RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 FHAD1B1AJZ9 1412 aa18.46■□□□□ 0.55
SNRNP35-202ENST00000412157 CLIP1P30622 1438 aa18.46■□□□□ 0.55
SNRNP35-202ENST00000412157 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
SNRNP35-202ENST00000412157 SNAPC4Q5SXM2 1469 aa18.43■□□□□ 0.54
SNRNP35-202ENST00000412157 FBLN2P98095 1184 aa18.42■□□□□ 0.54
SNRNP35-202ENST00000412157 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
SNRNP35-202ENST00000412157 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
SNRNP35-202ENST00000412157 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
SNRNP35-202ENST00000412157 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.52
SNRNP35-202ENST00000412157 SYNJ2O15056 1496 aa18.33■□□□□ 0.52
SNRNP35-202ENST00000412157 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
SNRNP35-202ENST00000412157 EFCAB5A4FU69 1503 aa18.3■□□□□ 0.52
SNRNP35-202ENST00000412157 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
SNRNP35-202ENST00000412157 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
SNRNP35-202ENST00000412157 IQGAP2Q13576 1575 aa18.29■□□□□ 0.52
SNRNP35-202ENST00000412157 SAMD9Q5K651 1589 aa18.23■□□□□ 0.51
SNRNP35-202ENST00000412157 CHMP7Q8WUX9 453 aaPredicted RBP18.23■□□□□ 0.51
SNRNP35-202ENST00000412157 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
SNRNP35-202ENST00000412157 KIAA0586Q9BVV6 1533 aa18.19■□□□□ 0.5
SNRNP35-202ENST00000412157 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
SNRNP35-202ENST00000412157 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
SNRNP35-202ENST00000412157 NUP160Q12769 1436 aa18.15■□□□□ 0.5
SNRNP35-202ENST00000412157 FHOD3Q2V2M9 1422 aa18.14■□□□□ 0.49
SNRNP35-202ENST00000412157 APLP2Q06481 763 aa18.12■□□□□ 0.49
SNRNP35-202ENST00000412157 PCF11O94913 1555 aaKnown RBP18.11■□□□□ 0.49
SNRNP35-202ENST00000412157 KIAA0556O60303 1618 aa18.1■□□□□ 0.49
SNRNP35-202ENST00000412157 FMN1Q68DA7 1419 aa18.09■□□□□ 0.49
SNRNP35-202ENST00000412157 P3H3Q8IVL6 736 aa18.09■□□□□ 0.49
SNRNP35-202ENST00000412157 AEBP2Q6ZN18 517 aaPredicted RBP18.08■□□□□ 0.48
SNRNP35-202ENST00000412157 CFAP43Q8NDM7 1665 aa18.06■□□□□ 0.48
SNRNP35-202ENST00000412157 FYCO1Q9BQS8 1478 aa18.06■□□□□ 0.48
SNRNP35-202ENST00000412157 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
SNRNP35-202ENST00000412157 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
SNRNP35-202ENST00000412157 CASKIN1Q8WXD9 1431 aa18.02■□□□□ 0.48
SNRNP35-202ENST00000412157 DISP1Q96F81 1524 aa18.02■□□□□ 0.47
SNRNP35-202ENST00000412157 TIAM1Q13009 1591 aa18.01■□□□□ 0.47
SNRNP35-202ENST00000412157 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
SNRNP35-202ENST00000412157 CARMIL2Q6F5E8 1435 aa18■□□□□ 0.47
SNRNP35-202ENST00000412157 HECW1Q76N89 1606 aa18■□□□□ 0.47
SNRNP35-202ENST00000412157 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
SNRNP35-202ENST00000412157 LRRIQ1Q96JM4 1722 aa17.97■□□□□ 0.47
SNRNP35-202ENST00000412157 JPH4Q96JJ6 628 aa17.96■□□□□ 0.47
SNRNP35-202ENST00000412157 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
SNRNP35-202ENST00000412157 TTBK1Q5TCY1 1321 aaPredicted RBP17.95■□□□□ 0.46
SNRNP35-202ENST00000412157 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
SNRNP35-202ENST00000412157 RAPGEF6Q8TEU7 1601 aa17.93■□□□□ 0.46
SNRNP35-202ENST00000412157 CCDC18Q5T9S5 1454 aa17.91■□□□□ 0.46
SNRNP35-202ENST00000412157 ERCC6L2Q5T890 1561 aa17.91■□□□□ 0.46
SNRNP35-202ENST00000412157 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.46
SNRNP35-202ENST00000412157 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
SNRNP35-202ENST00000412157 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
SNRNP35-202ENST00000412157 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
SNRNP35-202ENST00000412157 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
SNRNP35-202ENST00000412157 ABCA8O94911 1581 aa17.81■□□□□ 0.44
SNRNP35-202ENST00000412157 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
SNRNP35-202ENST00000412157 CDK13Q14004 1512 aaKnown RBP17.79■□□□□ 0.44
SNRNP35-202ENST00000412157 NUP153P49790 1475 aaKnown RBP17.79■□□□□ 0.44
SNRNP35-202ENST00000412157 PLB1Q6P1J6 1458 aa17.78■□□□□ 0.44
SNRNP35-202ENST00000412157 PTPRGP23470 1445 aa17.78■□□□□ 0.44
SNRNP35-202ENST00000412157 MTUS2Q5JR59 1369 aa17.78■□□□□ 0.44
SNRNP35-202ENST00000412157 KIF13AQ9H1H9 1805 aa17.72■□□□□ 0.43
SNRNP35-202ENST00000412157 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
SNRNP35-202ENST00000412157 RRBP1Q9P2E9 1410 aaKnown RBP17.7■□□□□ 0.42
SNRNP35-202ENST00000412157 ABCC2Q92887 1545 aa17.69■□□□□ 0.42
SNRNP35-202ENST00000412157 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
SNRNP35-202ENST00000412157 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
SNRNP35-202ENST00000412157 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
SNRNP35-202ENST00000412157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
SNRNP35-202ENST00000412157 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
SNRNP35-202ENST00000412157 ADCY10Q96PN6 1610 aa17.67■□□□□ 0.42
SNRNP35-202ENST00000412157 NCOA2Q15596 1464 aa17.67■□□□□ 0.42
SNRNP35-202ENST00000412157 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
SNRNP35-202ENST00000412157 CCNB3Q8WWL7 1395 aa17.65■□□□□ 0.42
SNRNP35-202ENST00000412157 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.41
SNRNP35-202ENST00000412157 ATP10BO94823 1461 aa17.63■□□□□ 0.41
SNRNP35-202ENST00000412157 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
SNRNP35-202ENST00000412157 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
SNRNP35-202ENST00000412157 NPM1P06748 294 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNRNP35-202ENST00000412157 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
SNRNP35-202ENST00000412157 KIF14Q15058 1648 aa17.61■□□□□ 0.41
SNRNP35-202ENST00000412157 MYOM3Q5VTT5 1437 aa17.61■□□□□ 0.41
SNRNP35-202ENST00000412157 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
SNRNP35-202ENST00000412157 ABCC10Q5T3U5 1492 aa17.58■□□□□ 0.41
SNRNP35-202ENST00000412157 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.41
SNRNP35-202ENST00000412157 PTPN23Q9H3S7 1636 aa17.58■□□□□ 0.4
SNRNP35-202ENST00000412157 PLEKHD1A6NEE1 506 aa17.56■□□□□ 0.4
SNRNP35-202ENST00000412157 DIP2BQ9P265 1576 aa17.56■□□□□ 0.4
SNRNP35-202ENST00000412157 MAPKBP1O60336 1514 aa17.56■□□□□ 0.4
SNRNP35-202ENST00000412157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNRNP35-202ENST00000412157 KDM5BQ9UGL1 1544 aa17.54■□□□□ 0.4
SNRNP35-202ENST00000412157 CDC42BPAQ5VT25 1732 aa17.52■□□□□ 0.4
SNRNP35-202ENST00000412157 KDM6BO15054 1643 aa17.52■□□□□ 0.4
SNRNP35-202ENST00000412157 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
SNRNP35-202ENST00000412157 MIA2Q96PC5 1412 aa17.52■□□□□ 0.4
SNRNP35-202ENST00000412157 TSPOAP1O95153 1857 aa17.51■□□□□ 0.39
SNRNP35-202ENST00000412157 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
SNRNP35-202ENST00000412157 MYO5CQ9NQX4 1742 aa17.47■□□□□ 0.39
SNRNP35-202ENST00000412157 PREX2Q70Z35 1606 aa17.46■□□□□ 0.39
SNRNP35-202ENST00000412157 ITGAEP38570 1179 aa17.45■□□□□ 0.38
SNRNP35-202ENST00000412157 GPATCH8Q9UKJ3 1502 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms