RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
PRKD1-202ENST00000415220 LRRC9Q6ZRR7 1453 aa21.51■■□□□ 1.03
PRKD1-202ENST00000415220 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
PRKD1-202ENST00000415220 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
PRKD1-202ENST00000415220 RAB3GAP2Q9H2M9 1393 aa21.49■■□□□ 1.03
PRKD1-202ENST00000415220 ATP1B4Q9UN42 357 aaPredicted RBP21.49■■□□□ 1.03
PRKD1-202ENST00000415220 FHOD3Q2V2M9 1422 aa21.49■■□□□ 1.03
PRKD1-202ENST00000415220 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
PRKD1-202ENST00000415220 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
PRKD1-202ENST00000415220 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
PRKD1-202ENST00000415220 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
PRKD1-202ENST00000415220 FAM50AQ14320 339 aaKnown RBP21.42■■□□□ 1.02
PRKD1-202ENST00000415220 PELP1Q8IZL8 1130 aaKnown RBP21.41■■□□□ 1.02
PRKD1-202ENST00000415220 DNAJC5BQ9UF47 199 aa21.4■■□□□ 1.02
PRKD1-202ENST00000415220 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
PRKD1-202ENST00000415220 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
PRKD1-202ENST00000415220 SETD5Q9C0A6 1442 aa21.35■■□□□ 1.01
PRKD1-202ENST00000415220 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
PRKD1-202ENST00000415220 CUL7Q14999 1698 aa21.33■■□□□ 1
PRKD1-202ENST00000415220 WDR97A6NE52 1622 aa21.32■■□□□ 1
PRKD1-202ENST00000415220 TDRD9Q8NDG6 1382 aaKnown RBP21.32■■□□□ 1
PRKD1-202ENST00000415220 SIN3AQ96ST3 1273 aa21.32■■□□□ 1
PRKD1-202ENST00000415220 FYCO1Q9BQS8 1478 aa21.3■■□□□ 1
PRKD1-202ENST00000415220 EFCAB5A4FU69 1503 aa21.29■■□□□ 1
PRKD1-202ENST00000415220 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
PRKD1-202ENST00000415220 LRRIQ1Q96JM4 1722 aa21.25■□□□□ 0.99
PRKD1-202ENST00000415220 LAMC3Q9Y6N6 1575 aa21.25■□□□□ 0.99
PRKD1-202ENST00000415220 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
PRKD1-202ENST00000415220 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
PRKD1-202ENST00000415220 AQRO60306 1485 aaKnown RBP eCLIP21.22■□□□□ 0.99
PRKD1-202ENST00000415220 KIF21AQ7Z4S6 1674 aa21.2■□□□□ 0.98
PRKD1-202ENST00000415220 KCNH8Q96L42 1107 aa21.2■□□□□ 0.98
PRKD1-202ENST00000415220 GAPVD1Q14C86 1478 aa21.19■□□□□ 0.98
PRKD1-202ENST00000415220 SAMD9Q5K651 1589 aa21.17■□□□□ 0.98
PRKD1-202ENST00000415220 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
PRKD1-202ENST00000415220 PTPRKQ15262 1439 aa21.16■□□□□ 0.98
PRKD1-202ENST00000415220 FGD6Q6ZV73 1430 aa21.16■□□□□ 0.98
PRKD1-202ENST00000415220 HIRIP3Q9BW71 556 aaPredicted RBP21.13■□□□□ 0.97
PRKD1-202ENST00000415220 MTUS2Q5JR59 1369 aa21.12■□□□□ 0.97
PRKD1-202ENST00000415220 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
PRKD1-202ENST00000415220 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
PRKD1-202ENST00000415220 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
PRKD1-202ENST00000415220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.08■□□□□ 0.97
PRKD1-202ENST00000415220 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
PRKD1-202ENST00000415220 DDX10Q13206 875 aaKnown RBP21.07■□□□□ 0.96
PRKD1-202ENST00000415220 MAGI3Q5TCQ9 1506 aa21.06■□□□□ 0.96
PRKD1-202ENST00000415220 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
PRKD1-202ENST00000415220 PTPN23Q9H3S7 1636 aa21.02■□□□□ 0.96
PRKD1-202ENST00000415220 PPP1R15AO75807 674 aaPredicted RBP21.01■□□□□ 0.95
PRKD1-202ENST00000415220 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
PRKD1-202ENST00000415220 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
PRKD1-202ENST00000415220 HFM1A2PYH4 1435 aa20.99■□□□□ 0.95
PRKD1-202ENST00000415220 SUPT6HQ7KZ85 1726 aaKnown RBP20.99■□□□□ 0.95
PRKD1-202ENST00000415220 ARID3CA6NKF2 412 aa20.99■□□□□ 0.95
PRKD1-202ENST00000415220 NAIPQ13075 1403 aa20.98■□□□□ 0.95
PRKD1-202ENST00000415220 SUPT16HQ9Y5B9 1047 aaKnown RBP20.97■□□□□ 0.95
PRKD1-202ENST00000415220 EHBP1L1Q8N3D4 1523 aa20.96■□□□□ 0.95
PRKD1-202ENST00000415220 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
PRKD1-202ENST00000415220 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
PRKD1-202ENST00000415220 UACAQ9BZF9 1416 aa20.94■□□□□ 0.94
PRKD1-202ENST00000415220 CHIC2Q9UKJ5 165 aa20.93■□□□□ 0.94
PRKD1-202ENST00000415220 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
PRKD1-202ENST00000415220 RRP7BPQ9NSQ0 103 aa20.92■□□□□ 0.94
PRKD1-202ENST00000415220 TIMELESSQ9UNS1 1208 aa20.91■□□□□ 0.94
PRKD1-202ENST00000415220 CDK13Q14004 1512 aaKnown RBP20.91■□□□□ 0.94
PRKD1-202ENST00000415220 TONSLQ96HA7 1378 aa20.9■□□□□ 0.94
PRKD1-202ENST00000415220 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
PRKD1-202ENST00000415220 IQGAP2Q13576 1575 aa20.89■□□□□ 0.94
PRKD1-202ENST00000415220 KDM6BO15054 1643 aa20.89■□□□□ 0.93
PRKD1-202ENST00000415220 EPRSP07814 1512 aaKnown RBP20.86■□□□□ 0.93
PRKD1-202ENST00000415220 KDM5BQ9UGL1 1544 aa20.86■□□□□ 0.93
PRKD1-202ENST00000415220 ZNF608Q9ULD9 1512 aaPredicted RBP20.86■□□□□ 0.93
PRKD1-202ENST00000415220 HECW1Q76N89 1606 aa20.86■□□□□ 0.93
PRKD1-202ENST00000415220 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
PRKD1-202ENST00000415220 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
PRKD1-202ENST00000415220 WDR62O43379 1518 aa20.82■□□□□ 0.92
PRKD1-202ENST00000415220 TCOF1Q13428 1488 aaKnown RBP20.81■□□□□ 0.92
PRKD1-202ENST00000415220 GCC2Q8IWJ2 1684 aa20.79■□□□□ 0.92
PRKD1-202ENST00000415220 FOXD1Q16676 465 aa20.77■□□□□ 0.91
PRKD1-202ENST00000415220 TRIM52Q96A61 297 aa20.76■□□□□ 0.91
PRKD1-202ENST00000415220 ANP32CO43423 234 aa20.72■□□□□ 0.91
PRKD1-202ENST00000415220 DISP1Q96F81 1524 aa20.72■□□□□ 0.91
PRKD1-202ENST00000415220 BCANQ96GW7 911 aa20.72■□□□□ 0.91
PRKD1-202ENST00000415220 ZNF644Q9H582 1327 aaPredicted RBP20.72■□□□□ 0.91
PRKD1-202ENST00000415220 KIAA0556O60303 1618 aa20.69■□□□□ 0.9
PRKD1-202ENST00000415220 MPHOSPH9Q99550 1183 aa20.68■□□□□ 0.9
PRKD1-202ENST00000415220 MIA2Q96PC5 1412 aa20.67■□□□□ 0.9
PRKD1-202ENST00000415220 NUP153P49790 1475 aaKnown RBP20.67■□□□□ 0.9
PRKD1-202ENST00000415220 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
PRKD1-202ENST00000415220 CCER2I3L3R5 266 aa20.67■□□□□ 0.9
PRKD1-202ENST00000415220 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
PRKD1-202ENST00000415220 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
PRKD1-202ENST00000415220 AKNAQ7Z591 1439 aa20.64■□□□□ 0.89
PRKD1-202ENST00000415220 FKBP8Q14318 412 aa20.64■□□□□ 0.89
PRKD1-202ENST00000415220 DAPK1P53355 1430 aa20.64■□□□□ 0.89
PRKD1-202ENST00000415220 KIAA0586Q9BVV6 1533 aa20.64■□□□□ 0.89
PRKD1-202ENST00000415220 WASHC2AQ641Q2 1341 aa20.63■□□□□ 0.89
PRKD1-202ENST00000415220 ABCC5O15440 1437 aa20.62■□□□□ 0.89
PRKD1-202ENST00000415220 RAPGEF6Q8TEU7 1601 aa20.62■□□□□ 0.89
PRKD1-202ENST00000415220 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms