RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 FAM50AQ14320 339 aaKnown RBP14.69□□□□□ -0.06
LINC00494-201ENST00000416742 DHX57Q6P158 1386 aaKnown RBP14.67□□□□□ -0.06
LINC00494-201ENST00000416742 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
LINC00494-201ENST00000416742 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
LINC00494-201ENST00000416742 LRRC9Q6ZRR7 1453 aa14.65□□□□□ -0.06
LINC00494-201ENST00000416742 CUL7Q14999 1698 aa14.64□□□□□ -0.07
LINC00494-201ENST00000416742 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
LINC00494-201ENST00000416742 PHLDB1Q86UU1 1377 aa14.62□□□□□ -0.07
LINC00494-201ENST00000416742 PCF11O94913 1555 aaKnown RBP14.62□□□□□ -0.07
LINC00494-201ENST00000416742 MAP3K1Q13233 1512 aa14.61□□□□□ -0.07
LINC00494-201ENST00000416742 CLSPNQ9HAW4 1339 aa14.61□□□□□ -0.07
LINC00494-201ENST00000416742 EFCAB5A4FU69 1503 aa14.58□□□□□ -0.08
LINC00494-201ENST00000416742 WDR97A6NE52 1622 aa14.58□□□□□ -0.08
LINC00494-201ENST00000416742 RAB3GAP2Q9H2M9 1393 aa14.57□□□□□ -0.08
LINC00494-201ENST00000416742 CASKIN1Q8WXD9 1431 aa14.57□□□□□ -0.08
LINC00494-201ENST00000416742 CTTNBP2Q8WZ74 1663 aa14.57□□□□□ -0.08
LINC00494-201ENST00000416742 ABCA5Q8WWZ7 1642 aa14.57□□□□□ -0.08
LINC00494-201ENST00000416742 FMN1Q68DA7 1419 aa14.56□□□□□ -0.08
LINC00494-201ENST00000416742 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
LINC00494-201ENST00000416742 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.08
LINC00494-201ENST00000416742 FYCO1Q9BQS8 1478 aa14.55□□□□□ -0.08
LINC00494-201ENST00000416742 NEUROD1Q13562 356 aa14.54□□□□□ -0.08
LINC00494-201ENST00000416742 MTUS2Q5JR59 1369 aa14.54□□□□□ -0.08
LINC00494-201ENST00000416742 MIER1Q8N108 512 aa14.53□□□□□ -0.08
LINC00494-201ENST00000416742 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
LINC00494-201ENST00000416742 YTHDC1Q96MU7 727 aaKnown RBP14.53□□□□□ -0.08
LINC00494-201ENST00000416742 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
LINC00494-201ENST00000416742 SETD5Q9C0A6 1442 aa14.52□□□□□ -0.08
LINC00494-201ENST00000416742 CFAP43Q8NDM7 1665 aa14.52□□□□□ -0.09
LINC00494-201ENST00000416742 TARBP1Q13395 1621 aaKnown RBP14.51□□□□□ -0.09
LINC00494-201ENST00000416742 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
LINC00494-201ENST00000416742 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
LINC00494-201ENST00000416742 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
LINC00494-201ENST00000416742 SIN3AQ96ST3 1273 aa14.46□□□□□ -0.1
LINC00494-201ENST00000416742 SAMD9Q5K651 1589 aa14.44□□□□□ -0.1
LINC00494-201ENST00000416742 ZNF608Q9ULD9 1512 aaPredicted RBP14.43□□□□□ -0.1
LINC00494-201ENST00000416742 FGD6Q6ZV73 1430 aa14.43□□□□□ -0.1
LINC00494-201ENST00000416742 GRIN2BQ13224 1484 aa14.43□□□□□ -0.1
LINC00494-201ENST00000416742 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
LINC00494-201ENST00000416742 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
LINC00494-201ENST00000416742 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
LINC00494-201ENST00000416742 MAPKBP1O60336 1514 aa14.39□□□□□ -0.11
LINC00494-201ENST00000416742 FBLN2P98095 1184 aa14.39□□□□□ -0.11
LINC00494-201ENST00000416742 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
LINC00494-201ENST00000416742 GTF3C3Q9Y5Q9 886 aa14.39□□□□□ -0.11
LINC00494-201ENST00000416742 ADAMTS12P58397 1594 aa14.38□□□□□ -0.11
LINC00494-201ENST00000416742 IQGAP2Q13576 1575 aa14.38□□□□□ -0.11
LINC00494-201ENST00000416742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC00494-201ENST00000416742 CHIC2Q9UKJ5 165 aa14.37□□□□□ -0.11
LINC00494-201ENST00000416742 MYOM3Q5VTT5 1437 aa14.36□□□□□ -0.11
LINC00494-201ENST00000416742 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
LINC00494-201ENST00000416742 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
LINC00494-201ENST00000416742 PTPRKQ15262 1439 aa14.34□□□□□ -0.11
LINC00494-201ENST00000416742 RRP7BPQ9NSQ0 103 aa14.33□□□□□ -0.11
LINC00494-201ENST00000416742 WDR62O43379 1518 aa14.33□□□□□ -0.12
LINC00494-201ENST00000416742 EHBP1L1Q8N3D4 1523 aa14.33□□□□□ -0.12
LINC00494-201ENST00000416742 SUPT6HQ7KZ85 1726 aaKnown RBP14.32□□□□□ -0.12
LINC00494-201ENST00000416742 CCDC18Q5T9S5 1454 aa14.31□□□□□ -0.12
LINC00494-201ENST00000416742 MAGI3Q5TCQ9 1506 aa14.31□□□□□ -0.12
LINC00494-201ENST00000416742 THOC2Q8NI27 1593 aaKnown RBP14.31□□□□□ -0.12
LINC00494-201ENST00000416742 CDK13Q14004 1512 aaKnown RBP14.31□□□□□ -0.12
LINC00494-201ENST00000416742 EPRSP07814 1512 aaKnown RBP14.3□□□□□ -0.12
LINC00494-201ENST00000416742 HECW1Q76N89 1606 aa14.29□□□□□ -0.12
LINC00494-201ENST00000416742 KIAA0586Q9BVV6 1533 aa14.28□□□□□ -0.12
LINC00494-201ENST00000416742 TRIM52Q96A61 297 aa14.28□□□□□ -0.12
LINC00494-201ENST00000416742 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
LINC00494-201ENST00000416742 UGGT2Q9NYU1 1516 aa14.27□□□□□ -0.12
LINC00494-201ENST00000416742 HFM1A2PYH4 1435 aa14.27□□□□□ -0.13
LINC00494-201ENST00000416742 GRIN2AQ12879 1464 aa14.26□□□□□ -0.13
LINC00494-201ENST00000416742 NAIPQ13075 1403 aa14.26□□□□□ -0.13
LINC00494-201ENST00000416742 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
LINC00494-201ENST00000416742 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
LINC00494-201ENST00000416742 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
LINC00494-201ENST00000416742 TIMELESSQ9UNS1 1208 aa14.25□□□□□ -0.13
LINC00494-201ENST00000416742 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
LINC00494-201ENST00000416742 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
LINC00494-201ENST00000416742 CDK11AQ9UQ88 783 aaPredicted RBP14.24□□□□□ -0.13
LINC00494-201ENST00000416742 UACAQ9BZF9 1416 aa14.23□□□□□ -0.13
LINC00494-201ENST00000416742 DISP1Q96F81 1524 aa14.23□□□□□ -0.13
LINC00494-201ENST00000416742 ARHGEF11O15085 1522 aa14.21□□□□□ -0.13
LINC00494-201ENST00000416742 JPH4Q96JJ6 628 aa14.21□□□□□ -0.14
LINC00494-201ENST00000416742 KIAA0556O60303 1618 aa14.2□□□□□ -0.14
LINC00494-201ENST00000416742 ZNF644Q9H582 1327 aaPredicted RBP14.19□□□□□ -0.14
LINC00494-201ENST00000416742 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
LINC00494-201ENST00000416742 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
LINC00494-201ENST00000416742 ZNF777Q9ULD5 760 aaPredicted RBP14.18□□□□□ -0.14
LINC00494-201ENST00000416742 NUP153P49790 1475 aaKnown RBP14.18□□□□□ -0.14
LINC00494-201ENST00000416742 MIA2Q96PC5 1412 aa14.17□□□□□ -0.14
LINC00494-201ENST00000416742 TCOF1Q13428 1488 aaKnown RBP14.17□□□□□ -0.14
LINC00494-201ENST00000416742 FOXD1Q16676 465 aa14.15□□□□□ -0.14
LINC00494-201ENST00000416742 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
LINC00494-201ENST00000416742 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
LINC00494-201ENST00000416742 CEP170Q5SW79 1584 aa14.14□□□□□ -0.15
LINC00494-201ENST00000416742 CARMIL2Q6F5E8 1435 aa14.14□□□□□ -0.15
LINC00494-201ENST00000416742 RAPGEF6Q8TEU7 1601 aa14.14□□□□□ -0.15
LINC00494-201ENST00000416742 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
LINC00494-201ENST00000416742 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
LINC00494-201ENST00000416742 MPHOSPH9Q99550 1183 aa14.14□□□□□ -0.15
LINC00494-201ENST00000416742 KDM6BO15054 1643 aa14.1□□□□□ -0.15
LINC00494-201ENST00000416742 PLEKHD1A6NEE1 506 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms