RNA–Protein interactions for RNA: ENST00000420964.1

FAAP20-208, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-208ENST00000420964 TNIKQ9UKE5 1360 aa19.96■□□□□ 0.79
FAAP20-208ENST00000420964 CHD1O14646 1710 aa19.96■□□□□ 0.79
FAAP20-208ENST00000420964 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
FAAP20-208ENST00000420964 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
FAAP20-208ENST00000420964 FBLN2P98095 1184 aa19.91■□□□□ 0.78
FAAP20-208ENST00000420964 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
FAAP20-208ENST00000420964 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
FAAP20-208ENST00000420964 CEP162Q5TB80 1403 aa19.85■□□□□ 0.77
FAAP20-208ENST00000420964 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
FAAP20-208ENST00000420964 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
FAAP20-208ENST00000420964 NUP160Q12769 1436 aa19.8■□□□□ 0.76
FAAP20-208ENST00000420964 IQGAP2Q13576 1575 aa19.79■□□□□ 0.76
FAAP20-208ENST00000420964 CLIP1P30622 1438 aa19.77■□□□□ 0.76
FAAP20-208ENST00000420964 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
FAAP20-208ENST00000420964 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
FAAP20-208ENST00000420964 RANGAP1P46060 587 aaPredicted RBP19.72■□□□□ 0.75
FAAP20-208ENST00000420964 EFCAB5A4FU69 1503 aa19.71■□□□□ 0.75
FAAP20-208ENST00000420964 ARHGAP35Q9NRY4 1499 aa19.69■□□□□ 0.74
FAAP20-208ENST00000420964 SAMD9Q5K651 1589 aa19.69■□□□□ 0.74
FAAP20-208ENST00000420964 UGGT2Q9NYU1 1516 aa19.68■□□□□ 0.74
FAAP20-208ENST00000420964 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
FAAP20-208ENST00000420964 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
FAAP20-208ENST00000420964 KIAA0556O60303 1618 aa19.6■□□□□ 0.73
FAAP20-208ENST00000420964 DISP1Q96F81 1524 aa19.58■□□□□ 0.73
FAAP20-208ENST00000420964 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.72
FAAP20-208ENST00000420964 VPS8Q8N3P4 1428 aa19.56■□□□□ 0.72
FAAP20-208ENST00000420964 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
FAAP20-208ENST00000420964 P3H3Q8IVL6 736 aa19.53■□□□□ 0.72
FAAP20-208ENST00000420964 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
FAAP20-208ENST00000420964 CARMIL2Q6F5E8 1435 aa19.52■□□□□ 0.72
FAAP20-208ENST00000420964 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
FAAP20-208ENST00000420964 FMN1Q68DA7 1419 aa19.48■□□□□ 0.71
FAAP20-208ENST00000420964 PCF11O94913 1555 aaKnown RBP19.48■□□□□ 0.71
FAAP20-208ENST00000420964 FYCO1Q9BQS8 1478 aa19.42■□□□□ 0.7
FAAP20-208ENST00000420964 CASKIN1Q8WXD9 1431 aa19.41■□□□□ 0.7
FAAP20-208ENST00000420964 HECW1Q76N89 1606 aa19.37■□□□□ 0.69
FAAP20-208ENST00000420964 RAPGEF6Q8TEU7 1601 aa19.36■□□□□ 0.69
FAAP20-208ENST00000420964 CFAP43Q8NDM7 1665 aa19.34■□□□□ 0.69
FAAP20-208ENST00000420964 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
FAAP20-208ENST00000420964 PTPRGP23470 1445 aa19.34■□□□□ 0.69
FAAP20-208ENST00000420964 LRRIQ1Q96JM4 1722 aa19.33■□□□□ 0.68
FAAP20-208ENST00000420964 ABCA8O94911 1581 aa19.32■□□□□ 0.68
FAAP20-208ENST00000420964 PLB1Q6P1J6 1458 aa19.31■□□□□ 0.68
FAAP20-208ENST00000420964 TIAM1Q13009 1591 aa19.31■□□□□ 0.68
FAAP20-208ENST00000420964 MAP3K1Q13233 1512 aa19.3■□□□□ 0.68
FAAP20-208ENST00000420964 APLP2Q06481 763 aa19.29■□□□□ 0.68
FAAP20-208ENST00000420964 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
FAAP20-208ENST00000420964 NUP153P49790 1475 aaKnown RBP19.28■□□□□ 0.68
FAAP20-208ENST00000420964 CCDC18Q5T9S5 1454 aa19.28■□□□□ 0.68
FAAP20-208ENST00000420964 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
FAAP20-208ENST00000420964 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
FAAP20-208ENST00000420964 ABCC2Q92887 1545 aa19.24■□□□□ 0.67
FAAP20-208ENST00000420964 CDK13Q14004 1512 aaKnown RBP19.23■□□□□ 0.67
FAAP20-208ENST00000420964 UHRF1BP1LA0JNW5 1464 aa19.2■□□□□ 0.66
FAAP20-208ENST00000420964 PPARGC1BQ86YN6 1023 aaKnown RBP19.19■□□□□ 0.66
FAAP20-208ENST00000420964 LRRC9Q6ZRR7 1453 aa19.18■□□□□ 0.66
FAAP20-208ENST00000420964 ADCY10Q96PN6 1610 aa19.18■□□□□ 0.66
FAAP20-208ENST00000420964 ARID3CA6NKF2 412 aa19.16■□□□□ 0.66
FAAP20-208ENST00000420964 EHBP1L1Q8N3D4 1523 aa19.15■□□□□ 0.66
FAAP20-208ENST00000420964 KANK4Q5T7N3 995 aaPredicted RBP19.15■□□□□ 0.66
FAAP20-208ENST00000420964 KIF13AQ9H1H9 1805 aa19.15■□□□□ 0.66
FAAP20-208ENST00000420964 MAGI3Q5TCQ9 1506 aa19.14■□□□□ 0.65
FAAP20-208ENST00000420964 ATP10BO94823 1461 aa19.13■□□□□ 0.65
FAAP20-208ENST00000420964 ZCCHC11Q5TAX3 1644 aaKnown RBP19.12■□□□□ 0.65
FAAP20-208ENST00000420964 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
FAAP20-208ENST00000420964 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
FAAP20-208ENST00000420964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.08■□□□□ 0.64
FAAP20-208ENST00000420964 HNRNPUL2Q1KMD3 747 aaKnown RBP19.08■□□□□ 0.64
FAAP20-208ENST00000420964 SUPT6HQ7KZ85 1726 aaKnown RBP19.08■□□□□ 0.64
FAAP20-208ENST00000420964 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
FAAP20-208ENST00000420964 TROQ12816 1431 aaPredicted RBP19.05■□□□□ 0.64
FAAP20-208ENST00000420964 FAM69CQ0P6D2 419 aa19.02■□□□□ 0.64
FAAP20-208ENST00000420964 NCOA2Q15596 1464 aa19.02■□□□□ 0.63
FAAP20-208ENST00000420964 KIF14Q15058 1648 aa19.01■□□□□ 0.63
FAAP20-208ENST00000420964 ABCC10Q5T3U5 1492 aa19■□□□□ 0.63
FAAP20-208ENST00000420964 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
FAAP20-208ENST00000420964 PLEKHD1A6NEE1 506 aa18.98■□□□□ 0.63
FAAP20-208ENST00000420964 PHLDB1Q86UU1 1377 aa18.97■□□□□ 0.63
FAAP20-208ENST00000420964 MAPKBP1O60336 1514 aa18.97■□□□□ 0.63
FAAP20-208ENST00000420964 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
FAAP20-208ENST00000420964 DIP2BQ9P265 1576 aa18.95■□□□□ 0.62
FAAP20-208ENST00000420964 WDR7Q9Y4E6 1490 aa18.95■□□□□ 0.62
FAAP20-208ENST00000420964 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
FAAP20-208ENST00000420964 MYOM3Q5VTT5 1437 aa18.92■□□□□ 0.62
FAAP20-208ENST00000420964 ASXL2Q76L83 1435 aa18.92■□□□□ 0.62
FAAP20-208ENST00000420964 ITSN2Q9NZM3 1697 aa18.92■□□□□ 0.62
FAAP20-208ENST00000420964 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
FAAP20-208ENST00000420964 TTC37Q6PGP7 1564 aa18.89■□□□□ 0.62
FAAP20-208ENST00000420964 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
FAAP20-208ENST00000420964 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.61
FAAP20-208ENST00000420964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.88■□□□□ 0.61
FAAP20-208ENST00000420964 CDC42BPAQ5VT25 1732 aa18.88■□□□□ 0.61
FAAP20-208ENST00000420964 TSPOAP1O95153 1857 aa18.88■□□□□ 0.61
FAAP20-208ENST00000420964 MYO5CQ9NQX4 1742 aa18.85■□□□□ 0.61
FAAP20-208ENST00000420964 PREX2Q70Z35 1606 aa18.85■□□□□ 0.61
FAAP20-208ENST00000420964 GPATCH8Q9UKJ3 1502 aaKnown RBP18.84■□□□□ 0.61
FAAP20-208ENST00000420964 PTPN23Q9H3S7 1636 aa18.84■□□□□ 0.61
FAAP20-208ENST00000420964 ABCA9Q8IUA7 1624 aa18.83■□□□□ 0.61
FAAP20-208ENST00000420964 KCNH8Q96L42 1107 aa18.83■□□□□ 0.6
FAAP20-208ENST00000420964 MIA2Q96PC5 1412 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms