENST00000421230 MAGI3Q5TCQ9 1506 aa27.37■■□□□ 1.97
PPFIA3-202ENST00000421230 UACAQ9BZF9 1416 aa27.35■■□□□ 1.97
PPFIA3-202ENST00000421230 ACIN1Q9UKV3 1341 aaKnown RBP27.31■■□□□ 1.96
PPFIA3-202ENST00000421230 EHBP1L1Q8N3D4 1523 aa27.29■■□□□ 1.96
PPFIA3-202ENST00000421230 ATP10BO94823 1461 aa27.28■■□□□ 1.96
PPFIA3-202ENST00000421230 PHLDB1Q86UU1 1377 aa27.27■■□□□ 1.96
PPFIA3-202ENST00000421230 CCER1Q8TC90 406 aaPredicted RBP27.26■■□□□ 1.96
PPFIA3-202ENST00000421230 ABCC2Q92887 1545 aa27.26■■□□□ 1.95
PPFIA3-202ENST00000421230 CDK11AQ9UQ88 783 aaPredicted RBP27.24■■□□□ 1.95
PPFIA3-202ENST00000421230 SUPT6HQ7KZ85 1726 aaKnown RBP27.23■■□□□ 1.95
PPFIA3-202ENST00000421230 NCOA2Q15596 1464 aa27.22■■□□□ 1.95
PPFIA3-202ENST00000421230 NEUROD1Q13562 356 aa27.19■■□□□ 1.94
PPFIA3-202ENST00000421230 RRBP1Q9P2E9 1410 aaKnown RBP27.18■■□□□ 1.94
PPFIA3-202ENST00000421230 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
PPFIA3-202ENST00000421230 UHRF1BP1LA0JNW5 1464 aa27.17■■□□□ 1.94
PPFIA3-202ENST00000421230 TROQ12816 1431 aaPredicted RBP27.16■■□□□ 1.94
PPFIA3-202ENST00000421230 PLEKHD1A6NEE1 506 aa27.16■■□□□ 1.94
PPFIA3-202ENST00000421230 CCNB3Q8WWL7 1395 aa27.15■■□□□ 1.94
PPFIA3-202ENST00000421230 ADCY10Q96PN6 1610 aa27.14■■□□□ 1.94
PPFIA3-202ENST00000421230 ZCCHC11Q5TAX3 1644 aaKnown RBP27.1■■□□□ 1.93
PPFIA3-202ENST00000421230 DIEXFQ68CQ4 756 aaKnown RBP27.09■■□□□ 1.93
PPFIA3-202ENST00000421230 KIF14Q15058 1648 aa27.09■■□□□ 1.93
PPFIA3-202ENST00000421230 KDM5BQ9UGL1 1544 aa27.09■■□□□ 1.93
PPFIA3-202ENST00000421230 MYOM3Q5VTT5 1437 aa27.08■■□□□ 1.93
PPFIA3-202ENST00000421230 RIMBP3CA6NJZ7 1639 aa27.07■■□□□ 1.92
PPFIA3-202ENST00000421230 RIMBP3BA6NNM3 1639 aa27.07■■□□□ 1.92
PPFIA3-202ENST00000421230 RIMBP3Q9UFD9 1639 aa27.07■■□□□ 1.92
PPFIA3-202ENST00000421230 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
PPFIA3-202ENST00000421230 FGD6Q6ZV73 1430 aa27.06■■□□□ 1.92
PPFIA3-202ENST00000421230 ITGAEP38570 1179 aa27.02■■□□□ 1.92
PPFIA3-202ENST00000421230 CENPBP07199 599 aaPredicted RBP27.02■■□□□ 1.92
PPFIA3-202ENST00000421230 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
PPFIA3-202ENST00000421230 KCNH8Q96L42 1107 aa26.97■■□□□ 1.91
PPFIA3-202ENST00000421230 GTF3C3Q9Y5Q9 886 aa26.96■■□□□ 1.91
PPFIA3-202ENST00000421230 PTPN23Q9H3S7 1636 aa26.95■■□□□ 1.9
PPFIA3-202ENST00000421230 ABCC10Q5T3U5 1492 aa26.95■■□□□ 1.9
PPFIA3-202ENST00000421230 GPATCH8Q9UKJ3 1502 aaKnown RBP26.93■■□□□ 1.9
PPFIA3-202ENST00000421230 NPM1P06748 294 aaKnown RBP eCLIP26.92■■□□□ 1.9
PPFIA3-202ENST00000421230 MIA2Q96PC5 1412 aa26.91■■□□□ 1.9
PPFIA3-202ENST00000421230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.9■■□□□ 1.9
PPFIA3-202ENST00000421230 CDC42BPAQ5VT25 1732 aa26.88■■□□□ 1.89
PPFIA3-202ENST00000421230 MYT1Q01538 1121 aa26.88■■□□□ 1.89
PPFIA3-202ENST00000421230 CFDP1Q9UEE9 299 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms