RNA–Protein interactions for RNA: ENST00000420421.1

PMS1-207, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-207ENST00000420421 PRXQ9BXM0 1461 aa8.32□□□□□ -1.08
PMS1-207ENST00000420421 GRIN2BQ13224 1484 aa8.32□□□□□ -1.08
PMS1-207ENST00000420421 CARMIL1Q5VZK9 1371 aa8.31□□□□□ -1.08
PMS1-207ENST00000420421 TNIKQ9UKE5 1360 aa8.3□□□□□ -1.08
PMS1-207ENST00000420421 RAPGEF2Q9Y4G8 1499 aa8.3□□□□□ -1.08
PMS1-207ENST00000420421 TDRD9Q8NDG6 1382 aaKnown RBP8.29□□□□□ -1.08
PMS1-207ENST00000420421 EIF4G3O43432 1585 aaKnown RBP8.29□□□□□ -1.08
PMS1-207ENST00000420421 MAGI1Q96QZ7 1491 aaPredicted RBP8.28□□□□□ -1.08
PMS1-207ENST00000420421 FHAD1B1AJZ9 1412 aa8.28□□□□□ -1.08
PMS1-207ENST00000420421 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.09
PMS1-207ENST00000420421 ZNF608Q9ULD9 1512 aaPredicted RBP8.26□□□□□ -1.09
PMS1-207ENST00000420421 LOC105371045A0A1W2PR82 267 aa8.26□□□□□ -1.09
PMS1-207ENST00000420421 CTTNBP2Q8WZ74 1663 aa8.26□□□□□ -1.09
PMS1-207ENST00000420421 ADAMTS12P58397 1594 aa8.26□□□□□ -1.09
PMS1-207ENST00000420421 UBTFP17480 764 aaKnown RBP8.25□□□□□ -1.09
PMS1-207ENST00000420421 SYNJ2O15056 1496 aa8.22□□□□□ -1.09
PMS1-207ENST00000420421 SNAPC4Q5SXM2 1469 aa8.21□□□□□ -1.09
PMS1-207ENST00000420421 RNF216Q9NWF9 866 aaPredicted RBP8.21□□□□□ -1.1
PMS1-207ENST00000420421 GRIN2AQ12879 1464 aa8.19□□□□□ -1.1
PMS1-207ENST00000420421 ATXN8OSP0DMR3 200 aa8.18□□□□□ -1.1
PMS1-207ENST00000420421 CHMP7Q8WUX9 453 aaPredicted RBP8.18□□□□□ -1.1
PMS1-207ENST00000420421 CEP162Q5TB80 1403 aa8.18□□□□□ -1.1
PMS1-207ENST00000420421 CHD1O14646 1710 aa8.17□□□□□ -1.1
PMS1-207ENST00000420421 EFCAB5A4FU69 1503 aa8.16□□□□□ -1.1
PMS1-207ENST00000420421 CLIP1P30622 1438 aa8.16□□□□□ -1.1
PMS1-207ENST00000420421 KIAA0586Q9BVV6 1533 aa8.16□□□□□ -1.1
PMS1-207ENST00000420421 IQGAP2Q13576 1575 aa8.15□□□□□ -1.1
PMS1-207ENST00000420421 NUP160Q12769 1436 aa8.15□□□□□ -1.1
PMS1-207ENST00000420421 MAPK8IP2Q13387 824 aaPredicted RBP8.14□□□□□ -1.11
PMS1-207ENST00000420421 UGGT2Q9NYU1 1516 aa8.13□□□□□ -1.11
PMS1-207ENST00000420421 SAMD9Q5K651 1589 aa8.12□□□□□ -1.11
PMS1-207ENST00000420421 CEP170Q5SW79 1584 aa8.11□□□□□ -1.11
PMS1-207ENST00000420421 MYCNP04198 464 aaPredicted RBP8.1□□□□□ -1.11
PMS1-207ENST00000420421 SLC4A2P04920 1241 aa8.1□□□□□ -1.11
PMS1-207ENST00000420421 FBLN2P98095 1184 aa8.1□□□□□ -1.11
PMS1-207ENST00000420421 ARHGAP35Q9NRY4 1499 aa8.1□□□□□ -1.11
PMS1-207ENST00000420421 VPS8Q8N3P4 1428 aa8.09□□□□□ -1.11
PMS1-207ENST00000420421 FMN1Q68DA7 1419 aa8.08□□□□□ -1.12
PMS1-207ENST00000420421 CARMIL2Q6F5E8 1435 aa8.08□□□□□ -1.12
PMS1-207ENST00000420421 SHROOM2Q13796 1616 aa8.07□□□□□ -1.12
PMS1-207ENST00000420421 JPH4Q96JJ6 628 aa8.07□□□□□ -1.12
PMS1-207ENST00000420421 ARAP1Q96P48 1450 aa8.06□□□□□ -1.12
PMS1-207ENST00000420421 CLASP1Q7Z460 1538 aa8.06□□□□□ -1.12
PMS1-207ENST00000420421 KIAA0556O60303 1618 aa8.06□□□□□ -1.12
PMS1-207ENST00000420421 MAP3K1Q13233 1512 aa8.05□□□□□ -1.12
PMS1-207ENST00000420421 PLCB2Q00722 1185 aa8.05□□□□□ -1.12
PMS1-207ENST00000420421 APLP2Q06481 763 aa8.05□□□□□ -1.12
PMS1-207ENST00000420421 OSCARQ8IYS5 282 aa8.04□□□□□ -1.12
PMS1-207ENST00000420421 DISP1Q96F81 1524 aa8.03□□□□□ -1.12
PMS1-207ENST00000420421 FYCO1Q9BQS8 1478 aa8.03□□□□□ -1.12
PMS1-207ENST00000420421 MSH5O43196 834 aa8.03□□□□□ -1.12
PMS1-207ENST00000420421 CASKIN1Q8WXD9 1431 aa8.03□□□□□ -1.12
PMS1-207ENST00000420421 RANGAP1P46060 587 aaPredicted RBP8.02□□□□□ -1.13
PMS1-207ENST00000420421 FHOD3Q2V2M9 1422 aa8.01□□□□□ -1.13
PMS1-207ENST00000420421 PRG4Q92954 1404 aaPredicted RBP8□□□□□ -1.13
PMS1-207ENST00000420421 CCDC18Q5T9S5 1454 aa8□□□□□ -1.13
PMS1-207ENST00000420421 HECW1Q76N89 1606 aa8□□□□□ -1.13
PMS1-207ENST00000420421 RAPGEF6Q8TEU7 1601 aa8□□□□□ -1.13
PMS1-207ENST00000420421 CFAP43Q8NDM7 1665 aa7.99□□□□□ -1.13
PMS1-207ENST00000420421 PCF11O94913 1555 aaKnown RBP7.98□□□□□ -1.13
PMS1-207ENST00000420421 HOXD11P31277 338 aaPredicted RBP7.98□□□□□ -1.13
PMS1-207ENST00000420421 P3H3Q8IVL6 736 aa7.98□□□□□ -1.13
PMS1-207ENST00000420421 TIAM1Q13009 1591 aa7.97□□□□□ -1.13
PMS1-207ENST00000420421 HAP1P54257 671 aaPredicted RBP7.97□□□□□ -1.13
PMS1-207ENST00000420421 BCANQ96GW7 911 aa7.97□□□□□ -1.13
PMS1-207ENST00000420421 PTPRGP23470 1445 aa7.96□□□□□ -1.13
PMS1-207ENST00000420421 LRRIQ1Q96JM4 1722 aa7.96□□□□□ -1.14
PMS1-207ENST00000420421 ABCA8O94911 1581 aa7.96□□□□□ -1.14
PMS1-207ENST00000420421 CDK11AQ9UQ88 783 aaPredicted RBP7.94□□□□□ -1.14
PMS1-207ENST00000420421 UHRF1BP1LA0JNW5 1464 aa7.94□□□□□ -1.14
PMS1-207ENST00000420421 EPRSP07814 1512 aaKnown RBP7.93□□□□□ -1.14
PMS1-207ENST00000420421 PRKCSHP14314 528 aaPredicted RBP7.93□□□□□ -1.14
PMS1-207ENST00000420421 UACAQ9BZF9 1416 aa7.93□□□□□ -1.14
PMS1-207ENST00000420421 LRRC9Q6ZRR7 1453 aa7.93□□□□□ -1.14
PMS1-207ENST00000420421 SUPT6HQ7KZ85 1726 aaKnown RBP7.92□□□□□ -1.14
PMS1-207ENST00000420421 TRIM26Q12899 539 aaPredicted RBP7.92□□□□□ -1.14
PMS1-207ENST00000420421 EHBP1L1Q8N3D4 1523 aa7.92□□□□□ -1.14
PMS1-207ENST00000420421 ABCC2Q92887 1545 aa7.92□□□□□ -1.14
PMS1-207ENST00000420421 ATP1B4Q9UN42 357 aaPredicted RBP7.91□□□□□ -1.14
PMS1-207ENST00000420421 NUP153P49790 1475 aaKnown RBP7.91□□□□□ -1.14
PMS1-207ENST00000420421 ERCC6L2Q5T890 1561 aa7.9□□□□□ -1.14
PMS1-207ENST00000420421 PLB1Q6P1J6 1458 aa7.9□□□□□ -1.14
PMS1-207ENST00000420421 MTUS2Q5JR59 1369 aa7.89□□□□□ -1.15
PMS1-207ENST00000420421 TAOK2Q9UL54 1235 aa7.89□□□□□ -1.15
PMS1-207ENST00000420421 DMRT2Q9Y5R5 561 aa7.89□□□□□ -1.15
PMS1-207ENST00000420421 ADCY10Q96PN6 1610 aa7.89□□□□□ -1.15
PMS1-207ENST00000420421 ARHGEF11O15085 1522 aa7.88□□□□□ -1.15
PMS1-207ENST00000420421 KDM5BQ9UGL1 1544 aa7.88□□□□□ -1.15
PMS1-207ENST00000420421 ATP10BO94823 1461 aa7.87□□□□□ -1.15
PMS1-207ENST00000420421 PLEKHD1A6NEE1 506 aa7.87□□□□□ -1.15
PMS1-207ENST00000420421 KANK4Q5T7N3 995 aaPredicted RBP7.87□□□□□ -1.15
PMS1-207ENST00000420421 TROQ12816 1431 aaPredicted RBP7.86□□□□□ -1.15
PMS1-207ENST00000420421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.86□□□□□ -1.15
PMS1-207ENST00000420421 RIMBP3CA6NJZ7 1639 aa7.86□□□□□ -1.15
PMS1-207ENST00000420421 RIMBP3BA6NNM3 1639 aa7.86□□□□□ -1.15
PMS1-207ENST00000420421 RIMBP3Q9UFD9 1639 aa7.86□□□□□ -1.15
PMS1-207ENST00000420421 ITSN2Q9NZM3 1697 aa7.86□□□□□ -1.15
PMS1-207ENST00000420421 ZCCHC11Q5TAX3 1644 aaKnown RBP7.85□□□□□ -1.15
PMS1-207ENST00000420421 CDK13Q14004 1512 aaKnown RBP7.85□□□□□ -1.15
PMS1-207ENST00000420421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms