RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 CUL7Q14999 1698 aa13.33□□□□□ -0.28
MDC1-203ENST00000417033 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
MDC1-203ENST00000417033 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
MDC1-203ENST00000417033 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
MDC1-203ENST00000417033 FBLN2P98095 1184 aa13.3□□□□□ -0.28
MDC1-203ENST00000417033 CHD1O14646 1710 aa13.3□□□□□ -0.28
MDC1-203ENST00000417033 KIF21BO75037 1637 aa13.29□□□□□ -0.28
MDC1-203ENST00000417033 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
MDC1-203ENST00000417033 CHMP7Q8WUX9 453 aaPredicted RBP13.27□□□□□ -0.29
MDC1-203ENST00000417033 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
MDC1-203ENST00000417033 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
MDC1-203ENST00000417033 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
MDC1-203ENST00000417033 NUP160Q12769 1436 aa13.22□□□□□ -0.29
MDC1-203ENST00000417033 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
MDC1-203ENST00000417033 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
MDC1-203ENST00000417033 CLASP1Q7Z460 1538 aa13.16□□□□□ -0.3
MDC1-203ENST00000417033 KIAA0586Q9BVV6 1533 aa13.14□□□□□ -0.31
MDC1-203ENST00000417033 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
MDC1-203ENST00000417033 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
MDC1-203ENST00000417033 RANGAP1P46060 587 aaPredicted RBP13.13□□□□□ -0.31
MDC1-203ENST00000417033 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
MDC1-203ENST00000417033 IQGAP2Q13576 1575 aa13.12□□□□□ -0.31
MDC1-203ENST00000417033 TNIKQ9UKE5 1360 aa13.12□□□□□ -0.31
MDC1-203ENST00000417033 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
MDC1-203ENST00000417033 SHROOM2Q13796 1616 aa13.07□□□□□ -0.32
MDC1-203ENST00000417033 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
MDC1-203ENST00000417033 UGGT2Q9NYU1 1516 aa13.06□□□□□ -0.32
MDC1-203ENST00000417033 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
MDC1-203ENST00000417033 PRG4Q92954 1404 aaPredicted RBP13.05□□□□□ -0.32
MDC1-203ENST00000417033 DISP1Q96F81 1524 aa13.04□□□□□ -0.32
MDC1-203ENST00000417033 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
MDC1-203ENST00000417033 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
MDC1-203ENST00000417033 P3H3Q8IVL6 736 aa13.03□□□□□ -0.32
MDC1-203ENST00000417033 CLIP1P30622 1438 aa13.03□□□□□ -0.32
MDC1-203ENST00000417033 SAMD9Q5K651 1589 aa13.02□□□□□ -0.33
MDC1-203ENST00000417033 KIAA0556O60303 1618 aa13.02□□□□□ -0.33
MDC1-203ENST00000417033 FHOD3Q2V2M9 1422 aa13.01□□□□□ -0.33
MDC1-203ENST00000417033 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
MDC1-203ENST00000417033 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
MDC1-203ENST00000417033 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
MDC1-203ENST00000417033 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
MDC1-203ENST00000417033 EFCAB5A4FU69 1503 aa12.98□□□□□ -0.33
MDC1-203ENST00000417033 CARMIL2Q6F5E8 1435 aa12.96□□□□□ -0.34
MDC1-203ENST00000417033 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
MDC1-203ENST00000417033 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
MDC1-203ENST00000417033 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
MDC1-203ENST00000417033 PTPRGP23470 1445 aa12.9□□□□□ -0.34
MDC1-203ENST00000417033 PLB1Q6P1J6 1458 aa12.89□□□□□ -0.35
MDC1-203ENST00000417033 PCF11O94913 1555 aaKnown RBP12.87□□□□□ -0.35
MDC1-203ENST00000417033 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
MDC1-203ENST00000417033 VPS8Q8N3P4 1428 aa12.86□□□□□ -0.35
MDC1-203ENST00000417033 ABCA8O94911 1581 aa12.86□□□□□ -0.35
MDC1-203ENST00000417033 ARID3CA6NKF2 412 aa12.84□□□□□ -0.35
MDC1-203ENST00000417033 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
MDC1-203ENST00000417033 FMN1Q68DA7 1419 aa12.84□□□□□ -0.35
MDC1-203ENST00000417033 UACAQ9BZF9 1416 aa12.83□□□□□ -0.36
MDC1-203ENST00000417033 RAPGEF6Q8TEU7 1601 aa12.83□□□□□ -0.36
MDC1-203ENST00000417033 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
MDC1-203ENST00000417033 ADCY10Q96PN6 1610 aa12.81□□□□□ -0.36
MDC1-203ENST00000417033 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
MDC1-203ENST00000417033 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
MDC1-203ENST00000417033 ABCC2Q92887 1545 aa12.81□□□□□ -0.36
MDC1-203ENST00000417033 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
MDC1-203ENST00000417033 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
MDC1-203ENST00000417033 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
MDC1-203ENST00000417033 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
MDC1-203ENST00000417033 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
MDC1-203ENST00000417033 HECW1Q76N89 1606 aa12.78□□□□□ -0.36
MDC1-203ENST00000417033 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
MDC1-203ENST00000417033 ATP10BO94823 1461 aa12.75□□□□□ -0.37
MDC1-203ENST00000417033 EPRSP07814 1512 aaKnown RBP12.75□□□□□ -0.37
MDC1-203ENST00000417033 KDM5BQ9UGL1 1544 aa12.73□□□□□ -0.37
MDC1-203ENST00000417033 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
MDC1-203ENST00000417033 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
MDC1-203ENST00000417033 TIAM1Q13009 1591 aa12.71□□□□□ -0.37
MDC1-203ENST00000417033 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
MDC1-203ENST00000417033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
MDC1-203ENST00000417033 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
MDC1-203ENST00000417033 KANK4Q5T7N3 995 aaPredicted RBP12.69□□□□□ -0.38
MDC1-203ENST00000417033 PPARGC1BQ86YN6 1023 aaKnown RBP12.69□□□□□ -0.38
MDC1-203ENST00000417033 CCDC18Q5T9S5 1454 aa12.69□□□□□ -0.38
MDC1-203ENST00000417033 ASXL2Q76L83 1435 aa12.66□□□□□ -0.38
MDC1-203ENST00000417033 MAP3K1Q13233 1512 aa12.65□□□□□ -0.38
MDC1-203ENST00000417033 LRRC9Q6ZRR7 1453 aa12.65□□□□□ -0.38
MDC1-203ENST00000417033 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
MDC1-203ENST00000417033 TROQ12816 1431 aaPredicted RBP12.63□□□□□ -0.39
MDC1-203ENST00000417033 APLP2Q06481 763 aa12.63□□□□□ -0.39
MDC1-203ENST00000417033 WDR7Q9Y4E6 1490 aa12.63□□□□□ -0.39
MDC1-203ENST00000417033 MAPKBP1O60336 1514 aa12.62□□□□□ -0.39
MDC1-203ENST00000417033 KIF14Q15058 1648 aa12.62□□□□□ -0.39
MDC1-203ENST00000417033 MTUS2Q5JR59 1369 aa12.62□□□□□ -0.39
MDC1-203ENST00000417033 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
MDC1-203ENST00000417033 PLEKHD1A6NEE1 506 aa12.61□□□□□ -0.39
MDC1-203ENST00000417033 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
MDC1-203ENST00000417033 CDK11AQ9UQ88 783 aaPredicted RBP12.58□□□□□ -0.4
MDC1-203ENST00000417033 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
MDC1-203ENST00000417033 NCOA2Q15596 1464 aa12.57□□□□□ -0.4
MDC1-203ENST00000417033 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
MDC1-203ENST00000417033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.56□□□□□ -0.4
MDC1-203ENST00000417033 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms