RNA–Protein interactions for RNA: ENST00000419986.1

VIL1-203, Transcript of villin 1, humanhuman

TSL 3

Gene VIL1, Length 639 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-203ENST00000419986 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
VIL1-203ENST00000419986 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
VIL1-203ENST00000419986 SHROOM2Q13796 1616 aa20.74■□□□□ 0.91
VIL1-203ENST00000419986 KIAA0586Q9BVV6 1533 aa20.73■□□□□ 0.91
VIL1-203ENST00000419986 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
VIL1-203ENST00000419986 JPH4Q96JJ6 628 aa20.67■□□□□ 0.9
VIL1-203ENST00000419986 KIF21BO75037 1637 aa20.64■□□□□ 0.9
VIL1-203ENST00000419986 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
VIL1-203ENST00000419986 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
VIL1-203ENST00000419986 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
VIL1-203ENST00000419986 CTTNBP2Q8WZ74 1663 aa20.6■□□□□ 0.89
VIL1-203ENST00000419986 UGGT2Q9NYU1 1516 aa20.56■□□□□ 0.88
VIL1-203ENST00000419986 CYB5RLQ6IPT4 315 aa20.53■□□□□ 0.88
VIL1-203ENST00000419986 DISP1Q96F81 1524 aa20.52■□□□□ 0.87
VIL1-203ENST00000419986 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
VIL1-203ENST00000419986 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
VIL1-203ENST00000419986 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
VIL1-203ENST00000419986 KIAA0556O60303 1618 aa20.45■□□□□ 0.86
VIL1-203ENST00000419986 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
VIL1-203ENST00000419986 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
VIL1-203ENST00000419986 SAMD9Q5K651 1589 aa20.38■□□□□ 0.85
VIL1-203ENST00000419986 PTPRGP23470 1445 aa20.38■□□□□ 0.85
VIL1-203ENST00000419986 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
VIL1-203ENST00000419986 RANGAP1P46060 587 aaPredicted RBP20.3■□□□□ 0.84
VIL1-203ENST00000419986 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
VIL1-203ENST00000419986 TTBK1Q5TCY1 1321 aaPredicted RBP20.29■□□□□ 0.84
VIL1-203ENST00000419986 EFCAB5A4FU69 1503 aa20.28■□□□□ 0.84
VIL1-203ENST00000419986 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
VIL1-203ENST00000419986 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
VIL1-203ENST00000419986 UACAQ9BZF9 1416 aa20.26■□□□□ 0.83
VIL1-203ENST00000419986 UHRF1BP1LA0JNW5 1464 aa20.25■□□□□ 0.83
VIL1-203ENST00000419986 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
VIL1-203ENST00000419986 ABCA8O94911 1581 aa20.24■□□□□ 0.83
VIL1-203ENST00000419986 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
VIL1-203ENST00000419986 ABCC2Q92887 1545 aa20.23■□□□□ 0.83
VIL1-203ENST00000419986 KDM5BQ9UGL1 1544 aa20.17■□□□□ 0.82
VIL1-203ENST00000419986 CLIP1P30622 1438 aa20.15■□□□□ 0.82
VIL1-203ENST00000419986 MAPKBP1O60336 1514 aa20.13■□□□□ 0.81
VIL1-203ENST00000419986 RAPGEF6Q8TEU7 1601 aa20.13■□□□□ 0.81
VIL1-203ENST00000419986 NPM1P06748 294 aaKnown RBP eCLIP20.12■□□□□ 0.81
VIL1-203ENST00000419986 CEP162Q5TB80 1403 aa20.11■□□□□ 0.81
VIL1-203ENST00000419986 ZCCHC11Q5TAX3 1644 aaKnown RBP20.1■□□□□ 0.81
VIL1-203ENST00000419986 NUP153P49790 1475 aaKnown RBP20.09■□□□□ 0.81
VIL1-203ENST00000419986 FMN1Q68DA7 1419 aa20.09■□□□□ 0.81
VIL1-203ENST00000419986 ATP10BO94823 1461 aa20.07■□□□□ 0.8
VIL1-203ENST00000419986 ASXL2Q76L83 1435 aa20.05■□□□□ 0.8
VIL1-203ENST00000419986 ABCC10Q5T3U5 1492 aa20.01■□□□□ 0.79
VIL1-203ENST00000419986 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
VIL1-203ENST00000419986 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
VIL1-203ENST00000419986 DIP2BQ9P265 1576 aa20■□□□□ 0.79
VIL1-203ENST00000419986 KIF13AQ9H1H9 1805 aa19.99■□□□□ 0.79
VIL1-203ENST00000419986 PCF11O94913 1555 aaKnown RBP19.99■□□□□ 0.79
VIL1-203ENST00000419986 CASKIN1Q8WXD9 1431 aa19.98■□□□□ 0.79
VIL1-203ENST00000419986 HECW1Q76N89 1606 aa19.97■□□□□ 0.79
VIL1-203ENST00000419986 WDR7Q9Y4E6 1490 aa19.97■□□□□ 0.79
VIL1-203ENST00000419986 CDK13Q14004 1512 aaKnown RBP19.96■□□□□ 0.79
VIL1-203ENST00000419986 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
VIL1-203ENST00000419986 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
VIL1-203ENST00000419986 FAM69CQ0P6D2 419 aa19.93■□□□□ 0.78
VIL1-203ENST00000419986 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
VIL1-203ENST00000419986 GLI2P10070 1586 aa19.92■□□□□ 0.78
VIL1-203ENST00000419986 ATP1B4Q9UN42 357 aaPredicted RBP19.9■□□□□ 0.78
VIL1-203ENST00000419986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.88■□□□□ 0.77
VIL1-203ENST00000419986 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
VIL1-203ENST00000419986 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
VIL1-203ENST00000419986 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
VIL1-203ENST00000419986 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
VIL1-203ENST00000419986 PLEKHD1A6NEE1 506 aa19.84■□□□□ 0.77
VIL1-203ENST00000419986 MAP3K4Q9Y6R4 1608 aa19.84■□□□□ 0.77
VIL1-203ENST00000419986 MAGI3Q5TCQ9 1506 aa19.81■□□□□ 0.76
VIL1-203ENST00000419986 PPRC1Q5VV67 1664 aaKnown RBP19.81■□□□□ 0.76
VIL1-203ENST00000419986 ABCA9Q8IUA7 1624 aa19.8■□□□□ 0.76
VIL1-203ENST00000419986 CFAP43Q8NDM7 1665 aa19.78■□□□□ 0.76
VIL1-203ENST00000419986 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
VIL1-203ENST00000419986 TSPOAP1O95153 1857 aa19.77■□□□□ 0.76
VIL1-203ENST00000419986 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
VIL1-203ENST00000419986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.76■□□□□ 0.75
VIL1-203ENST00000419986 CD109Q6YHK3 1445 aa19.76■□□□□ 0.75
VIL1-203ENST00000419986 KIF14Q15058 1648 aa19.74■□□□□ 0.75
VIL1-203ENST00000419986 TTC37Q6PGP7 1564 aa19.73■□□□□ 0.75
VIL1-203ENST00000419986 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
VIL1-203ENST00000419986 MAP3K1Q13233 1512 aa19.68■□□□□ 0.74
VIL1-203ENST00000419986 TEX14Q8IWB6 1497 aa19.67■□□□□ 0.74
VIL1-203ENST00000419986 MTUS2Q5JR59 1369 aa19.65■□□□□ 0.74
VIL1-203ENST00000419986 COL17A1Q9UMD9 1497 aaPredicted RBP19.64■□□□□ 0.73
VIL1-203ENST00000419986 EHBP1L1Q8N3D4 1523 aa19.64■□□□□ 0.73
VIL1-203ENST00000419986 PLCH2O75038 1416 aa19.63■□□□□ 0.73
VIL1-203ENST00000419986 LRRC9Q6ZRR7 1453 aa19.62■□□□□ 0.73
VIL1-203ENST00000419986 KANK4Q5T7N3 995 aaPredicted RBP19.62■□□□□ 0.73
VIL1-203ENST00000419986 MYO5CQ9NQX4 1742 aa19.6■□□□□ 0.73
VIL1-203ENST00000419986 ARAP3Q8WWN8 1544 aa19.6■□□□□ 0.73
VIL1-203ENST00000419986 NEO1Q92859 1461 aa19.6■□□□□ 0.73
VIL1-203ENST00000419986 KDM6BO15054 1643 aa19.59■□□□□ 0.73
VIL1-203ENST00000419986 FANCAO15360 1455 aa19.58■□□□□ 0.72
VIL1-203ENST00000419986 CDC42BPAQ5VT25 1732 aa19.56■□□□□ 0.72
VIL1-203ENST00000419986 CDC42BPBQ9Y5S2 1711 aa19.56■□□□□ 0.72
VIL1-203ENST00000419986 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
VIL1-203ENST00000419986 PREX2Q70Z35 1606 aa19.56■□□□□ 0.72
VIL1-203ENST00000419986 PHLDB1Q86UU1 1377 aa19.56■□□□□ 0.72
VIL1-203ENST00000419986 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms