RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
TRAFD1-202ENST00000412615 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
TRAFD1-202ENST00000412615 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
TRAFD1-202ENST00000412615 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
TRAFD1-202ENST00000412615 FHOD3Q2V2M9 1422 aa16.91■□□□□ 0.3
TRAFD1-202ENST00000412615 PCF11O94913 1555 aaKnown RBP16.91■□□□□ 0.3
TRAFD1-202ENST00000412615 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
TRAFD1-202ENST00000412615 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
TRAFD1-202ENST00000412615 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.37e-7■■■■□ 20.9
TRAFD1-202ENST00000412615 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
TRAFD1-202ENST00000412615 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
TRAFD1-202ENST00000412615 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
TRAFD1-202ENST00000412615 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
TRAFD1-202ENST00000412615 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
TRAFD1-202ENST00000412615 ITGAEP38570 1179 aa16.89■□□□□ 0.29
TRAFD1-202ENST00000412615 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
TRAFD1-202ENST00000412615 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
TRAFD1-202ENST00000412615 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
TRAFD1-202ENST00000412615 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-202ENST00000412615 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
TRAFD1-202ENST00000412615 ACIN1Q9UKV3 1341 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-202ENST00000412615 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
TRAFD1-202ENST00000412615 RAB3GAP2Q9H2M9 1393 aa16.82■□□□□ 0.28
TRAFD1-202ENST00000412615 SETD5Q9C0A6 1442 aa16.8■□□□□ 0.28
TRAFD1-202ENST00000412615 FAM50AQ14320 339 aaKnown RBP16.8■□□□□ 0.28
TRAFD1-202ENST00000412615 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
TRAFD1-202ENST00000412615 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
TRAFD1-202ENST00000412615 NEUROD1Q13562 356 aa16.78■□□□□ 0.28
TRAFD1-202ENST00000412615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRAFD1-202ENST00000412615 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.28
TRAFD1-202ENST00000412615 MIER1Q8N108 512 aa16.74■□□□□ 0.27
TRAFD1-202ENST00000412615 MRC2Q9UBG0 1479 aa16.74■□□□□ 0.27
TRAFD1-202ENST00000412615 MTUS2Q5JR59 1369 aa16.72■□□□□ 0.27
TRAFD1-202ENST00000412615 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
TRAFD1-202ENST00000412615 GRIN2BQ13224 1484 aa16.7■□□□□ 0.26
TRAFD1-202ENST00000412615 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
TRAFD1-202ENST00000412615 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
TRAFD1-202ENST00000412615 PBRM1Q86U86 1689 aa16.68■□□□□ 0.26
TRAFD1-202ENST00000412615 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
TRAFD1-202ENST00000412615 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
TRAFD1-202ENST00000412615 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
TRAFD1-202ENST00000412615 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
TRAFD1-202ENST00000412615 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
TRAFD1-202ENST00000412615 CCDC18Q5T9S5 1454 aa16.62■□□□□ 0.25
TRAFD1-202ENST00000412615 LRRIQ1Q96JM4 1722 aa16.62■□□□□ 0.25
TRAFD1-202ENST00000412615 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
TRAFD1-202ENST00000412615 MYOM3Q5VTT5 1437 aa16.62■□□□□ 0.25
TRAFD1-202ENST00000412615 YTHDC1Q96MU7 727 aaKnown RBP16.61■□□□□ 0.25
TRAFD1-202ENST00000412615 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
TRAFD1-202ENST00000412615 SUPT6HQ7KZ85 1726 aaKnown RBP16.6■□□□□ 0.25
TRAFD1-202ENST00000412615 WDR62O43379 1518 aa16.59■□□□□ 0.25
TRAFD1-202ENST00000412615 HECW1Q76N89 1606 aa16.57■□□□□ 0.24
TRAFD1-202ENST00000412615 HFM1A2PYH4 1435 aa16.56■□□□□ 0.24
TRAFD1-202ENST00000412615 SIN3AQ96ST3 1273 aa16.56■□□□□ 0.24
TRAFD1-202ENST00000412615 UGGT2Q9NYU1 1516 aa16.56■□□□□ 0.24
TRAFD1-202ENST00000412615 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
TRAFD1-202ENST00000412615 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
TRAFD1-202ENST00000412615 PTPRKQ15262 1439 aa16.54■□□□□ 0.24
TRAFD1-202ENST00000412615 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
TRAFD1-202ENST00000412615 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
TRAFD1-202ENST00000412615 KIAA0586Q9BVV6 1533 aa16.52■□□□□ 0.23
TRAFD1-202ENST00000412615 PTPN23Q9H3S7 1636 aa16.51■□□□□ 0.23
TRAFD1-202ENST00000412615 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
TRAFD1-202ENST00000412615 NAIPQ13075 1403 aa16.5■□□□□ 0.23
TRAFD1-202ENST00000412615 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
TRAFD1-202ENST00000412615 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
TRAFD1-202ENST00000412615 PPP1R15AO75807 674 aaPredicted RBP16.47■□□□□ 0.23
TRAFD1-202ENST00000412615 MIA2Q96PC5 1412 aa16.47■□□□□ 0.23
TRAFD1-202ENST00000412615 GRIN2AQ12879 1464 aa16.46■□□□□ 0.23
TRAFD1-202ENST00000412615 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.22
TRAFD1-202ENST00000412615 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
TRAFD1-202ENST00000412615 KIAA0556O60303 1618 aa16.44■□□□□ 0.22
TRAFD1-202ENST00000412615 DISP1Q96F81 1524 aa16.44■□□□□ 0.22
TRAFD1-202ENST00000412615 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
TRAFD1-202ENST00000412615 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
TRAFD1-202ENST00000412615 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
TRAFD1-202ENST00000412615 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
TRAFD1-202ENST00000412615 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-202ENST00000412615 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
TRAFD1-202ENST00000412615 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
TRAFD1-202ENST00000412615 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-202ENST00000412615 CHIC2Q9UKJ5 165 aa16.39■□□□□ 0.21
TRAFD1-202ENST00000412615 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
TRAFD1-202ENST00000412615 NUP153P49790 1475 aaKnown RBP16.37■□□□□ 0.21
TRAFD1-202ENST00000412615 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
TRAFD1-202ENST00000412615 GCC2Q8IWJ2 1684 aa16.36■□□□□ 0.21
TRAFD1-202ENST00000412615 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.21
TRAFD1-202ENST00000412615 TRIM52Q96A61 297 aa16.33■□□□□ 0.2
TRAFD1-202ENST00000412615 CEP170Q5SW79 1584 aa16.32■□□□□ 0.2
TRAFD1-202ENST00000412615 FBLN2P98095 1184 aa16.32■□□□□ 0.2
TRAFD1-202ENST00000412615 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
TRAFD1-202ENST00000412615 ROCK1Q13464 1354 aa16.31■□□□□ 0.2
TRAFD1-202ENST00000412615 DAPK1P53355 1430 aa16.3■□□□□ 0.2
TRAFD1-202ENST00000412615 NUP160Q12769 1436 aa16.3■□□□□ 0.2
TRAFD1-202ENST00000412615 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
TRAFD1-202ENST00000412615 TROQ12816 1431 aaPredicted RBP16.29■□□□□ 0.2
TRAFD1-202ENST00000412615 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
TRAFD1-202ENST00000412615 ABCC5O15440 1437 aa16.27■□□□□ 0.2
TRAFD1-202ENST00000412615 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.19
TRAFD1-202ENST00000412615 HIRIP3Q9BW71 556 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms