RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
SYNC-203ENST00000417633 KIAA0586Q9BVV6 1533 aa18.8■□□□□ 0.6
SYNC-203ENST00000417633 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
SYNC-203ENST00000417633 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
SYNC-203ENST00000417633 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
SYNC-203ENST00000417633 IQGAP2Q13576 1575 aa18.72■□□□□ 0.59
SYNC-203ENST00000417633 JPH4Q96JJ6 628 aa18.71■□□□□ 0.59
SYNC-203ENST00000417633 UGGT2Q9NYU1 1516 aa18.67■□□□□ 0.58
SYNC-203ENST00000417633 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
SYNC-203ENST00000417633 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
SYNC-203ENST00000417633 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
SYNC-203ENST00000417633 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
SYNC-203ENST00000417633 CLIP1P30622 1438 aa18.57■□□□□ 0.56
SYNC-203ENST00000417633 CARMIL2Q6F5E8 1435 aa18.57■□□□□ 0.56
SYNC-203ENST00000417633 SAMD9Q5K651 1589 aa18.57■□□□□ 0.56
SYNC-203ENST00000417633 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
SYNC-203ENST00000417633 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
SYNC-203ENST00000417633 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
SYNC-203ENST00000417633 DNAJC5Q9H3Z4 198 aa18.55■□□□□ 0.56
SYNC-203ENST00000417633 KIAA0556O60303 1618 aa18.54■□□□□ 0.56
SYNC-203ENST00000417633 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
SYNC-203ENST00000417633 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
SYNC-203ENST00000417633 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
SYNC-203ENST00000417633 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
SYNC-203ENST00000417633 ARAP1Q96P48 1450 aa18.46■□□□□ 0.55
SYNC-203ENST00000417633 PTPRGP23470 1445 aa18.44■□□□□ 0.54
SYNC-203ENST00000417633 RIMBP3CA6NJZ7 1639 aa18.43■□□□□ 0.54
SYNC-203ENST00000417633 RIMBP3BA6NNM3 1639 aa18.43■□□□□ 0.54
SYNC-203ENST00000417633 RIMBP3Q9UFD9 1639 aa18.43■□□□□ 0.54
SYNC-203ENST00000417633 FMN1Q68DA7 1419 aa18.41■□□□□ 0.54
SYNC-203ENST00000417633 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
SYNC-203ENST00000417633 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
SYNC-203ENST00000417633 ABCA8O94911 1581 aa18.34■□□□□ 0.53
SYNC-203ENST00000417633 UACAQ9BZF9 1416 aa18.33■□□□□ 0.53
SYNC-203ENST00000417633 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
SYNC-203ENST00000417633 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
SYNC-203ENST00000417633 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
SYNC-203ENST00000417633 UHRF1BP1LA0JNW5 1464 aa18.31■□□□□ 0.52
SYNC-203ENST00000417633 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
SYNC-203ENST00000417633 ABCC2Q92887 1545 aa18.28■□□□□ 0.52
SYNC-203ENST00000417633 FYCO1Q9BQS8 1478 aa18.27■□□□□ 0.52
SYNC-203ENST00000417633 PCF11O94913 1555 aaKnown RBP18.26■□□□□ 0.51
SYNC-203ENST00000417633 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
SYNC-203ENST00000417633 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
SYNC-203ENST00000417633 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
SYNC-203ENST00000417633 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
SYNC-203ENST00000417633 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
SYNC-203ENST00000417633 ATP10BO94823 1461 aa18.2■□□□□ 0.5
SYNC-203ENST00000417633 EPRSP07814 1512 aaKnown RBP18.2■□□□□ 0.5
SYNC-203ENST00000417633 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
SYNC-203ENST00000417633 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
SYNC-203ENST00000417633 LRRIQ1Q96JM4 1722 aa18.18■□□□□ 0.5
SYNC-203ENST00000417633 NPM1P06748 294 aaKnown RBP eCLIP18.16■□□□□ 0.5
SYNC-203ENST00000417633 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
SYNC-203ENST00000417633 APLP2Q06481 763 aa18.14■□□□□ 0.49
SYNC-203ENST00000417633 CDK13Q14004 1512 aaKnown RBP18.13■□□□□ 0.49
SYNC-203ENST00000417633 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
SYNC-203ENST00000417633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
SYNC-203ENST00000417633 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
SYNC-203ENST00000417633 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
SYNC-203ENST00000417633 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
SYNC-203ENST00000417633 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
SYNC-203ENST00000417633 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
SYNC-203ENST00000417633 MAPKBP1O60336 1514 aa18.06■□□□□ 0.48
SYNC-203ENST00000417633 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
SYNC-203ENST00000417633 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
SYNC-203ENST00000417633 LRRC9Q6ZRR7 1453 aa18.05■□□□□ 0.48
SYNC-203ENST00000417633 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
SYNC-203ENST00000417633 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
SYNC-203ENST00000417633 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
SYNC-203ENST00000417633 WDR7Q9Y4E6 1490 aa18.02■□□□□ 0.48
SYNC-203ENST00000417633 EHBP1L1Q8N3D4 1523 aa18■□□□□ 0.47
SYNC-203ENST00000417633 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
SYNC-203ENST00000417633 ABCC10Q5T3U5 1492 aa17.94■□□□□ 0.46
SYNC-203ENST00000417633 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
SYNC-203ENST00000417633 KIF14Q15058 1648 aa17.93■□□□□ 0.46
SYNC-203ENST00000417633 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
SYNC-203ENST00000417633 GLI2P10070 1586 aa17.91■□□□□ 0.46
SYNC-203ENST00000417633 NCOA2Q15596 1464 aa17.91■□□□□ 0.46
SYNC-203ENST00000417633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.9■□□□□ 0.46
SYNC-203ENST00000417633 ABCA9Q8IUA7 1624 aa17.89■□□□□ 0.45
SYNC-203ENST00000417633 DIP2BQ9P265 1576 aa17.88■□□□□ 0.45
SYNC-203ENST00000417633 FAM69CQ0P6D2 419 aa17.88■□□□□ 0.45
SYNC-203ENST00000417633 CCNB3Q8WWL7 1395 aa17.86■□□□□ 0.45
SYNC-203ENST00000417633 TTC37Q6PGP7 1564 aa17.85■□□□□ 0.45
SYNC-203ENST00000417633 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
SYNC-203ENST00000417633 GPATCH8Q9UKJ3 1502 aaKnown RBP17.84■□□□□ 0.45
SYNC-203ENST00000417633 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
SYNC-203ENST00000417633 PLCH2O75038 1416 aa17.83■□□□□ 0.45
SYNC-203ENST00000417633 CD109Q6YHK3 1445 aa17.83■□□□□ 0.45
SYNC-203ENST00000417633 MYOM3Q5VTT5 1437 aa17.82■□□□□ 0.44
SYNC-203ENST00000417633 MAP3K4Q9Y6R4 1608 aa17.82■□□□□ 0.44
SYNC-203ENST00000417633 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
SYNC-203ENST00000417633 ARAP3Q8WWN8 1544 aa17.81■□□□□ 0.44
SYNC-203ENST00000417633 MYO5CQ9NQX4 1742 aa17.8■□□□□ 0.44
SYNC-203ENST00000417633 MIA2Q96PC5 1412 aa17.8■□□□□ 0.44
SYNC-203ENST00000417633 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
SYNC-203ENST00000417633 PREX2Q70Z35 1606 aa17.79■□□□□ 0.44
SYNC-203ENST00000417633 CDC42BPBQ9Y5S2 1711 aa17.78■□□□□ 0.44
SYNC-203ENST00000417633 ITSN2Q9NZM3 1697 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms