RNA–Protein interactions for RNA: ENST00000412134.5

LINC01249-201, Transcript of long intergenic non-protein coding RNA 1249, humanhuman

TSL 1 (best) BASIC

Gene LINC01249, Length 2,663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01249-201ENST00000412134 SYNJ1O43426 1573 aa9.09□□□□□ -0.95
LINC01249-201ENST00000412134 TAOK2Q9UL54 1235 aa9.09□□□□□ -0.95
LINC01249-201ENST00000412134 HOXD11P31277 338 aaPredicted RBP9.08□□□□□ -0.96
LINC01249-201ENST00000412134 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
LINC01249-201ENST00000412134 FBLN2P98095 1184 aa9.08□□□□□ -0.96
LINC01249-201ENST00000412134 MAGI1Q96QZ7 1491 aaPredicted RBP9.07□□□□□ -0.96
LINC01249-201ENST00000412134 MSH5O43196 834 aa9.07□□□□□ -0.96
LINC01249-201ENST00000412134 SNAPC4Q5SXM2 1469 aa9.06□□□□□ -0.96
LINC01249-201ENST00000412134 MAPK8IP2Q13387 824 aaPredicted RBP9.04□□□□□ -0.96
LINC01249-201ENST00000412134 FBXO3Q9UK99 471 aa9.04□□□□□ -0.96
LINC01249-201ENST00000412134 RAD54L2Q9Y4B4 1467 aa9.04□□□□□ -0.96
LINC01249-201ENST00000412134 SOGA1O94964 1423 aa9.03□□□□□ -0.96
LINC01249-201ENST00000412134 SYNJ2O15056 1496 aa9.03□□□□□ -0.96
LINC01249-201ENST00000412134 GAPVD1Q14C86 1478 aa9.03□□□□□ -0.96
LINC01249-201ENST00000412134 TDRD9Q8NDG6 1382 aaKnown RBP9.03□□□□□ -0.96
LINC01249-201ENST00000412134 GRIN2BQ13224 1484 aa9.02□□□□□ -0.97
LINC01249-201ENST00000412134 CHMP7Q8WUX9 453 aaPredicted RBP9.01□□□□□ -0.97
LINC01249-201ENST00000412134 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
LINC01249-201ENST00000412134 FGD5Q6ZNL6 1462 aa8.99□□□□□ -0.97
LINC01249-201ENST00000412134 PBRM1Q86U86 1689 aa8.96□□□□□ -0.97
LINC01249-201ENST00000412134 KIF13AQ9H1H9 1805 aa8.94□□□□□ -0.98
LINC01249-201ENST00000412134 CUX1P39880 1505 aa8.94□□□□□ -0.98
LINC01249-201ENST00000412134 DMRT2Q9Y5R5 561 aa8.93□□□□□ -0.98
LINC01249-201ENST00000412134 ABCA5Q8WWZ7 1642 aa8.92□□□□□ -0.98
LINC01249-201ENST00000412134 SHROOM2Q13796 1616 aa8.92□□□□□ -0.98
LINC01249-201ENST00000412134 ERCC6L2Q5T890 1561 aa8.92□□□□□ -0.98
LINC01249-201ENST00000412134 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
LINC01249-201ENST00000412134 CEP170Q5SW79 1584 aa8.91□□□□□ -0.98
LINC01249-201ENST00000412134 NUP160Q12769 1436 aa8.91□□□□□ -0.98
LINC01249-201ENST00000412134 GRIN2AQ12879 1464 aa8.9□□□□□ -0.98
LINC01249-201ENST00000412134 TPRNQ4KMQ1 711 aa8.88□□□□□ -0.99
LINC01249-201ENST00000412134 ADAMTS12P58397 1594 aa8.87□□□□□ -0.99
LINC01249-201ENST00000412134 ERICH6Q7L0X2 663 aa8.86□□□□□ -0.99
LINC01249-201ENST00000412134 ABCC10Q5T3U5 1492 aa8.85□□□□□ -0.99
LINC01249-201ENST00000412134 ILDR1Q86SU0 546 aaPredicted RBP8.85□□□□□ -0.99
LINC01249-201ENST00000412134 MAPKBP1O60336 1514 aa8.84□□□□□ -0.99
LINC01249-201ENST00000412134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.84□□□□□ -0.99
LINC01249-201ENST00000412134 HNRNPUL2Q1KMD3 747 aaKnown RBP8.84□□□□□ -0.99
LINC01249-201ENST00000412134 KDM4FA0A1W2PPD8 638 aa8.83□□□□□ -1
LINC01249-201ENST00000412134 DIP2BQ9P265 1576 aa8.82□□□□□ -1
LINC01249-201ENST00000412134 FHAD1B1AJZ9 1412 aa8.82□□□□□ -1
LINC01249-201ENST00000412134 DAXXQ9UER7 740 aaPredicted RBP8.82□□□□□ -1
LINC01249-201ENST00000412134 SAMD1Q6SPF0 538 aaPredicted RBP8.81□□□□□ -1
LINC01249-201ENST00000412134 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.81□□□□□ -1
LINC01249-201ENST00000412134 KDM6BO15054 1643 aa8.8□□□□□ -1
LINC01249-201ENST00000412134 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
LINC01249-201ENST00000412134 BBXQ8WY36 941 aaPredicted RBP8.8□□□□□ -1
LINC01249-201ENST00000412134 ARXQ96QS3 562 aa8.8□□□□□ -1
LINC01249-201ENST00000412134 VASPP50552 380 aaPredicted RBP8.79□□□□□ -1
LINC01249-201ENST00000412134 PRG4Q92954 1404 aaPredicted RBP8.79□□□□□ -1
LINC01249-201ENST00000412134 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
LINC01249-201ENST00000412134 WRNQ14191 1432 aaPredicted RBP eCLIP8.79□□□□□ -1
LINC01249-201ENST00000412134 PROM2Q8N271 834 aa8.77□□□□□ -1
LINC01249-201ENST00000412134 ATF5Q9Y2D1 282 aaPredicted RBP8.76□□□□□ -1.01
LINC01249-201ENST00000412134 ADCY10Q96PN6 1610 aa8.76□□□□□ -1.01
LINC01249-201ENST00000412134 JPH4Q96JJ6 628 aa8.76□□□□□ -1.01
LINC01249-201ENST00000412134 BIVM-ERCC5R4GMW8 1640 aa8.75□□□□□ -1.01
LINC01249-201ENST00000412134 RUSC2Q8N2Y8 1516 aa8.75□□□□□ -1.01
LINC01249-201ENST00000412134 NPM1P06748 294 aaKnown RBP eCLIP8.75□□□□□ -1.01
LINC01249-201ENST00000412134 TOP2BQ02880 1626 aa8.74□□□□□ -1.01
LINC01249-201ENST00000412134 KDM2AQ9Y2K7 1162 aa8.74□□□□□ -1.01
LINC01249-201ENST00000412134 PKD2Q13563 968 aa8.72□□□□□ -1.01
LINC01249-201ENST00000412134 SPDYE4A6NLX3 237 aa8.72□□□□□ -1.01
LINC01249-201ENST00000412134 TSPOAP1O95153 1857 aa8.72□□□□□ -1.01
LINC01249-201ENST00000412134 ADGRL1O94910 1474 aa8.7□□□□□ -1.02
LINC01249-201ENST00000412134 GLI2P10070 1586 aa8.69□□□□□ -1.02
LINC01249-201ENST00000412134 IFNLR1Q8IU57 520 aaPredicted RBP8.69□□□□□ -1.02
LINC01249-201ENST00000412134 PPRC1Q5VV67 1664 aaKnown RBP8.69□□□□□ -1.02
LINC01249-201ENST00000412134 HECW2Q9P2P5 1572 aa8.68□□□□□ -1.02
LINC01249-201ENST00000412134 KIAA0586Q9BVV6 1533 aa8.67□□□□□ -1.02
LINC01249-201ENST00000412134 TIMELESSQ9UNS1 1208 aa8.66□□□□□ -1.02
LINC01249-201ENST00000412134 PLB1Q6P1J6 1458 aa8.65□□□□□ -1.03
LINC01249-201ENST00000412134 ABCC2Q92887 1545 aa8.65□□□□□ -1.03
LINC01249-201ENST00000412134 PAXIP1Q6ZW49 1069 aaPredicted RBP8.64□□□□□ -1.03
LINC01249-201ENST00000412134 ZNF219Q9P2Y4 722 aaPredicted RBP8.63□□□□□ -1.03
LINC01249-201ENST00000412134 UHRF1BP1LA0JNW5 1464 aa8.62□□□□□ -1.03
LINC01249-201ENST00000412134 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
LINC01249-201ENST00000412134 ASXL2Q76L83 1435 aa8.62□□□□□ -1.03
LINC01249-201ENST00000412134 MAP3K4Q9Y6R4 1608 aa8.62□□□□□ -1.03
LINC01249-201ENST00000412134 COL17A1Q9UMD9 1497 aaPredicted RBP8.62□□□□□ -1.03
LINC01249-201ENST00000412134 PTPRGP23470 1445 aa8.61□□□□□ -1.03
LINC01249-201ENST00000412134 APLP2Q06481 763 aa8.61□□□□□ -1.03
LINC01249-201ENST00000412134 CUL7Q14999 1698 aa8.61□□□□□ -1.03
LINC01249-201ENST00000412134 TULP1O00294 542 aaPredicted RBP8.6□□□□□ -1.03
LINC01249-201ENST00000412134 TEX14Q8IWB6 1497 aa8.6□□□□□ -1.03
LINC01249-201ENST00000412134 FBXO41Q8TF61 875 aa8.59□□□□□ -1.03
LINC01249-201ENST00000412134 TNIKQ9UKE5 1360 aa8.59□□□□□ -1.03
LINC01249-201ENST00000412134 SPRYD3Q8NCJ5 442 aa8.59□□□□□ -1.03
LINC01249-201ENST00000412134 CFAP44Q96MT7 982 aa8.59□□□□□ -1.03
LINC01249-201ENST00000412134 EPRSP07814 1512 aaKnown RBP8.59□□□□□ -1.03
LINC01249-201ENST00000412134 CARMIL2Q6F5E8 1435 aa8.58□□□□□ -1.04
LINC01249-201ENST00000412134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC01249-201ENST00000412134 IGF1RP08069 1367 aa8.57□□□□□ -1.04
LINC01249-201ENST00000412134 KDM5BQ9UGL1 1544 aa8.57□□□□□ -1.04
LINC01249-201ENST00000412134 NBR1Q14596 966 aa8.57□□□□□ -1.04
LINC01249-201ENST00000412134 UACAQ9BZF9 1416 aa8.56□□□□□ -1.04
LINC01249-201ENST00000412134 ECM2O94769 699 aaPredicted RBP8.55□□□□□ -1.04
LINC01249-201ENST00000412134 SPOCK2Q92563 424 aa8.55□□□□□ -1.04
LINC01249-201ENST00000412134 HOMEZQ8IX15 550 aa8.54□□□□□ -1.04
LINC01249-201ENST00000412134 KIF27Q86VH2 1401 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms