RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 CARMIL1Q5VZK9 1371 aa24.95■■□□□ 1.58
TOM1-204ENST00000411850 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
TOM1-204ENST00000411850 MAP3K1Q13233 1512 aa24.9■■□□□ 1.58
TOM1-204ENST00000411850 GTF3C3Q9Y5Q9 886 aa24.9■■□□□ 1.58
TOM1-204ENST00000411850 CCNB3Q8WWL7 1395 aa24.89■■□□□ 1.57
TOM1-204ENST00000411850 MIER1Q8N108 512 aa24.86■■□□□ 1.57
TOM1-204ENST00000411850 TIAM1Q13009 1591 aa24.82■■□□□ 1.56
TOM1-204ENST00000411850 CUL7Q14999 1698 aa24.82■■□□□ 1.56
TOM1-204ENST00000411850 ABCA5Q8WWZ7 1642 aa24.81■■□□□ 1.56
TOM1-204ENST00000411850 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
TOM1-204ENST00000411850 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
TOM1-204ENST00000411850 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
TOM1-204ENST00000411850 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
TOM1-204ENST00000411850 FHAD1B1AJZ9 1412 aa24.72■■□□□ 1.55
TOM1-204ENST00000411850 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
TOM1-204ENST00000411850 YTHDC1Q96MU7 727 aaKnown RBP24.69■■□□□ 1.54
TOM1-204ENST00000411850 CFAP43Q8NDM7 1665 aa24.67■■□□□ 1.54
TOM1-204ENST00000411850 WDR62O43379 1518 aa24.65■■□□□ 1.54
TOM1-204ENST00000411850 RAB3GAP2Q9H2M9 1393 aa24.63■■□□□ 1.53
TOM1-204ENST00000411850 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
TOM1-204ENST00000411850 CTTNBP2Q8WZ74 1663 aa24.61■■□□□ 1.53
TOM1-204ENST00000411850 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
TOM1-204ENST00000411850 PHLDB1Q86UU1 1377 aa24.6■■□□□ 1.53
TOM1-204ENST00000411850 ITGAEP38570 1179 aa24.59■■□□□ 1.53
TOM1-204ENST00000411850 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
TOM1-204ENST00000411850 SETD5Q9C0A6 1442 aa24.57■■□□□ 1.52
TOM1-204ENST00000411850 FYCO1Q9BQS8 1478 aa24.56■■□□□ 1.52
TOM1-204ENST00000411850 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.523e-6■■■□□ 15.4
TOM1-204ENST00000411850 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
TOM1-204ENST00000411850 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
TOM1-204ENST00000411850 CASKIN1Q8WXD9 1431 aa24.52■■□□□ 1.52
TOM1-204ENST00000411850 FHOD3Q2V2M9 1422 aa24.51■■□□□ 1.51
TOM1-204ENST00000411850 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
TOM1-204ENST00000411850 P3H3Q8IVL6 736 aa24.49■■□□□ 1.51
TOM1-204ENST00000411850 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
TOM1-204ENST00000411850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.47■■□□□ 1.51
TOM1-204ENST00000411850 GRIN2BQ13224 1484 aa24.46■■□□□ 1.51
TOM1-204ENST00000411850 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
TOM1-204ENST00000411850 FAM50AQ14320 339 aaKnown RBP24.43■■□□□ 1.5
TOM1-204ENST00000411850 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
TOM1-204ENST00000411850 FMN1Q68DA7 1419 aa24.42■■□□□ 1.5
TOM1-204ENST00000411850 SAMD9Q5K651 1589 aa24.39■■□□□ 1.5
TOM1-204ENST00000411850 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
TOM1-204ENST00000411850 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
TOM1-204ENST00000411850 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
TOM1-204ENST00000411850 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
TOM1-204ENST00000411850 FGD6Q6ZV73 1430 aa24.3■■□□□ 1.48
TOM1-204ENST00000411850 IQGAP2Q13576 1575 aa24.26■■□□□ 1.47
TOM1-204ENST00000411850 SIN3AQ96ST3 1273 aa24.26■■□□□ 1.47
TOM1-204ENST00000411850 MTUS2Q5JR59 1369 aa24.23■■□□□ 1.47
TOM1-204ENST00000411850 LRRIQ1Q96JM4 1722 aa24.22■■□□□ 1.47
TOM1-204ENST00000411850 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.46
TOM1-204ENST00000411850 GRIN2AQ12879 1464 aa24.18■■□□□ 1.46
TOM1-204ENST00000411850 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
TOM1-204ENST00000411850 UGGT2Q9NYU1 1516 aa24.17■■□□□ 1.46
TOM1-204ENST00000411850 NCOA2Q15596 1464 aa24.16■■□□□ 1.46
TOM1-204ENST00000411850 MYOM3Q5VTT5 1437 aa24.16■■□□□ 1.46
TOM1-204ENST00000411850 EHBP1L1Q8N3D4 1523 aa24.16■■□□□ 1.46
TOM1-204ENST00000411850 CCDC18Q5T9S5 1454 aa24.15■■□□□ 1.46
TOM1-204ENST00000411850 PPP1R15AO75807 674 aaPredicted RBP24.15■■□□□ 1.46
TOM1-204ENST00000411850 KIAA0586Q9BVV6 1533 aa24.15■■□□□ 1.46
TOM1-204ENST00000411850 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
TOM1-204ENST00000411850 PTPRKQ15262 1439 aa24.14■■□□□ 1.46
TOM1-204ENST00000411850 PTPN23Q9H3S7 1636 aa24.14■■□□□ 1.45
TOM1-204ENST00000411850 UACAQ9BZF9 1416 aa24.13■■□□□ 1.45
TOM1-204ENST00000411850 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
TOM1-204ENST00000411850 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
TOM1-204ENST00000411850 NAIPQ13075 1403 aa24.08■■□□□ 1.45
TOM1-204ENST00000411850 DDX10Q13206 875 aaKnown RBP24.05■■□□□ 1.44
TOM1-204ENST00000411850 SUPT16HQ9Y5B9 1047 aaKnown RBP24.05■■□□□ 1.44
TOM1-204ENST00000411850 CHMP7Q8WUX9 453 aaPredicted RBP24.03■■□□□ 1.44
TOM1-204ENST00000411850 MAGI3Q5TCQ9 1506 aa24.03■■□□□ 1.44
TOM1-204ENST00000411850 DISP1Q96F81 1524 aa24.03■■□□□ 1.44
TOM1-204ENST00000411850 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
TOM1-204ENST00000411850 TONSLQ96HA7 1378 aa24.02■■□□□ 1.44
TOM1-204ENST00000411850 KCNH8Q96L42 1107 aa24.02■■□□□ 1.44
TOM1-204ENST00000411850 KIAA0556O60303 1618 aa24.02■■□□□ 1.44
TOM1-204ENST00000411850 HECW1Q76N89 1606 aa24.01■■□□□ 1.43
TOM1-204ENST00000411850 TCOF1Q13428 1488 aaKnown RBP24.01■■□□□ 1.43
TOM1-204ENST00000411850 NUP160Q12769 1436 aa23.99■■□□□ 1.43
TOM1-204ENST00000411850 EPRSP07814 1512 aaKnown RBP23.94■■□□□ 1.42
TOM1-204ENST00000411850 AKNAQ7Z591 1439 aa23.94■■□□□ 1.42
TOM1-204ENST00000411850 GCC2Q8IWJ2 1684 aa23.93■■□□□ 1.42
TOM1-204ENST00000411850 CCER2I3L3R5 266 aa23.92■■□□□ 1.42
TOM1-204ENST00000411850 FBLN2P98095 1184 aa23.91■■□□□ 1.42
TOM1-204ENST00000411850 MIA2Q96PC5 1412 aa23.9■■□□□ 1.42
TOM1-204ENST00000411850 KDM5BQ9UGL1 1544 aa23.9■■□□□ 1.42
TOM1-204ENST00000411850 HIRIP3Q9BW71 556 aaPredicted RBP23.88■■□□□ 1.41
TOM1-204ENST00000411850 ANP32CO43423 234 aa23.86■■□□□ 1.41
TOM1-204ENST00000411850 CDK13Q14004 1512 aaKnown RBP23.85■■□□□ 1.41
TOM1-204ENST00000411850 RAPGEF6Q8TEU7 1601 aa23.84■■□□□ 1.41
TOM1-204ENST00000411850 JPH4Q96JJ6 628 aa23.83■■□□□ 1.4
TOM1-204ENST00000411850 DENND4BO75064 1496 aaPredicted RBP23.82■■□□□ 1.4
TOM1-204ENST00000411850 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
TOM1-204ENST00000411850 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
TOM1-204ENST00000411850 CARMIL2Q6F5E8 1435 aa23.81■■□□□ 1.4
TOM1-204ENST00000411850 MYT1Q01538 1121 aa23.8■■□□□ 1.4
TOM1-204ENST00000411850 CHIC2Q9UKJ5 165 aa23.78■■□□□ 1.4
TOM1-204ENST00000411850 KDM6BO15054 1643 aa23.77■■□□□ 1.4
TOM1-204ENST00000411850 ROCK1Q13464 1354 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms