RNA–Protein interactions for RNA: ENST00000416277.5

VWA3B-202, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,827 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-202ENST00000416277 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
VWA3B-202ENST00000416277 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
VWA3B-202ENST00000416277 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
VWA3B-202ENST00000416277 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
VWA3B-202ENST00000416277 PCF11O94913 1555 aaKnown RBP19.96■□□□□ 0.79
VWA3B-202ENST00000416277 ABCA10Q8WWZ4 1543 aa19.95■□□□□ 0.78
VWA3B-202ENST00000416277 CUL7Q14999 1698 aa19.92■□□□□ 0.78
VWA3B-202ENST00000416277 EFCAB5A4FU69 1503 aa19.92■□□□□ 0.78
VWA3B-202ENST00000416277 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
VWA3B-202ENST00000416277 MAPKBP1O60336 1514 aa19.91■□□□□ 0.78
VWA3B-202ENST00000416277 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
VWA3B-202ENST00000416277 CTTNBP2Q8WZ74 1663 aa19.89■□□□□ 0.78
VWA3B-202ENST00000416277 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.78
VWA3B-202ENST00000416277 PHLDB1Q86UU1 1377 aa19.88■□□□□ 0.77
VWA3B-202ENST00000416277 FYCO1Q9BQS8 1478 aa19.87■□□□□ 0.77
VWA3B-202ENST00000416277 SETD5Q9C0A6 1442 aa19.87■□□□□ 0.77
VWA3B-202ENST00000416277 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
VWA3B-202ENST00000416277 ITGAEP38570 1179 aa19.86■□□□□ 0.77
VWA3B-202ENST00000416277 ANP32EQ9BTT0 268 aa19.86■□□□□ 0.77
VWA3B-202ENST00000416277 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.77
VWA3B-202ENST00000416277 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
VWA3B-202ENST00000416277 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
VWA3B-202ENST00000416277 FHOD3Q2V2M9 1422 aa19.81■□□□□ 0.76
VWA3B-202ENST00000416277 NESP48681 1621 aa19.78■□□□□ 0.76
VWA3B-202ENST00000416277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.76
VWA3B-202ENST00000416277 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
VWA3B-202ENST00000416277 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
VWA3B-202ENST00000416277 ABCA5Q8WWZ7 1642 aa19.74■□□□□ 0.75
VWA3B-202ENST00000416277 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
VWA3B-202ENST00000416277 FAM50AQ14320 339 aaKnown RBP19.73■□□□□ 0.75
VWA3B-202ENST00000416277 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
VWA3B-202ENST00000416277 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
VWA3B-202ENST00000416277 SAMD9Q5K651 1589 aa19.71■□□□□ 0.75
VWA3B-202ENST00000416277 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
VWA3B-202ENST00000416277 TIMELESSQ9UNS1 1208 aa19.66■□□□□ 0.74
VWA3B-202ENST00000416277 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
VWA3B-202ENST00000416277 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
VWA3B-202ENST00000416277 LRRIQ1Q96JM4 1722 aa19.66■□□□□ 0.74
VWA3B-202ENST00000416277 KIF21AQ7Z4S6 1674 aa19.63■□□□□ 0.73
VWA3B-202ENST00000416277 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
VWA3B-202ENST00000416277 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
VWA3B-202ENST00000416277 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
VWA3B-202ENST00000416277 MTUS2Q5JR59 1369 aa19.58■□□□□ 0.72
VWA3B-202ENST00000416277 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
VWA3B-202ENST00000416277 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
VWA3B-202ENST00000416277 CCDC18Q5T9S5 1454 aa19.57■□□□□ 0.72
VWA3B-202ENST00000416277 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
VWA3B-202ENST00000416277 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
VWA3B-202ENST00000416277 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
VWA3B-202ENST00000416277 HFM1A2PYH4 1435 aa19.56■□□□□ 0.72
VWA3B-202ENST00000416277 NCOA2Q15596 1464 aa19.55■□□□□ 0.72
VWA3B-202ENST00000416277 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
VWA3B-202ENST00000416277 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
VWA3B-202ENST00000416277 UACAQ9BZF9 1416 aa19.52■□□□□ 0.72
VWA3B-202ENST00000416277 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
VWA3B-202ENST00000416277 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
VWA3B-202ENST00000416277 SUPT16HQ9Y5B9 1047 aaKnown RBP19.5■□□□□ 0.71
VWA3B-202ENST00000416277 ARHGEF11O15085 1522 aa19.5■□□□□ 0.71
VWA3B-202ENST00000416277 UGGT2Q9NYU1 1516 aa19.5■□□□□ 0.71
VWA3B-202ENST00000416277 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
VWA3B-202ENST00000416277 NAIPQ13075 1403 aa19.47■□□□□ 0.71
VWA3B-202ENST00000416277 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
VWA3B-202ENST00000416277 DDX10Q13206 875 aaKnown RBP19.45■□□□□ 0.7
VWA3B-202ENST00000416277 MAGI3Q5TCQ9 1506 aa19.44■□□□□ 0.7
VWA3B-202ENST00000416277 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
VWA3B-202ENST00000416277 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
VWA3B-202ENST00000416277 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
VWA3B-202ENST00000416277 TCOF1Q13428 1488 aaKnown RBP19.42■□□□□ 0.7
VWA3B-202ENST00000416277 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
VWA3B-202ENST00000416277 ADAMTS12P58397 1594 aa19.41■□□□□ 0.7
VWA3B-202ENST00000416277 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
VWA3B-202ENST00000416277 KDM5BQ9UGL1 1544 aa19.37■□□□□ 0.69
VWA3B-202ENST00000416277 CCER2I3L3R5 266 aa19.36■□□□□ 0.69
VWA3B-202ENST00000416277 EPRSP07814 1512 aaKnown RBP19.35■□□□□ 0.69
VWA3B-202ENST00000416277 WDR62O43379 1518 aa19.34■□□□□ 0.69
VWA3B-202ENST00000416277 MIA2Q96PC5 1412 aa19.31■□□□□ 0.68
VWA3B-202ENST00000416277 HIRIP3Q9BW71 556 aaPredicted RBP19.31■□□□□ 0.68
VWA3B-202ENST00000416277 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
VWA3B-202ENST00000416277 ANP32CO43423 234 aa19.3■□□□□ 0.68
VWA3B-202ENST00000416277 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
VWA3B-202ENST00000416277 CDK13Q14004 1512 aaKnown RBP19.28■□□□□ 0.68
VWA3B-202ENST00000416277 DENND4BO75064 1496 aaPredicted RBP19.28■□□□□ 0.68
VWA3B-202ENST00000416277 KDM6BO15054 1643 aa19.26■□□□□ 0.67
VWA3B-202ENST00000416277 TSHZ2Q9NRE2 1034 aa19.25■□□□□ 0.67
VWA3B-202ENST00000416277 RRP7BPQ9NSQ0 103 aa19.23■□□□□ 0.67
VWA3B-202ENST00000416277 KIAA0556O60303 1618 aa19.21■□□□□ 0.67
VWA3B-202ENST00000416277 IFT140Q96RY7 1462 aa19.2■□□□□ 0.66
VWA3B-202ENST00000416277 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
VWA3B-202ENST00000416277 DNMT1P26358 1616 aaKnown RBP19.19■□□□□ 0.66
VWA3B-202ENST00000416277 CHIC2Q9UKJ5 165 aa19.18■□□□□ 0.66
VWA3B-202ENST00000416277 KIAA0586Q9BVV6 1533 aa19.18■□□□□ 0.66
VWA3B-202ENST00000416277 ROCK1Q13464 1354 aa19.17■□□□□ 0.66
VWA3B-202ENST00000416277 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
VWA3B-202ENST00000416277 DAPK1P53355 1430 aa19.15■□□□□ 0.66
VWA3B-202ENST00000416277 RAPGEF6Q8TEU7 1601 aa19.15■□□□□ 0.66
VWA3B-202ENST00000416277 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
VWA3B-202ENST00000416277 TRIM52Q96A61 297 aa19.14■□□□□ 0.65
VWA3B-202ENST00000416277 FKBP8Q14318 412 aa19.14■□□□□ 0.65
VWA3B-202ENST00000416277 NUP153P49790 1475 aaKnown RBP19.13■□□□□ 0.65
VWA3B-202ENST00000416277 MPHOSPH9Q99550 1183 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms