RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
DEPDC4-203ENST00000416321 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
DEPDC4-203ENST00000416321 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
DEPDC4-203ENST00000416321 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
DEPDC4-203ENST00000416321 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
DEPDC4-203ENST00000416321 CTTNBP2Q8WZ74 1663 aa16.14■□□□□ 0.18
DEPDC4-203ENST00000416321 CLIP1P30622 1438 aa16.14■□□□□ 0.17
DEPDC4-203ENST00000416321 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
DEPDC4-203ENST00000416321 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
DEPDC4-203ENST00000416321 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
DEPDC4-203ENST00000416321 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
DEPDC4-203ENST00000416321 FBLN2P98095 1184 aa16.11■□□□□ 0.17
DEPDC4-203ENST00000416321 IQGAP2Q13576 1575 aa16.03■□□□□ 0.16
DEPDC4-203ENST00000416321 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.15
DEPDC4-203ENST00000416321 CHD1O14646 1710 aa16.01■□□□□ 0.15
DEPDC4-203ENST00000416321 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
DEPDC4-203ENST00000416321 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
DEPDC4-203ENST00000416321 NUP160Q12769 1436 aa15.98■□□□□ 0.15
DEPDC4-203ENST00000416321 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
DEPDC4-203ENST00000416321 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
DEPDC4-203ENST00000416321 ARAP1Q96P48 1450 aa15.96■□□□□ 0.14
DEPDC4-203ENST00000416321 SAMD9Q5K651 1589 aa15.93■□□□□ 0.14
DEPDC4-203ENST00000416321 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
DEPDC4-203ENST00000416321 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
DEPDC4-203ENST00000416321 APLP2Q06481 763 aa15.91■□□□□ 0.14
DEPDC4-203ENST00000416321 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
DEPDC4-203ENST00000416321 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
DEPDC4-203ENST00000416321 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
DEPDC4-203ENST00000416321 JPH4Q96JJ6 628 aa15.86■□□□□ 0.13
DEPDC4-203ENST00000416321 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
DEPDC4-203ENST00000416321 DISP1Q96F81 1524 aa15.82■□□□□ 0.12
DEPDC4-203ENST00000416321 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
DEPDC4-203ENST00000416321 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
DEPDC4-203ENST00000416321 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
DEPDC4-203ENST00000416321 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
DEPDC4-203ENST00000416321 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
DEPDC4-203ENST00000416321 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
DEPDC4-203ENST00000416321 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
DEPDC4-203ENST00000416321 TTBK1Q5TCY1 1321 aaPredicted RBP15.77■□□□□ 0.12
DEPDC4-203ENST00000416321 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
DEPDC4-203ENST00000416321 PPARGC1BQ86YN6 1023 aaKnown RBP15.76■□□□□ 0.11
DEPDC4-203ENST00000416321 HECW1Q76N89 1606 aa15.73■□□□□ 0.11
DEPDC4-203ENST00000416321 MAP3K1Q13233 1512 aa15.72■□□□□ 0.11
DEPDC4-203ENST00000416321 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
DEPDC4-203ENST00000416321 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
DEPDC4-203ENST00000416321 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
DEPDC4-203ENST00000416321 CCDC18Q5T9S5 1454 aa15.69■□□□□ 0.1
DEPDC4-203ENST00000416321 PTPRGP23470 1445 aa15.68■□□□□ 0.1
DEPDC4-203ENST00000416321 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
DEPDC4-203ENST00000416321 ERCC6L2Q5T890 1561 aa15.64■□□□□ 0.09
DEPDC4-203ENST00000416321 PLB1Q6P1J6 1458 aa15.63■□□□□ 0.09
DEPDC4-203ENST00000416321 EPRSP07814 1512 aaKnown RBP15.63■□□□□ 0.09
DEPDC4-203ENST00000416321 KANK4Q5T7N3 995 aaPredicted RBP15.62■□□□□ 0.09
DEPDC4-203ENST00000416321 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
DEPDC4-203ENST00000416321 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
DEPDC4-203ENST00000416321 ABCA8O94911 1581 aa15.62■□□□□ 0.09
DEPDC4-203ENST00000416321 LRRIQ1Q96JM4 1722 aa15.61■□□□□ 0.09
DEPDC4-203ENST00000416321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
DEPDC4-203ENST00000416321 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
DEPDC4-203ENST00000416321 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
DEPDC4-203ENST00000416321 NUP153P49790 1475 aaKnown RBP15.6■□□□□ 0.09
DEPDC4-203ENST00000416321 ARID3CA6NKF2 412 aa15.6■□□□□ 0.09
DEPDC4-203ENST00000416321 PCGF6Q9BYE7 350 aa15.59■□□□□ 0.09
DEPDC4-203ENST00000416321 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
DEPDC4-203ENST00000416321 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.09
DEPDC4-203ENST00000416321 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
DEPDC4-203ENST00000416321 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
DEPDC4-203ENST00000416321 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
DEPDC4-203ENST00000416321 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
DEPDC4-203ENST00000416321 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
DEPDC4-203ENST00000416321 SUPT6HQ7KZ85 1726 aaKnown RBP15.53■□□□□ 0.08
DEPDC4-203ENST00000416321 UHRF1BP1LA0JNW5 1464 aa15.51■□□□□ 0.07
DEPDC4-203ENST00000416321 ATP10BO94823 1461 aa15.49■□□□□ 0.07
DEPDC4-203ENST00000416321 PLEKHD1A6NEE1 506 aa15.49■□□□□ 0.07
DEPDC4-203ENST00000416321 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
DEPDC4-203ENST00000416321 MAGI3Q5TCQ9 1506 aa15.48■□□□□ 0.07
DEPDC4-203ENST00000416321 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
DEPDC4-203ENST00000416321 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
DEPDC4-203ENST00000416321 PHLDB1Q86UU1 1377 aa15.44■□□□□ 0.06
DEPDC4-203ENST00000416321 RRBP1Q9P2E9 1410 aaKnown RBP15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 KIF14Q15058 1648 aa15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 KDM5BQ9UGL1 1544 aa15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
DEPDC4-203ENST00000416321 RIMBP3CA6NJZ7 1639 aa15.42■□□□□ 0.06
DEPDC4-203ENST00000416321 RIMBP3BA6NNM3 1639 aa15.42■□□□□ 0.06
DEPDC4-203ENST00000416321 RIMBP3Q9UFD9 1639 aa15.42■□□□□ 0.06
DEPDC4-203ENST00000416321 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
DEPDC4-203ENST00000416321 FGD6Q6ZV73 1430 aa15.39■□□□□ 0.05
DEPDC4-203ENST00000416321 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
DEPDC4-203ENST00000416321 DMRT2Q9Y5R5 561 aa15.37■□□□□ 0.05
DEPDC4-203ENST00000416321 ITSN2Q9NZM3 1697 aa15.37■□□□□ 0.05
DEPDC4-203ENST00000416321 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
DEPDC4-203ENST00000416321 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
DEPDC4-203ENST00000416321 PTPN23Q9H3S7 1636 aa15.33■□□□□ 0.04
DEPDC4-203ENST00000416321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.04
DEPDC4-203ENST00000416321 ITGAEP38570 1179 aa15.32■□□□□ 0.04
DEPDC4-203ENST00000416321 WDR7Q9Y4E6 1490 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms