RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
PRDM2-206ENST00000413440 ZNF608Q9ULD9 1512 aaPredicted RBP8.55□□□□□ -1.04
PRDM2-206ENST00000413440 POLA1P09884 1462 aaPredicted RBP8.53□□□□□ -1.04
PRDM2-206ENST00000413440 SCAF1Q9H7N4 1312 aaKnown RBP8.53□□□□□ -1.04
PRDM2-206ENST00000413440 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
PRDM2-206ENST00000413440 PEG3Q9GZU2 1588 aa8.52□□□□□ -1.05
PRDM2-206ENST00000413440 PRG4Q92954 1404 aaPredicted RBP8.51□□□□□ -1.05
PRDM2-206ENST00000413440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.51□□□□□ -1.05
PRDM2-206ENST00000413440 SYNJ1O43426 1573 aa8.51□□□□□ -1.05
PRDM2-206ENST00000413440 CHGAP10645 457 aaKnown RBP8.51□□□□□ -1.05
PRDM2-206ENST00000413440 PTPRGP23470 1445 aa8.51□□□□□ -1.05
PRDM2-206ENST00000413440 WDR62O43379 1518 aa8.5□□□□□ -1.05
PRDM2-206ENST00000413440 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
PRDM2-206ENST00000413440 PRDM2Q13029 1718 aa8.49□□□□□ -1.05
PRDM2-206ENST00000413440 CUX1P39880 1505 aa8.49□□□□□ -1.05
PRDM2-206ENST00000413440 FHAD1B1AJZ9 1412 aa8.47□□□□□ -1.05
PRDM2-206ENST00000413440 THOC2Q8NI27 1593 aaKnown RBP8.46□□□□□ -1.06
PRDM2-206ENST00000413440 SYNJ2O15056 1496 aa8.45□□□□□ -1.06
PRDM2-206ENST00000413440 EIF4G3O43432 1585 aaKnown RBP8.45□□□□□ -1.06
PRDM2-206ENST00000413440 RAPGEF2Q9Y4G8 1499 aa8.43□□□□□ -1.06
PRDM2-206ENST00000413440 MTUS2Q5JR59 1369 aa8.43□□□□□ -1.06
PRDM2-206ENST00000413440 SLC4A1APQ9BWU0 796 aaKnown RBP8.43□□□□□ -1.06
PRDM2-206ENST00000413440 CHIC2Q9UKJ5 165 aa8.42□□□□□ -1.06
PRDM2-206ENST00000413440 MAGI1Q96QZ7 1491 aaPredicted RBP8.42□□□□□ -1.06
PRDM2-206ENST00000413440 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
PRDM2-206ENST00000413440 TNIKQ9UKE5 1360 aa8.4□□□□□ -1.06
PRDM2-206ENST00000413440 CLIP1P30622 1438 aa8.4□□□□□ -1.06
PRDM2-206ENST00000413440 TSPY4P0CV99 314 aa8.4□□□□□ -1.06
PRDM2-206ENST00000413440 TSPY10P0CW01 314 aa8.4□□□□□ -1.06
PRDM2-206ENST00000413440 MYT1Q01538 1121 aa8.4□□□□□ -1.07
PRDM2-206ENST00000413440 GOLGA3Q08378 1498 aa8.39□□□□□ -1.07
PRDM2-206ENST00000413440 CFDP1Q9UEE9 299 aaPredicted RBP8.39□□□□□ -1.07
PRDM2-206ENST00000413440 PLEKHG5O94827 1062 aa8.38□□□□□ -1.07
PRDM2-206ENST00000413440 PPP1R15AO75807 674 aaPredicted RBP8.37□□□□□ -1.07
PRDM2-206ENST00000413440 GRIN2AQ12879 1464 aa8.37□□□□□ -1.07
PRDM2-206ENST00000413440 TRIM26Q12899 539 aaPredicted RBP8.37□□□□□ -1.07
PRDM2-206ENST00000413440 GGT6Q6P531 493 aa8.37□□□□□ -1.07
PRDM2-206ENST00000413440 PBRM1Q86U86 1689 aa8.36□□□□□ -1.07
PRDM2-206ENST00000413440 CHD1O14646 1710 aa8.36□□□□□ -1.07
PRDM2-206ENST00000413440 TOP2BQ02880 1626 aa8.36□□□□□ -1.07
PRDM2-206ENST00000413440 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
PRDM2-206ENST00000413440 FHOD3Q2V2M9 1422 aa8.36□□□□□ -1.07
PRDM2-206ENST00000413440 IGF1RP08069 1367 aa8.36□□□□□ -1.07
PRDM2-206ENST00000413440 RUSC2Q8N2Y8 1516 aa8.34□□□□□ -1.07
PRDM2-206ENST00000413440 DCAF8L1A6NGE4 600 aa8.34□□□□□ -1.07
PRDM2-206ENST00000413440 ZEB1P37275 1124 aaPredicted RBP8.34□□□□□ -1.07
PRDM2-206ENST00000413440 POLR3GLQ9BT43 218 aa8.34□□□□□ -1.07
PRDM2-206ENST00000413440 EEA1Q15075 1411 aa8.34□□□□□ -1.07
PRDM2-206ENST00000413440 ABCA10Q8WWZ4 1543 aa8.34□□□□□ -1.07
PRDM2-206ENST00000413440 CCNB3Q8WWL7 1395 aa8.33□□□□□ -1.08
PRDM2-206ENST00000413440 EFCAB2Q5VUJ9 269 aa8.33□□□□□ -1.08
PRDM2-206ENST00000413440 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
PRDM2-206ENST00000413440 ARHGEF11O15085 1522 aa8.3□□□□□ -1.08
PRDM2-206ENST00000413440 HNRNPMP52272 730 aaKnown RBP eCLIP8.3□□□□□ -1.08
PRDM2-206ENST00000413440 ERICH3Q5RHP9 1530 aa8.28□□□□□ -1.08
PRDM2-206ENST00000413440 RIMBP3CA6NJZ7 1639 aa8.28□□□□□ -1.08
PRDM2-206ENST00000413440 RIMBP3BA6NNM3 1639 aa8.28□□□□□ -1.08
PRDM2-206ENST00000413440 RIMBP3Q9UFD9 1639 aa8.28□□□□□ -1.08
PRDM2-206ENST00000413440 RRP7BPQ9NSQ0 103 aa8.27□□□□□ -1.08
PRDM2-206ENST00000413440 CUL7Q14999 1698 aa8.27□□□□□ -1.09
PRDM2-206ENST00000413440 TSPOAP1O95153 1857 aa8.26□□□□□ -1.09
PRDM2-206ENST00000413440 IQGAP2Q13576 1575 aa8.26□□□□□ -1.09
PRDM2-206ENST00000413440 UACAQ9BZF9 1416 aa8.26□□□□□ -1.09
PRDM2-206ENST00000413440 ADAMTS12P58397 1594 aa8.25□□□□□ -1.09
PRDM2-206ENST00000413440 RAPGEF3O95398 923 aa8.25□□□□□ -1.09
PRDM2-206ENST00000413440 HAP1P54257 671 aaPredicted RBP8.25□□□□□ -1.09
PRDM2-206ENST00000413440 ERICH6Q7L0X2 663 aa8.25□□□□□ -1.09
PRDM2-206ENST00000413440 KIAA0586Q9BVV6 1533 aa8.25□□□□□ -1.09
PRDM2-206ENST00000413440 SPAG9O60271 1321 aaKnown RBP8.24□□□□□ -1.09
PRDM2-206ENST00000413440 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
PRDM2-206ENST00000413440 SLC24A1O60721 1099 aa8.24□□□□□ -1.09
PRDM2-206ENST00000413440 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
PRDM2-206ENST00000413440 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
PRDM2-206ENST00000413440 CD109Q6YHK3 1445 aa8.23□□□□□ -1.09
PRDM2-206ENST00000413440 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
PRDM2-206ENST00000413440 CNGB1Q14028 1251 aaPredicted RBP8.23□□□□□ -1.09
PRDM2-206ENST00000413440 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
PRDM2-206ENST00000413440 ARHGAP5Q13017 1502 aa8.23□□□□□ -1.09
PRDM2-206ENST00000413440 KIF3BO15066 747 aa8.22□□□□□ -1.09
PRDM2-206ENST00000413440 KANK1Q14678 1352 aa8.22□□□□□ -1.09
PRDM2-206ENST00000413440 TARBP1Q13395 1621 aaKnown RBP8.22□□□□□ -1.09
PRDM2-206ENST00000413440 CEP162Q5TB80 1403 aa8.22□□□□□ -1.09
PRDM2-206ENST00000413440 WASHC2CQ9Y4E1 1318 aa8.21□□□□□ -1.1
PRDM2-206ENST00000413440 A0A0G2JS52 829 aa8.21□□□□□ -1.1
PRDM2-206ENST00000413440 CEP170Q5SW79 1584 aa8.21□□□□□ -1.1
PRDM2-206ENST00000413440 ASXL2Q76L83 1435 aa8.2□□□□□ -1.1
PRDM2-206ENST00000413440 HRCP23327 699 aa8.2□□□□□ -1.1
PRDM2-206ENST00000413440 PIP4K2BP78356 416 aa8.2□□□□□ -1.1
PRDM2-206ENST00000413440 PHF23Q9BUL5 403 aaPredicted RBP8.19□□□□□ -1.1
PRDM2-206ENST00000413440 CENPBP07199 599 aaPredicted RBP8.18□□□□□ -1.1
PRDM2-206ENST00000413440 PLB1Q6P1J6 1458 aa8.18□□□□□ -1.1
PRDM2-206ENST00000413440 MEX3CQ5U5Q3 659 aaKnown RBP8.18□□□□□ -1.1
PRDM2-206ENST00000413440 NEFMP07197 916 aa8.18□□□□□ -1.1
PRDM2-206ENST00000413440 CCDC18Q5T9S5 1454 aa8.18□□□□□ -1.1
PRDM2-206ENST00000413440 POGZQ7Z3K3 1410 aa8.18□□□□□ -1.1
PRDM2-206ENST00000413440 EID1Q9Y6B2 187 aa8.18□□□□□ -1.1
PRDM2-206ENST00000413440 LMOD2Q6P5Q4 547 aa8.17□□□□□ -1.1
PRDM2-206ENST00000413440 TEX14Q8IWB6 1497 aa8.17□□□□□ -1.1
PRDM2-206ENST00000413440 ARAP1Q96P48 1450 aa8.17□□□□□ -1.1
PRDM2-206ENST00000413440 NUTM2DQ5VT03 806 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms