RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 PRXQ9BXM0 1461 aa30.72■■■□□ 2.51
AP1S3-205ENST00000415298 GRIN2BQ13224 1484 aa30.71■■■□□ 2.51
AP1S3-205ENST00000415298 RAPGEF2Q9Y4G8 1499 aa30.71■■■□□ 2.51
AP1S3-205ENST00000415298 ERICH3Q5RHP9 1530 aa30.7■■■□□ 2.51
AP1S3-205ENST00000415298 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
AP1S3-205ENST00000415298 SNAPC4Q5SXM2 1469 aa30.62■■■□□ 2.49
AP1S3-205ENST00000415298 KIF21BO75037 1637 aa30.62■■■□□ 2.49
AP1S3-205ENST00000415298 GOLGA3Q08378 1498 aa30.58■■■□□ 2.49
AP1S3-205ENST00000415298 CUL7Q14999 1698 aa30.56■■■□□ 2.48
AP1S3-205ENST00000415298 FBLN2P98095 1184 aa30.53■■■□□ 2.48
AP1S3-205ENST00000415298 FHAD1B1AJZ9 1412 aa30.52■■■□□ 2.48
AP1S3-205ENST00000415298 ADAMTS12P58397 1594 aa30.51■■■□□ 2.48
AP1S3-205ENST00000415298 MAGI1Q96QZ7 1491 aaPredicted RBP30.48■■■□□ 2.47
AP1S3-205ENST00000415298 CHMP7Q8WUX9 453 aaPredicted RBP30.47■■■□□ 2.47
AP1S3-205ENST00000415298 RANGAP1P46060 587 aaPredicted RBP30.45■■■□□ 2.46
AP1S3-205ENST00000415298 SYNJ2O15056 1496 aa30.41■■■□□ 2.46
AP1S3-205ENST00000415298 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
AP1S3-205ENST00000415298 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
AP1S3-205ENST00000415298 CHD1O14646 1710 aa30.26■■■□□ 2.44
AP1S3-205ENST00000415298 CEP162Q5TB80 1403 aa30.24■■■□□ 2.43
AP1S3-205ENST00000415298 DIEXFQ68CQ4 756 aaKnown RBP30.21■■■□□ 2.43
AP1S3-205ENST00000415298 CEP170Q5SW79 1584 aa30.2■■■□□ 2.43
AP1S3-205ENST00000415298 CTTNBP2Q8WZ74 1663 aa30.18■■■□□ 2.42
AP1S3-205ENST00000415298 NUP160Q12769 1436 aa30.15■■■□□ 2.42
AP1S3-205ENST00000415298 CLIP1P30622 1438 aa30.13■■■□□ 2.41
AP1S3-205ENST00000415298 ANO8Q9HCE9 1232 aaPredicted RBP30.11■■■□□ 2.41
AP1S3-205ENST00000415298 P3H3Q8IVL6 736 aa30.1■■■□□ 2.41
AP1S3-205ENST00000415298 KIAA0586Q9BVV6 1533 aa30.1■■■□□ 2.41
AP1S3-205ENST00000415298 DAXXQ9UER7 740 aaPredicted RBP30.1■■■□□ 2.41
AP1S3-205ENST00000415298 EIF5BO60841 1220 aaKnown RBP30.09■■■□□ 2.41
AP1S3-205ENST00000415298 TSHZ2Q9NRE2 1034 aa30.09■■■□□ 2.41
AP1S3-205ENST00000415298 IQGAP2Q13576 1575 aa30.07■■■□□ 2.4
AP1S3-205ENST00000415298 UBE2Q2Q8WVN8 375 aa30.06■■■□□ 2.4
AP1S3-205ENST00000415298 ARHGAP35Q9NRY4 1499 aa30.02■■■□□ 2.4
AP1S3-205ENST00000415298 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
AP1S3-205ENST00000415298 OSCARQ8IYS5 282 aa29.97■■■□□ 2.39
AP1S3-205ENST00000415298 ARAP1Q96P48 1450 aa29.95■■■□□ 2.38
AP1S3-205ENST00000415298 FHOD3Q2V2M9 1422 aa29.9■■■□□ 2.38
AP1S3-205ENST00000415298 UGGT2Q9NYU1 1516 aa29.89■■■□□ 2.38
AP1S3-205ENST00000415298 CLASP1Q7Z460 1538 aa29.88■■■□□ 2.37
AP1S3-205ENST00000415298 DISP1Q96F81 1524 aa29.86■■■□□ 2.37
AP1S3-205ENST00000415298 SAMD9Q5K651 1589 aa29.86■■■□□ 2.37
AP1S3-205ENST00000415298 CLSPNQ9HAW4 1339 aa29.85■■■□□ 2.37
AP1S3-205ENST00000415298 PRG4Q92954 1404 aaPredicted RBP29.82■■■□□ 2.36
AP1S3-205ENST00000415298 EFCAB5A4FU69 1503 aa29.82■■■□□ 2.36
AP1S3-205ENST00000415298 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
AP1S3-205ENST00000415298 KIAA0556O60303 1618 aa29.77■■■□□ 2.36
AP1S3-205ENST00000415298 SHROOM2Q13796 1616 aa29.76■■■□□ 2.35
AP1S3-205ENST00000415298 VPS8Q8N3P4 1428 aa29.75■■■□□ 2.35
AP1S3-205ENST00000415298 YTHDC1Q96MU7 727 aaKnown RBP29.74■■■□□ 2.35
AP1S3-205ENST00000415298 CARMIL2Q6F5E8 1435 aa29.72■■■□□ 2.35
AP1S3-205ENST00000415298 ATP1B4Q9UN42 357 aaPredicted RBP29.68■■■□□ 2.34
AP1S3-205ENST00000415298 SUPT16HQ9Y5B9 1047 aaKnown RBP29.68■■■□□ 2.34
AP1S3-205ENST00000415298 FMN1Q68DA7 1419 aa29.62■■■□□ 2.33
AP1S3-205ENST00000415298 PCF11O94913 1555 aaKnown RBP29.57■■■□□ 2.32
AP1S3-205ENST00000415298 ARID3CA6NKF2 412 aa29.57■■■□□ 2.32
AP1S3-205ENST00000415298 PTPRGP23470 1445 aa29.57■■■□□ 2.32
AP1S3-205ENST00000415298 PLB1Q6P1J6 1458 aa29.54■■■□□ 2.32
AP1S3-205ENST00000415298 SALL2Q9Y467 1007 aaPredicted RBP29.53■■■□□ 2.32
AP1S3-205ENST00000415298 CASKIN1Q8WXD9 1431 aa29.51■■■□□ 2.31
AP1S3-205ENST00000415298 MYT1LQ9UL68 1186 aa29.49■■■□□ 2.31
AP1S3-205ENST00000415298 ERICH6BQ5W0A0 696 aa29.49■■■□□ 2.31
AP1S3-205ENST00000415298 FYCO1Q9BQS8 1478 aa29.45■■■□□ 2.3
AP1S3-205ENST00000415298 KANK4Q5T7N3 995 aaPredicted RBP29.44■■■□□ 2.3
AP1S3-205ENST00000415298 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
AP1S3-205ENST00000415298 LRRIQ1Q96JM4 1722 aa29.42■■■□□ 2.3
AP1S3-205ENST00000415298 RAPGEF6Q8TEU7 1601 aa29.41■■■□□ 2.3
AP1S3-205ENST00000415298 NUP153P49790 1475 aaKnown RBP29.39■■■□□ 2.3
AP1S3-205ENST00000415298 ABCA8O94911 1581 aa29.38■■■□□ 2.29
AP1S3-205ENST00000415298 UACAQ9BZF9 1416 aa29.36■■■□□ 2.29
AP1S3-205ENST00000415298 CDK13Q14004 1512 aaKnown RBP29.35■■■□□ 2.29
AP1S3-205ENST00000415298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.34■■■□□ 2.29
AP1S3-205ENST00000415298 PLEKHG5O94827 1062 aa29.34■■■□□ 2.29
AP1S3-205ENST00000415298 HNRNPUL2Q1KMD3 747 aaKnown RBP29.34■■■□□ 2.29
AP1S3-205ENST00000415298 HECW1Q76N89 1606 aa29.34■■■□□ 2.29
AP1S3-205ENST00000415298 EPRSP07814 1512 aaKnown RBP29.33■■■□□ 2.29
AP1S3-205ENST00000415298 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
AP1S3-205ENST00000415298 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
AP1S3-205ENST00000415298 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
AP1S3-205ENST00000415298 CCDC136Q96JN2 1154 aa29.32■■■□□ 2.28
AP1S3-205ENST00000415298 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
AP1S3-205ENST00000415298 CYB5RLQ6IPT4 315 aa29.31■■■□□ 2.28
AP1S3-205ENST00000415298 PKNOX2Q96KN3 472 aa29.31■■■□□ 2.28
AP1S3-205ENST00000415298 ATP10BO94823 1461 aa29.25■■■□□ 2.27
AP1S3-205ENST00000415298 ABCC2Q92887 1545 aa29.24■■■□□ 2.27
AP1S3-205ENST00000415298 CFAP43Q8NDM7 1665 aa29.23■■■□□ 2.27
AP1S3-205ENST00000415298 MAP3K1Q13233 1512 aa29.22■■■□□ 2.27
AP1S3-205ENST00000415298 CCER1Q8TC90 406 aaPredicted RBP29.22■■■□□ 2.27
AP1S3-205ENST00000415298 LRRC9Q6ZRR7 1453 aa29.22■■■□□ 2.27
AP1S3-205ENST00000415298 CCDC18Q5T9S5 1454 aa29.21■■■□□ 2.27
AP1S3-205ENST00000415298 ZNF316A6NFI3 1004 aaPredicted RBP29.21■■■□□ 2.27
AP1S3-205ENST00000415298 DEKP35659 375 aaKnown RBP29.21■■■□□ 2.27
AP1S3-205ENST00000415298 MAGI3Q5TCQ9 1506 aa29.21■■■□□ 2.27
AP1S3-205ENST00000415298 ADCY10Q96PN6 1610 aa29.2■■■□□ 2.26
AP1S3-205ENST00000415298 MIER1Q8N108 512 aa29.19■■■□□ 2.26
AP1S3-205ENST00000415298 RBM19Q9Y4C8 960 aaKnown RBP29.19■■■□□ 2.26
AP1S3-205ENST00000415298 MTUS2Q5JR59 1369 aa29.17■■■□□ 2.26
AP1S3-205ENST00000415298 UHRF1BP1LA0JNW5 1464 aa29.16■■■□□ 2.26
AP1S3-205ENST00000415298 PODXL2Q9NZ53 605 aa29.14■■■□□ 2.25
AP1S3-205ENST00000415298 KDM5BQ9UGL1 1544 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms