RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
ITGA6-205ENST00000416789 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
ITGA6-205ENST00000416789 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
ITGA6-205ENST00000416789 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
ITGA6-205ENST00000416789 CUL7Q14999 1698 aa14.52□□□□□ -0.08
ITGA6-205ENST00000416789 ADAMTS12P58397 1594 aa14.52□□□□□ -0.08
ITGA6-205ENST00000416789 FHAD1B1AJZ9 1412 aa14.5□□□□□ -0.09
ITGA6-205ENST00000416789 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
ITGA6-205ENST00000416789 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
ITGA6-205ENST00000416789 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
ITGA6-205ENST00000416789 CACNB1Q02641 598 aaPredicted RBP14.46□□□□□ -0.09
ITGA6-205ENST00000416789 GRIN2AQ12879 1464 aa14.45□□□□□ -0.1
ITGA6-205ENST00000416789 FBLN2P98095 1184 aa14.45□□□□□ -0.1
ITGA6-205ENST00000416789 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
ITGA6-205ENST00000416789 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
ITGA6-205ENST00000416789 IGF1RP08069 1367 aa14.42□□□□□ -0.1
ITGA6-205ENST00000416789 NUP160Q12769 1436 aa14.4□□□□□ -0.1
ITGA6-205ENST00000416789 EEA1Q15075 1411 aa14.4□□□□□ -0.1
ITGA6-205ENST00000416789 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
ITGA6-205ENST00000416789 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
ITGA6-205ENST00000416789 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
ITGA6-205ENST00000416789 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
ITGA6-205ENST00000416789 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
ITGA6-205ENST00000416789 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
ITGA6-205ENST00000416789 ARHGEF11O15085 1522 aa14.34□□□□□ -0.11
ITGA6-205ENST00000416789 SHROOM2Q13796 1616 aa14.33□□□□□ -0.11
ITGA6-205ENST00000416789 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
ITGA6-205ENST00000416789 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
ITGA6-205ENST00000416789 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
ITGA6-205ENST00000416789 KIAA0586Q9BVV6 1533 aa14.3□□□□□ -0.12
ITGA6-205ENST00000416789 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
ITGA6-205ENST00000416789 CTTNBP2Q8WZ74 1663 aa14.25□□□□□ -0.13
ITGA6-205ENST00000416789 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
ITGA6-205ENST00000416789 IQGAP2Q13576 1575 aa14.22□□□□□ -0.13
ITGA6-205ENST00000416789 JPH4Q96JJ6 628 aa14.22□□□□□ -0.13
ITGA6-205ENST00000416789 KIF21BO75037 1637 aa14.19□□□□□ -0.14
ITGA6-205ENST00000416789 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
ITGA6-205ENST00000416789 CARMIL2Q6F5E8 1435 aa14.17□□□□□ -0.14
ITGA6-205ENST00000416789 PRG4Q92954 1404 aaPredicted RBP14.17□□□□□ -0.14
ITGA6-205ENST00000416789 UGGT2Q9NYU1 1516 aa14.15□□□□□ -0.14
ITGA6-205ENST00000416789 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
ITGA6-205ENST00000416789 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
ITGA6-205ENST00000416789 ERCC6L2Q5T890 1561 aa14.11□□□□□ -0.15
ITGA6-205ENST00000416789 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
ITGA6-205ENST00000416789 KIAA0556O60303 1618 aa14.08□□□□□ -0.16
ITGA6-205ENST00000416789 TNIKQ9UKE5 1360 aa14.08□□□□□ -0.16
ITGA6-205ENST00000416789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
ITGA6-205ENST00000416789 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
ITGA6-205ENST00000416789 FAM9AQ8IZU1 332 aaPredicted RBP14.06□□□□□ -0.16
ITGA6-205ENST00000416789 DISP1Q96F81 1524 aa14.05□□□□□ -0.16
ITGA6-205ENST00000416789 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
ITGA6-205ENST00000416789 PTPRGP23470 1445 aa14.03□□□□□ -0.16
ITGA6-205ENST00000416789 SAMD9Q5K651 1589 aa14.02□□□□□ -0.16
ITGA6-205ENST00000416789 EFCAB5A4FU69 1503 aa14.02□□□□□ -0.16
ITGA6-205ENST00000416789 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
ITGA6-205ENST00000416789 UHRF1BP1LA0JNW5 1464 aa14□□□□□ -0.17
ITGA6-205ENST00000416789 APLP2Q06481 763 aa14□□□□□ -0.17
ITGA6-205ENST00000416789 CAPN15O75808 1086 aa13.99□□□□□ -0.17
ITGA6-205ENST00000416789 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
ITGA6-205ENST00000416789 ADCY10Q96PN6 1610 aa13.97□□□□□ -0.17
ITGA6-205ENST00000416789 ZBTB22O15209 634 aa13.97□□□□□ -0.17
ITGA6-205ENST00000416789 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
ITGA6-205ENST00000416789 UACAQ9BZF9 1416 aa13.97□□□□□ -0.17
ITGA6-205ENST00000416789 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
ITGA6-205ENST00000416789 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
ITGA6-205ENST00000416789 UBTFP17480 764 aaKnown RBP13.95□□□□□ -0.18
ITGA6-205ENST00000416789 ABCA8O94911 1581 aa13.92□□□□□ -0.18
ITGA6-205ENST00000416789 KDM5BQ9UGL1 1544 aa13.9□□□□□ -0.18
ITGA6-205ENST00000416789 RAPGEF6Q8TEU7 1601 aa13.87□□□□□ -0.19
ITGA6-205ENST00000416789 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
ITGA6-205ENST00000416789 ZCCHC11Q5TAX3 1644 aaKnown RBP13.86□□□□□ -0.19
ITGA6-205ENST00000416789 KIF13AQ9H1H9 1805 aa13.86□□□□□ -0.19
ITGA6-205ENST00000416789 FMN1Q68DA7 1419 aa13.86□□□□□ -0.19
ITGA6-205ENST00000416789 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
ITGA6-205ENST00000416789 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
ITGA6-205ENST00000416789 ABCC10Q5T3U5 1492 aa13.83□□□□□ -0.2
ITGA6-205ENST00000416789 ARHGAP35Q9NRY4 1499 aa13.82□□□□□ -0.2
ITGA6-205ENST00000416789 GLI2P10070 1586 aa13.82□□□□□ -0.2
ITGA6-205ENST00000416789 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
ITGA6-205ENST00000416789 DIP2BQ9P265 1576 aa13.81□□□□□ -0.2
ITGA6-205ENST00000416789 TTBK1Q5TCY1 1321 aaPredicted RBP13.81□□□□□ -0.2
ITGA6-205ENST00000416789 DSG3P32926 999 aa13.8□□□□□ -0.2
ITGA6-205ENST00000416789 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
ITGA6-205ENST00000416789 ASXL2Q76L83 1435 aa13.79□□□□□ -0.2
ITGA6-205ENST00000416789 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
ITGA6-205ENST00000416789 CLIP1P30622 1438 aa13.77□□□□□ -0.21
ITGA6-205ENST00000416789 WDR7Q9Y4E6 1490 aa13.77□□□□□ -0.21
ITGA6-205ENST00000416789 ATP10BO94823 1461 aa13.75□□□□□ -0.21
ITGA6-205ENST00000416789 NUP153P49790 1475 aaKnown RBP13.75□□□□□ -0.21
ITGA6-205ENST00000416789 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
ITGA6-205ENST00000416789 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
ITGA6-205ENST00000416789 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
ITGA6-205ENST00000416789 FAM69CQ0P6D2 419 aa13.73□□□□□ -0.21
ITGA6-205ENST00000416789 MAP3K4Q9Y6R4 1608 aa13.72□□□□□ -0.21
ITGA6-205ENST00000416789 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
ITGA6-205ENST00000416789 CASKIN1Q8WXD9 1431 aa13.72□□□□□ -0.21
ITGA6-205ENST00000416789 FYCO1Q9BQS8 1478 aa13.71□□□□□ -0.21
ITGA6-205ENST00000416789 CEP162Q5TB80 1403 aa13.71□□□□□ -0.22
ITGA6-205ENST00000416789 CDK11AQ9UQ88 783 aaPredicted RBP13.7□□□□□ -0.22
ITGA6-205ENST00000416789 TEX14Q8IWB6 1497 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms