RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CHD1O14646 1710 aa18.09■□□□□ 0.49
RFC1-203ENST00000418436 C1QBPQ07021 282 aaKnown RBP18.04■□□□□ 0.48
RFC1-203ENST00000418436 ERICH3Q5RHP9 1530 aa18.02■□□□□ 0.47
RFC1-203ENST00000418436 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
RFC1-203ENST00000418436 FBLN2P98095 1184 aa17.98■□□□□ 0.47
RFC1-203ENST00000418436 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
RFC1-203ENST00000418436 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
RFC1-203ENST00000418436 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
RFC1-203ENST00000418436 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
RFC1-203ENST00000418436 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
RFC1-203ENST00000418436 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
RFC1-203ENST00000418436 IGF1RP08069 1367 aa17.9■□□□□ 0.46
RFC1-203ENST00000418436 CLASP1Q7Z460 1538 aa17.89■□□□□ 0.45
RFC1-203ENST00000418436 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
RFC1-203ENST00000418436 CUL7Q14999 1698 aa17.87■□□□□ 0.45
RFC1-203ENST00000418436 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
RFC1-203ENST00000418436 NUP160Q12769 1436 aa17.83■□□□□ 0.45
RFC1-203ENST00000418436 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
RFC1-203ENST00000418436 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
RFC1-203ENST00000418436 RIMBP3CA6NJZ7 1639 aa17.82■□□□□ 0.44
RFC1-203ENST00000418436 RIMBP3BA6NNM3 1639 aa17.82■□□□□ 0.44
RFC1-203ENST00000418436 RIMBP3Q9UFD9 1639 aa17.82■□□□□ 0.44
RFC1-203ENST00000418436 ARHGEF11O15085 1522 aa17.81■□□□□ 0.44
RFC1-203ENST00000418436 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
RFC1-203ENST00000418436 CARMIL1Q5VZK9 1371 aa17.78■□□□□ 0.44
RFC1-203ENST00000418436 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
RFC1-203ENST00000418436 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
RFC1-203ENST00000418436 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
RFC1-203ENST00000418436 KIAA0586Q9BVV6 1533 aa17.67■□□□□ 0.42
RFC1-203ENST00000418436 EEA1Q15075 1411 aa17.65■□□□□ 0.42
RFC1-203ENST00000418436 PRXQ9BXM0 1461 aa17.65■□□□□ 0.42
RFC1-203ENST00000418436 ERCC6L2Q5T890 1561 aa17.63■□□□□ 0.41
RFC1-203ENST00000418436 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
RFC1-203ENST00000418436 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
RFC1-203ENST00000418436 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
RFC1-203ENST00000418436 PRG4Q92954 1404 aaPredicted RBP17.59■□□□□ 0.41
RFC1-203ENST00000418436 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
RFC1-203ENST00000418436 CTTNBP2Q8WZ74 1663 aa17.55■□□□□ 0.4
RFC1-203ENST00000418436 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
RFC1-203ENST00000418436 UGGT2Q9NYU1 1516 aa17.5■□□□□ 0.39
RFC1-203ENST00000418436 KIF21BO75037 1637 aa17.49■□□□□ 0.39
RFC1-203ENST00000418436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
RFC1-203ENST00000418436 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
RFC1-203ENST00000418436 DISP1Q96F81 1524 aa17.46■□□□□ 0.39
RFC1-203ENST00000418436 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
RFC1-203ENST00000418436 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
RFC1-203ENST00000418436 FOXD4L1Q9NU39 408 aa17.44■□□□□ 0.38
RFC1-203ENST00000418436 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
RFC1-203ENST00000418436 KIAA0556O60303 1618 aa17.41■□□□□ 0.38
RFC1-203ENST00000418436 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
RFC1-203ENST00000418436 APLP2Q06481 763 aa17.4■□□□□ 0.38
RFC1-203ENST00000418436 CAPN15O75808 1086 aa17.39■□□□□ 0.37
RFC1-203ENST00000418436 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
RFC1-203ENST00000418436 PTPRGP23470 1445 aa17.38■□□□□ 0.37
RFC1-203ENST00000418436 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
RFC1-203ENST00000418436 ADCY10Q96PN6 1610 aa17.35■□□□□ 0.37
RFC1-203ENST00000418436 SAMD9Q5K651 1589 aa17.32■□□□□ 0.36
RFC1-203ENST00000418436 UHRF1BP1LA0JNW5 1464 aa17.29■□□□□ 0.36
RFC1-203ENST00000418436 ZBTB22O15209 634 aa17.28■□□□□ 0.36
RFC1-203ENST00000418436 UACAQ9BZF9 1416 aa17.28■□□□□ 0.36
RFC1-203ENST00000418436 TTBK1Q5TCY1 1321 aaPredicted RBP17.27■□□□□ 0.36
RFC1-203ENST00000418436 UBTFP17480 764 aaKnown RBP17.26■□□□□ 0.35
RFC1-203ENST00000418436 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
RFC1-203ENST00000418436 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
RFC1-203ENST00000418436 MAPKBP1O60336 1514 aa17.24■□□□□ 0.35
RFC1-203ENST00000418436 ABCA8O94911 1581 aa17.23■□□□□ 0.35
RFC1-203ENST00000418436 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
RFC1-203ENST00000418436 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
RFC1-203ENST00000418436 DSG3P32926 999 aa17.23■□□□□ 0.35
RFC1-203ENST00000418436 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
RFC1-203ENST00000418436 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
RFC1-203ENST00000418436 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.35
RFC1-203ENST00000418436 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
RFC1-203ENST00000418436 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.34
RFC1-203ENST00000418436 RANGAP1P46060 587 aaPredicted RBP17.19■□□□□ 0.34
RFC1-203ENST00000418436 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
RFC1-203ENST00000418436 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
RFC1-203ENST00000418436 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
RFC1-203ENST00000418436 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
RFC1-203ENST00000418436 ABCC10Q5T3U5 1492 aa17.14■□□□□ 0.33
RFC1-203ENST00000418436 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
RFC1-203ENST00000418436 DIP2BQ9P265 1576 aa17.12■□□□□ 0.33
RFC1-203ENST00000418436 ASXL2Q76L83 1435 aa17.12■□□□□ 0.33
RFC1-203ENST00000418436 ATP10BO94823 1461 aa17.07■□□□□ 0.32
RFC1-203ENST00000418436 NUP153P49790 1475 aaKnown RBP17.06■□□□□ 0.32
RFC1-203ENST00000418436 FAM69CQ0P6D2 419 aa17.06■□□□□ 0.32
RFC1-203ENST00000418436 GLI2P10070 1586 aa17.06■□□□□ 0.32
RFC1-203ENST00000418436 FMN1Q68DA7 1419 aa17.05■□□□□ 0.32
RFC1-203ENST00000418436 WDR7Q9Y4E6 1490 aa17.04■□□□□ 0.32
RFC1-203ENST00000418436 CLIP1P30622 1438 aa17.04■□□□□ 0.32
RFC1-203ENST00000418436 EPRSP07814 1512 aaKnown RBP17.03■□□□□ 0.32
RFC1-203ENST00000418436 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
RFC1-203ENST00000418436 ABCB7O75027 752 aa17.01■□□□□ 0.31
RFC1-203ENST00000418436 ARID3CA6NKF2 412 aa16.99■□□□□ 0.31
RFC1-203ENST00000418436 HECW1Q76N89 1606 aa16.98■□□□□ 0.31
RFC1-203ENST00000418436 MAP3K4Q9Y6R4 1608 aa16.98■□□□□ 0.31
RFC1-203ENST00000418436 TSPOAP1O95153 1857 aa16.97■□□□□ 0.31
RFC1-203ENST00000418436 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
RFC1-203ENST00000418436 PPRC1Q5VV67 1664 aaKnown RBP16.95■□□□□ 0.3
RFC1-203ENST00000418436 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms