RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
SAPCD1-208ENST00000415669 CTTNBP2Q8WZ74 1663 aa23.83■■□□□ 1.41
SAPCD1-208ENST00000415669 SHROOM2Q13796 1616 aa23.83■■□□□ 1.41
SAPCD1-208ENST00000415669 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
SAPCD1-208ENST00000415669 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
SAPCD1-208ENST00000415669 KIF21BO75037 1637 aa23.77■■□□□ 1.4
SAPCD1-208ENST00000415669 IQGAP2Q13576 1575 aa23.76■■□□□ 1.39
SAPCD1-208ENST00000415669 ERCC6L2Q5T890 1561 aa23.71■■□□□ 1.39
SAPCD1-208ENST00000415669 ARAP1Q96P48 1450 aa23.66■■□□□ 1.38
SAPCD1-208ENST00000415669 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
SAPCD1-208ENST00000415669 JPH4Q96JJ6 628 aa23.64■■□□□ 1.37
SAPCD1-208ENST00000415669 GOLGA3Q08378 1498 aa23.6■■□□□ 1.37
SAPCD1-208ENST00000415669 UGGT2Q9NYU1 1516 aa23.58■■□□□ 1.36
SAPCD1-208ENST00000415669 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
SAPCD1-208ENST00000415669 KIAA0556O60303 1618 aa23.54■■□□□ 1.36
SAPCD1-208ENST00000415669 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
SAPCD1-208ENST00000415669 CARMIL2Q6F5E8 1435 aa23.51■■□□□ 1.35
SAPCD1-208ENST00000415669 DISP1Q96F81 1524 aa23.51■■□□□ 1.35
SAPCD1-208ENST00000415669 SAMD9Q5K651 1589 aa23.44■■□□□ 1.34
SAPCD1-208ENST00000415669 UBTFP17480 764 aaKnown RBP23.44■■□□□ 1.34
SAPCD1-208ENST00000415669 TNIKQ9UKE5 1360 aa23.4■■□□□ 1.34
SAPCD1-208ENST00000415669 TTBK1Q5TCY1 1321 aaPredicted RBP23.38■■□□□ 1.33
SAPCD1-208ENST00000415669 RANGAP1P46060 587 aaPredicted RBP23.37■■□□□ 1.33
SAPCD1-208ENST00000415669 PTPRGP23470 1445 aa23.36■■□□□ 1.33
SAPCD1-208ENST00000415669 EFCAB5A4FU69 1503 aa23.36■■□□□ 1.33
SAPCD1-208ENST00000415669 ADCY10Q96PN6 1610 aa23.35■■□□□ 1.33
SAPCD1-208ENST00000415669 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
SAPCD1-208ENST00000415669 FHOD3Q2V2M9 1422 aa23.26■■□□□ 1.31
SAPCD1-208ENST00000415669 ABCC2Q92887 1545 aa23.25■■□□□ 1.31
SAPCD1-208ENST00000415669 UACAQ9BZF9 1416 aa23.24■■□□□ 1.31
SAPCD1-208ENST00000415669 ARHGAP35Q9NRY4 1499 aa23.23■■□□□ 1.31
SAPCD1-208ENST00000415669 ABCA8O94911 1581 aa23.23■■□□□ 1.31
SAPCD1-208ENST00000415669 PLB1Q6P1J6 1458 aa23.22■■□□□ 1.31
SAPCD1-208ENST00000415669 UHRF1BP1LA0JNW5 1464 aa23.21■■□□□ 1.31
SAPCD1-208ENST00000415669 RAPGEF6Q8TEU7 1601 aa23.19■■□□□ 1.3
SAPCD1-208ENST00000415669 ZCCHC11Q5TAX3 1644 aaKnown RBP23.17■■□□□ 1.3
SAPCD1-208ENST00000415669 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
SAPCD1-208ENST00000415669 CLIP1P30622 1438 aa23.15■■□□□ 1.3
SAPCD1-208ENST00000415669 NPM1P06748 294 aaKnown RBP eCLIP23.13■■□□□ 1.29
SAPCD1-208ENST00000415669 MAPKBP1O60336 1514 aa23.13■■□□□ 1.29
SAPCD1-208ENST00000415669 CEP162Q5TB80 1403 aa23.11■■□□□ 1.29
SAPCD1-208ENST00000415669 KDM5BQ9UGL1 1544 aa23.11■■□□□ 1.29
SAPCD1-208ENST00000415669 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
SAPCD1-208ENST00000415669 KIF13AQ9H1H9 1805 aa23.06■■□□□ 1.28
SAPCD1-208ENST00000415669 HECW1Q76N89 1606 aa23.05■■□□□ 1.28
SAPCD1-208ENST00000415669 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
SAPCD1-208ENST00000415669 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
SAPCD1-208ENST00000415669 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
SAPCD1-208ENST00000415669 DIP2BQ9P265 1576 aa23.01■■□□□ 1.27
SAPCD1-208ENST00000415669 ASXL2Q76L83 1435 aa23■■□□□ 1.27
SAPCD1-208ENST00000415669 ARID3CA6NKF2 412 aa23■■□□□ 1.27
SAPCD1-208ENST00000415669 LRRIQ1Q96JM4 1722 aa22.99■■□□□ 1.27
SAPCD1-208ENST00000415669 ATP10BO94823 1461 aa22.97■■□□□ 1.27
SAPCD1-208ENST00000415669 ABCC10Q5T3U5 1492 aa22.95■■□□□ 1.26
SAPCD1-208ENST00000415669 CDK13Q14004 1512 aaKnown RBP22.94■■□□□ 1.26
SAPCD1-208ENST00000415669 WDR7Q9Y4E6 1490 aa22.94■■□□□ 1.26
SAPCD1-208ENST00000415669 FYCO1Q9BQS8 1478 aa22.92■■□□□ 1.26
SAPCD1-208ENST00000415669 ATP1B4Q9UN42 357 aaPredicted RBP22.92■■□□□ 1.26
SAPCD1-208ENST00000415669 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
SAPCD1-208ENST00000415669 EPRSP07814 1512 aaKnown RBP22.91■■□□□ 1.26
SAPCD1-208ENST00000415669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
SAPCD1-208ENST00000415669 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
SAPCD1-208ENST00000415669 TSPOAP1O95153 1857 aa22.89■■□□□ 1.25
SAPCD1-208ENST00000415669 GLI2P10070 1586 aa22.87■■□□□ 1.25
SAPCD1-208ENST00000415669 CCDC18Q5T9S5 1454 aa22.85■■□□□ 1.25
SAPCD1-208ENST00000415669 FAM69CQ0P6D2 419 aa22.85■■□□□ 1.25
SAPCD1-208ENST00000415669 MAP3K4Q9Y6R4 1608 aa22.83■■□□□ 1.25
SAPCD1-208ENST00000415669 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
SAPCD1-208ENST00000415669 VPS8Q8N3P4 1428 aa22.81■■□□□ 1.24
SAPCD1-208ENST00000415669 PPRC1Q5VV67 1664 aaKnown RBP22.78■■□□□ 1.24
SAPCD1-208ENST00000415669 KCNH8Q96L42 1107 aa22.77■■□□□ 1.24
SAPCD1-208ENST00000415669 ABCA9Q8IUA7 1624 aa22.77■■□□□ 1.24
SAPCD1-208ENST00000415669 PLEKHD1A6NEE1 506 aa22.75■■□□□ 1.23
SAPCD1-208ENST00000415669 KIF14Q15058 1648 aa22.74■■□□□ 1.23
SAPCD1-208ENST00000415669 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
SAPCD1-208ENST00000415669 CDK11AQ9UQ88 783 aaPredicted RBP22.71■■□□□ 1.23
SAPCD1-208ENST00000415669 MAGI3Q5TCQ9 1506 aa22.71■■□□□ 1.23
SAPCD1-208ENST00000415669 TROQ12816 1431 aaPredicted RBP22.7■■□□□ 1.22
SAPCD1-208ENST00000415669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.69■■□□□ 1.22
SAPCD1-208ENST00000415669 TIAM1Q13009 1591 aa22.68■■□□□ 1.22
SAPCD1-208ENST00000415669 MYO5CQ9NQX4 1742 aa22.67■■□□□ 1.22
SAPCD1-208ENST00000415669 CD109Q6YHK3 1445 aa22.66■■□□□ 1.22
SAPCD1-208ENST00000415669 TEX14Q8IWB6 1497 aa22.65■■□□□ 1.22
SAPCD1-208ENST00000415669 EHBP1L1Q8N3D4 1523 aa22.64■■□□□ 1.21
SAPCD1-208ENST00000415669 KDM6BO15054 1643 aa22.6■■□□□ 1.21
SAPCD1-208ENST00000415669 MTUS2Q5JR59 1369 aa22.6■■□□□ 1.21
SAPCD1-208ENST00000415669 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
SAPCD1-208ENST00000415669 MAP3K1Q13233 1512 aa22.57■■□□□ 1.2
SAPCD1-208ENST00000415669 CDC42BPAQ5VT25 1732 aa22.57■■□□□ 1.2
SAPCD1-208ENST00000415669 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
SAPCD1-208ENST00000415669 PREX2Q70Z35 1606 aa22.57■■□□□ 1.2
SAPCD1-208ENST00000415669 CDC42BPBQ9Y5S2 1711 aa22.54■■□□□ 1.2
SAPCD1-208ENST00000415669 LRRC9Q6ZRR7 1453 aa22.52■■□□□ 1.2
SAPCD1-208ENST00000415669 ITSN2Q9NZM3 1697 aa22.51■■□□□ 1.19
SAPCD1-208ENST00000415669 ARHGAP5Q13017 1502 aa22.51■■□□□ 1.19
SAPCD1-208ENST00000415669 ARAP3Q8WWN8 1544 aa22.51■■□□□ 1.19
SAPCD1-208ENST00000415669 FANCAO15360 1455 aa22.5■■□□□ 1.19
SAPCD1-208ENST00000415669 NEO1Q92859 1461 aa22.5■■□□□ 1.19
SAPCD1-208ENST00000415669 APLP2Q06481 763 aa22.5■■□□□ 1.19
SAPCD1-208ENST00000415669 PLCH2O75038 1416 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms