RNA–Protein interactions for RNA: ENST00000416195.1

SP3-202, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SP3, Length 3,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-202ENST00000416195 BCL11AQ9H165 835 aa16.83■□□□□ 0.28
SP3-202ENST00000416195 ERICH6Q7L0X2 663 aa16.82■□□□□ 0.28
SP3-202ENST00000416195 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
SP3-202ENST00000416195 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
SP3-202ENST00000416195 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
SP3-202ENST00000416195 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
SP3-202ENST00000416195 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
SP3-202ENST00000416195 CFTRP13569 1480 aa16.78■□□□□ 0.28
SP3-202ENST00000416195 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
SP3-202ENST00000416195 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
SP3-202ENST00000416195 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
SP3-202ENST00000416195 KCNH8Q96L42 1107 aa16.75■□□□□ 0.27
SP3-202ENST00000416195 PRKCSHP14314 528 aaPredicted RBP16.73■□□□□ 0.27
SP3-202ENST00000416195 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
SP3-202ENST00000416195 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
SP3-202ENST00000416195 FOXD1Q16676 465 aa16.72■□□□□ 0.27
SP3-202ENST00000416195 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
SP3-202ENST00000416195 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.27
SP3-202ENST00000416195 DHX57Q6P158 1386 aaKnown RBP16.71■□□□□ 0.27
SP3-202ENST00000416195 PHLDB1Q86UU1 1377 aa16.66■□□□□ 0.26
SP3-202ENST00000416195 CHMP7Q8WUX9 453 aaPredicted RBP16.63■□□□□ 0.25
SP3-202ENST00000416195 HMGXB3Q12766 1538 aa16.61■□□□□ 0.25
SP3-202ENST00000416195 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
SP3-202ENST00000416195 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.248e-9■■■■■ 48.6
SP3-202ENST00000416195 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
SP3-202ENST00000416195 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
SP3-202ENST00000416195 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.24
SP3-202ENST00000416195 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
SP3-202ENST00000416195 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
SP3-202ENST00000416195 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
SP3-202ENST00000416195 ANP32CO43423 234 aa16.5■□□□□ 0.23
SP3-202ENST00000416195 IRX6P78412 446 aaPredicted RBP16.49■□□□□ 0.23
SP3-202ENST00000416195 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
SP3-202ENST00000416195 ZNF644Q9H582 1327 aaPredicted RBP16.49■□□□□ 0.23
SP3-202ENST00000416195 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
SP3-202ENST00000416195 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
SP3-202ENST00000416195 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
SP3-202ENST00000416195 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
SP3-202ENST00000416195 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
SP3-202ENST00000416195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.227e-13■■□□□ 12.4
SP3-202ENST00000416195 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
SP3-202ENST00000416195 FKBP8Q14318 412 aa16.43■□□□□ 0.22
SP3-202ENST00000416195 NEFLP07196 543 aa16.43■□□□□ 0.22
SP3-202ENST00000416195 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
SP3-202ENST00000416195 FAM9BQ8IZU0 186 aa16.4■□□□□ 0.22
SP3-202ENST00000416195 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
SP3-202ENST00000416195 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
SP3-202ENST00000416195 RRBP1Q9P2E9 1410 aaKnown RBP16.39■□□□□ 0.21
SP3-202ENST00000416195 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
SP3-202ENST00000416195 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
SP3-202ENST00000416195 PPP1R15AO75807 674 aaPredicted RBP16.36■□□□□ 0.21
SP3-202ENST00000416195 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
SP3-202ENST00000416195 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
SP3-202ENST00000416195 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
SP3-202ENST00000416195 RGL3Q3MIN7 710 aa16.34■□□□□ 0.21
SP3-202ENST00000416195 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
SP3-202ENST00000416195 TIAM1Q13009 1591 aa16.32■□□□□ 0.2
SP3-202ENST00000416195 MPHOSPH9Q99550 1183 aa16.3■□□□□ 0.2
SP3-202ENST00000416195 L3MBTL2Q969R5 705 aa16.3■□□□□ 0.2
SP3-202ENST00000416195 FGD6Q6ZV73 1430 aa16.3■□□□□ 0.2
SP3-202ENST00000416195 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
SP3-202ENST00000416195 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
SP3-202ENST00000416195 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
SP3-202ENST00000416195 SUPT16HQ9Y5B9 1047 aaKnown RBP16.28■□□□□ 0.2
SP3-202ENST00000416195 PLEKHD1A6NEE1 506 aa16.27■□□□□ 0.2
SP3-202ENST00000416195 ABCA10Q8WWZ4 1543 aa16.27■□□□□ 0.2
SP3-202ENST00000416195 JPH4Q96JJ6 628 aa16.27■□□□□ 0.19
SP3-202ENST00000416195 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
SP3-202ENST00000416195 NCOA2Q15596 1464 aa16.25■□□□□ 0.19
SP3-202ENST00000416195 CCDC18Q5T9S5 1454 aa16.25■□□□□ 0.19
SP3-202ENST00000416195 HNRNPMP52272 730 aaKnown RBP eCLIP16.25■□□□□ 0.194e-7■■■■□ 25.7
SP3-202ENST00000416195 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
SP3-202ENST00000416195 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
SP3-202ENST00000416195 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
SP3-202ENST00000416195 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
SP3-202ENST00000416195 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
SP3-202ENST00000416195 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
SP3-202ENST00000416195 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
SP3-202ENST00000416195 PKD2Q13563 968 aa16.2■□□□□ 0.18
SP3-202ENST00000416195 ANP32EQ9BTT0 268 aa16.18■□□□□ 0.18
SP3-202ENST00000416195 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
SP3-202ENST00000416195 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
SP3-202ENST00000416195 PRDM2Q13029 1718 aa16.15■□□□□ 0.18
SP3-202ENST00000416195 MAPKBP1O60336 1514 aa16.14■□□□□ 0.17
SP3-202ENST00000416195 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
SP3-202ENST00000416195 CCDC184Q52MB2 194 aa16.13■□□□□ 0.17
SP3-202ENST00000416195 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
SP3-202ENST00000416195 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
SP3-202ENST00000416195 NBPF8Q3BBV2 869 aa16.1■□□□□ 0.17
SP3-202ENST00000416195 NAIPQ13075 1403 aa16.09■□□□□ 0.17
SP3-202ENST00000416195 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.17
SP3-202ENST00000416195 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.17
SP3-202ENST00000416195 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.16
SP3-202ENST00000416195 LAMC3Q9Y6N6 1575 aa16.08■□□□□ 0.16
SP3-202ENST00000416195 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
SP3-202ENST00000416195 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
SP3-202ENST00000416195 NUP155O75694 1391 aa16.07■□□□□ 0.16
SP3-202ENST00000416195 PLB1Q6P1J6 1458 aa16.07■□□□□ 0.16
SP3-202ENST00000416195 WASHC2AQ641Q2 1341 aa16.06■□□□□ 0.16
SP3-202ENST00000416195 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms