RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
TTC39A-208ENST00000413473 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
TTC39A-208ENST00000413473 ATP1B4Q9UN42 357 aaPredicted RBP21.73■■□□□ 1.07
TTC39A-208ENST00000413473 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
TTC39A-208ENST00000413473 FAM50AQ14320 339 aaKnown RBP21.71■■□□□ 1.07
TTC39A-208ENST00000413473 SETD5Q9C0A6 1442 aa21.7■■□□□ 1.06
TTC39A-208ENST00000413473 MAPKBP1O60336 1514 aa21.68■■□□□ 1.06
TTC39A-208ENST00000413473 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
TTC39A-208ENST00000413473 PCF11O94913 1555 aaKnown RBP21.66■■□□□ 1.06
TTC39A-208ENST00000413473 FHOD3Q2V2M9 1422 aa21.66■■□□□ 1.06
TTC39A-208ENST00000413473 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
TTC39A-208ENST00000413473 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
TTC39A-208ENST00000413473 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
TTC39A-208ENST00000413473 NESP48681 1621 aa21.62■■□□□ 1.05
TTC39A-208ENST00000413473 CFAP43Q8NDM7 1665 aa21.62■■□□□ 1.05
TTC39A-208ENST00000413473 SIN3AQ96ST3 1273 aa21.58■■□□□ 1.05
TTC39A-208ENST00000413473 FYCO1Q9BQS8 1478 aa21.57■■□□□ 1.04
TTC39A-208ENST00000413473 CASKIN1Q8WXD9 1431 aa21.56■■□□□ 1.04
TTC39A-208ENST00000413473 EFCAB5A4FU69 1503 aa21.56■■□□□ 1.04
TTC39A-208ENST00000413473 CUL7Q14999 1698 aa21.53■■□□□ 1.04
TTC39A-208ENST00000413473 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.04
TTC39A-208ENST00000413473 CTTNBP2Q8WZ74 1663 aa21.49■■□□□ 1.03
TTC39A-208ENST00000413473 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
TTC39A-208ENST00000413473 FMN1Q68DA7 1419 aa21.48■■□□□ 1.03
TTC39A-208ENST00000413473 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.03
TTC39A-208ENST00000413473 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
TTC39A-208ENST00000413473 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
TTC39A-208ENST00000413473 TIMELESSQ9UNS1 1208 aa21.45■■□□□ 1.02
TTC39A-208ENST00000413473 KCNH8Q96L42 1107 aa21.44■■□□□ 1.02
TTC39A-208ENST00000413473 DDX10Q13206 875 aaKnown RBP21.42■■□□□ 1.02
TTC39A-208ENST00000413473 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
TTC39A-208ENST00000413473 SNAPC4Q5SXM2 1469 aa21.42■■□□□ 1.02
TTC39A-208ENST00000413473 MTUS2Q5JR59 1369 aa21.42■■□□□ 1.02
TTC39A-208ENST00000413473 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
TTC39A-208ENST00000413473 SUPT16HQ9Y5B9 1047 aaKnown RBP21.4■■□□□ 1.02
TTC39A-208ENST00000413473 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
TTC39A-208ENST00000413473 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
TTC39A-208ENST00000413473 ABCA5Q8WWZ7 1642 aa21.35■■□□□ 1.01
TTC39A-208ENST00000413473 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
TTC39A-208ENST00000413473 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
TTC39A-208ENST00000413473 SAMD9Q5K651 1589 aa21.34■■□□□ 1.01
TTC39A-208ENST00000413473 PDS5BQ9NTI5 1447 aa21.32■■□□□ 1
TTC39A-208ENST00000413473 DNAJC5BQ9UF47 199 aa21.31■■□□□ 1
TTC39A-208ENST00000413473 CCDC18Q5T9S5 1454 aa21.31■■□□□ 1
TTC39A-208ENST00000413473 GRIN2BQ13224 1484 aa21.3■■□□□ 1
TTC39A-208ENST00000413473 NCOA2Q15596 1464 aa21.3■■□□□ 1
TTC39A-208ENST00000413473 HFM1A2PYH4 1435 aa21.3■■□□□ 1
TTC39A-208ENST00000413473 LRRIQ1Q96JM4 1722 aa21.29■■□□□ 1
TTC39A-208ENST00000413473 TONSLQ96HA7 1378 aa21.28■■□□□ 1
TTC39A-208ENST00000413473 MYOM3Q5VTT5 1437 aa21.28■■□□□ 1
TTC39A-208ENST00000413473 UACAQ9BZF9 1416 aa21.27■■□□□ 1
TTC39A-208ENST00000413473 PTPN23Q9H3S7 1636 aa21.24■□□□□ 0.99
TTC39A-208ENST00000413473 NAIPQ13075 1403 aa21.24■□□□□ 0.99
TTC39A-208ENST00000413473 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
TTC39A-208ENST00000413473 THOC2Q8NI27 1593 aaKnown RBP21.21■□□□□ 0.99
TTC39A-208ENST00000413473 EHBP1L1Q8N3D4 1523 aa21.2■□□□□ 0.98
TTC39A-208ENST00000413473 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
TTC39A-208ENST00000413473 ANP32CO43423 234 aa21.18■□□□□ 0.98
TTC39A-208ENST00000413473 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
TTC39A-208ENST00000413473 MAGI3Q5TCQ9 1506 aa21.16■□□□□ 0.98
TTC39A-208ENST00000413473 UGGT2Q9NYU1 1516 aa21.16■□□□□ 0.98
TTC39A-208ENST00000413473 RRP7BPQ9NSQ0 103 aa21.16■□□□□ 0.98
TTC39A-208ENST00000413473 CCER2I3L3R5 266 aa21.16■□□□□ 0.98
TTC39A-208ENST00000413473 CHIC2Q9UKJ5 165 aa21.15■□□□□ 0.98
TTC39A-208ENST00000413473 ARHGEF11O15085 1522 aa21.14■□□□□ 0.97
TTC39A-208ENST00000413473 MYT1Q01538 1121 aa21.09■□□□□ 0.97
TTC39A-208ENST00000413473 TRIM52Q96A61 297 aa21.08■□□□□ 0.96
TTC39A-208ENST00000413473 ARID3CA6NKF2 412 aa21.07■□□□□ 0.96
TTC39A-208ENST00000413473 TCOF1Q13428 1488 aaKnown RBP21.07■□□□□ 0.96
TTC39A-208ENST00000413473 EPRSP07814 1512 aaKnown RBP21.07■□□□□ 0.96
TTC39A-208ENST00000413473 IQGAP2Q13576 1575 aa21.07■□□□□ 0.96
TTC39A-208ENST00000413473 HECW1Q76N89 1606 aa21.07■□□□□ 0.96
TTC39A-208ENST00000413473 FKBP8Q14318 412 aa21.06■□□□□ 0.96
TTC39A-208ENST00000413473 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
TTC39A-208ENST00000413473 KDM5BQ9UGL1 1544 aa21.05■□□□□ 0.96
TTC39A-208ENST00000413473 BCANQ96GW7 911 aa21.05■□□□□ 0.96
TTC39A-208ENST00000413473 TSHZ2Q9NRE2 1034 aa21.04■□□□□ 0.96
TTC39A-208ENST00000413473 CDK13Q14004 1512 aaKnown RBP21.03■□□□□ 0.96
TTC39A-208ENST00000413473 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
TTC39A-208ENST00000413473 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
TTC39A-208ENST00000413473 MIA2Q96PC5 1412 aa21■□□□□ 0.95
TTC39A-208ENST00000413473 MPHOSPH9Q99550 1183 aa20.99■□□□□ 0.95
TTC39A-208ENST00000413473 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
TTC39A-208ENST00000413473 KDM6BO15054 1643 aa20.98■□□□□ 0.95
TTC39A-208ENST00000413473 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
TTC39A-208ENST00000413473 WDR62O43379 1518 aa20.97■□□□□ 0.95
TTC39A-208ENST00000413473 HSPA5P11021 654 aaKnown RBP20.97■□□□□ 0.95
TTC39A-208ENST00000413473 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.95
TTC39A-208ENST00000413473 NEFLP07196 543 aa20.95■□□□□ 0.94
TTC39A-208ENST00000413473 FOXD1Q16676 465 aa20.94■□□□□ 0.94
TTC39A-208ENST00000413473 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
TTC39A-208ENST00000413473 L3MBTL2Q969R5 705 aa20.92■□□□□ 0.94
TTC39A-208ENST00000413473 EIF4G2P78344 907 aaKnown RBP eCLIP20.91■□□□□ 0.94
TTC39A-208ENST00000413473 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
TTC39A-208ENST00000413473 ZNF644Q9H582 1327 aaPredicted RBP20.88■□□□□ 0.93
TTC39A-208ENST00000413473 DAPK1P53355 1430 aa20.86■□□□□ 0.93
TTC39A-208ENST00000413473 KIAA0586Q9BVV6 1533 aa20.86■□□□□ 0.93
TTC39A-208ENST00000413473 DISP1Q96F81 1524 aa20.85■□□□□ 0.93
TTC39A-208ENST00000413473 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
TTC39A-208ENST00000413473 ROCK1Q13464 1354 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms