RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
TTC39A-207ENST00000411642 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
TTC39A-207ENST00000411642 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
TTC39A-207ENST00000411642 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.28
TTC39A-207ENST00000411642 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
TTC39A-207ENST00000411642 IQGAP2Q13576 1575 aa16.72■□□□□ 0.27
TTC39A-207ENST00000411642 KIF21BO75037 1637 aa16.72■□□□□ 0.27
TTC39A-207ENST00000411642 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
TTC39A-207ENST00000411642 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
TTC39A-207ENST00000411642 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
TTC39A-207ENST00000411642 PRG4Q92954 1404 aaPredicted RBP16.67■□□□□ 0.26
TTC39A-207ENST00000411642 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
TTC39A-207ENST00000411642 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
TTC39A-207ENST00000411642 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
TTC39A-207ENST00000411642 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
TTC39A-207ENST00000411642 CARMIL2Q6F5E8 1435 aa16.57■□□□□ 0.24
TTC39A-207ENST00000411642 DISP1Q96F81 1524 aa16.56■□□□□ 0.24
TTC39A-207ENST00000411642 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
TTC39A-207ENST00000411642 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
TTC39A-207ENST00000411642 SAMD9Q5K651 1589 aa16.5■□□□□ 0.23
TTC39A-207ENST00000411642 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
TTC39A-207ENST00000411642 PTPRGP23470 1445 aa16.47■□□□□ 0.23
TTC39A-207ENST00000411642 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-207ENST00000411642 ADCY10Q96PN6 1610 aa16.45■□□□□ 0.22
TTC39A-207ENST00000411642 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
TTC39A-207ENST00000411642 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
TTC39A-207ENST00000411642 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
TTC39A-207ENST00000411642 ABCC2Q92887 1545 aa16.38■□□□□ 0.21
TTC39A-207ENST00000411642 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
TTC39A-207ENST00000411642 UACAQ9BZF9 1416 aa16.37■□□□□ 0.21
TTC39A-207ENST00000411642 ABCA8O94911 1581 aa16.36■□□□□ 0.21
TTC39A-207ENST00000411642 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
TTC39A-207ENST00000411642 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
TTC39A-207ENST00000411642 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
TTC39A-207ENST00000411642 RAPGEF6Q8TEU7 1601 aa16.33■□□□□ 0.2
TTC39A-207ENST00000411642 ZCCHC11Q5TAX3 1644 aaKnown RBP16.31■□□□□ 0.2
TTC39A-207ENST00000411642 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
TTC39A-207ENST00000411642 LOC105371045A0A1W2PR82 267 aa16.3■□□□□ 0.2
TTC39A-207ENST00000411642 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
TTC39A-207ENST00000411642 CLIP1P30622 1438 aa16.29■□□□□ 0.2
TTC39A-207ENST00000411642 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
TTC39A-207ENST00000411642 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
TTC39A-207ENST00000411642 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
TTC39A-207ENST00000411642 FMN1Q68DA7 1419 aa16.25■□□□□ 0.19
TTC39A-207ENST00000411642 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
TTC39A-207ENST00000411642 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
TTC39A-207ENST00000411642 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
TTC39A-207ENST00000411642 DIP2BQ9P265 1576 aa16.21■□□□□ 0.19
TTC39A-207ENST00000411642 ASXL2Q76L83 1435 aa16.21■□□□□ 0.19
TTC39A-207ENST00000411642 PCF11O94913 1555 aaKnown RBP16.21■□□□□ 0.18
TTC39A-207ENST00000411642 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
TTC39A-207ENST00000411642 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
TTC39A-207ENST00000411642 ATP10BO94823 1461 aa16.19■□□□□ 0.18
TTC39A-207ENST00000411642 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
TTC39A-207ENST00000411642 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
TTC39A-207ENST00000411642 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.18
TTC39A-207ENST00000411642 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
TTC39A-207ENST00000411642 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
TTC39A-207ENST00000411642 CASKIN1Q8WXD9 1431 aa16.13■□□□□ 0.17
TTC39A-207ENST00000411642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
TTC39A-207ENST00000411642 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
TTC39A-207ENST00000411642 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
TTC39A-207ENST00000411642 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
TTC39A-207ENST00000411642 FAM69CQ0P6D2 419 aa16.12■□□□□ 0.17
TTC39A-207ENST00000411642 GLI2P10070 1586 aa16.12■□□□□ 0.17
TTC39A-207ENST00000411642 CCDC18Q5T9S5 1454 aa16.09■□□□□ 0.17
TTC39A-207ENST00000411642 MAP3K4Q9Y6R4 1608 aa16.08■□□□□ 0.17
TTC39A-207ENST00000411642 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.16
TTC39A-207ENST00000411642 PPRC1Q5VV67 1664 aaKnown RBP16.05■□□□□ 0.16
TTC39A-207ENST00000411642 VPS8Q8N3P4 1428 aa16.05■□□□□ 0.16
TTC39A-207ENST00000411642 KCNH8Q96L42 1107 aa16.05■□□□□ 0.16
TTC39A-207ENST00000411642 ABCA9Q8IUA7 1624 aa16.05■□□□□ 0.16
TTC39A-207ENST00000411642 PLEKHD1A6NEE1 506 aa16.04■□□□□ 0.16
TTC39A-207ENST00000411642 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
TTC39A-207ENST00000411642 KIF14Q15058 1648 aa16■□□□□ 0.15
TTC39A-207ENST00000411642 MAGI3Q5TCQ9 1506 aa15.99■□□□□ 0.15
TTC39A-207ENST00000411642 TROQ12816 1431 aaPredicted RBP15.99■□□□□ 0.15
TTC39A-207ENST00000411642 TTC37Q6PGP7 1564 aa15.99■□□□□ 0.15
TTC39A-207ENST00000411642 CD109Q6YHK3 1445 aa15.98■□□□□ 0.15
TTC39A-207ENST00000411642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.98■□□□□ 0.15
TTC39A-207ENST00000411642 MYO5CQ9NQX4 1742 aa15.96■□□□□ 0.15
TTC39A-207ENST00000411642 TEX14Q8IWB6 1497 aa15.96■□□□□ 0.14
TTC39A-207ENST00000411642 TIAM1Q13009 1591 aa15.96■□□□□ 0.14
TTC39A-207ENST00000411642 KDM6BO15054 1643 aa15.93■□□□□ 0.14
TTC39A-207ENST00000411642 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
TTC39A-207ENST00000411642 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
TTC39A-207ENST00000411642 CDC42BPAQ5VT25 1732 aa15.9■□□□□ 0.14
TTC39A-207ENST00000411642 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
TTC39A-207ENST00000411642 CFAP74Q9C0B2 1584 aa15.89■□□□□ 0.13
TTC39A-207ENST00000411642 CDC42BPBQ9Y5S2 1711 aa15.88■□□□□ 0.13
TTC39A-207ENST00000411642 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
TTC39A-207ENST00000411642 SUPT6HQ7KZ85 1726 aaKnown RBP15.88■□□□□ 0.13
TTC39A-207ENST00000411642 FANCAO15360 1455 aa15.85■□□□□ 0.13
TTC39A-207ENST00000411642 LRRC9Q6ZRR7 1453 aa15.85■□□□□ 0.13
TTC39A-207ENST00000411642 NEO1Q92859 1461 aa15.85■□□□□ 0.13
TTC39A-207ENST00000411642 ARAP3Q8WWN8 1544 aa15.85■□□□□ 0.13
TTC39A-207ENST00000411642 PLCH2O75038 1416 aa15.85■□□□□ 0.13
TTC39A-207ENST00000411642 ARHGAP5Q13017 1502 aa15.84■□□□□ 0.13
TTC39A-207ENST00000411642 ITSN2Q9NZM3 1697 aa15.83■□□□□ 0.13
TTC39A-207ENST00000411642 APLP2Q06481 763 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms