RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 ARHGEF11O15085 1522 aa15.68■□□□□ 0.1
RN7SKP3-201ENST00000411409 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
RN7SKP3-201ENST00000411409 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
RN7SKP3-201ENST00000411409 CYB5RLQ6IPT4 315 aa15.65■□□□□ 0.1
RN7SKP3-201ENST00000411409 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
RN7SKP3-201ENST00000411409 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
RN7SKP3-201ENST00000411409 NUP160Q12769 1436 aa15.61■□□□□ 0.09
RN7SKP3-201ENST00000411409 CHD1O14646 1710 aa15.61■□□□□ 0.09
RN7SKP3-201ENST00000411409 KIF21BO75037 1637 aa15.55■□□□□ 0.08
RN7SKP3-201ENST00000411409 TRHP20396 242 aaPredicted RBP15.55■□□□□ 0.08
RN7SKP3-201ENST00000411409 KIAA0586Q9BVV6 1533 aa15.54■□□□□ 0.08
RN7SKP3-201ENST00000411409 CLASP1Q7Z460 1538 aa15.53■□□□□ 0.08
RN7SKP3-201ENST00000411409 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
RN7SKP3-201ENST00000411409 ARAP1Q96P48 1450 aa15.5■□□□□ 0.07
RN7SKP3-201ENST00000411409 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
RN7SKP3-201ENST00000411409 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
RN7SKP3-201ENST00000411409 KCNA4P22459 653 aa15.47■□□□□ 0.07
RN7SKP3-201ENST00000411409 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
RN7SKP3-201ENST00000411409 SHROOM2Q13796 1616 aa15.44■□□□□ 0.06
RN7SKP3-201ENST00000411409 IQGAP2Q13576 1575 aa15.44■□□□□ 0.06
RN7SKP3-201ENST00000411409 CTTNBP2Q8WZ74 1663 aa15.41■□□□□ 0.06
RN7SKP3-201ENST00000411409 UGGT2Q9NYU1 1516 aa15.4■□□□□ 0.06
RN7SKP3-201ENST00000411409 CARMIL2Q6F5E8 1435 aa15.4■□□□□ 0.06
RN7SKP3-201ENST00000411409 UBTFP17480 764 aaKnown RBP15.37■□□□□ 0.05
RN7SKP3-201ENST00000411409 PRG4Q92954 1404 aaPredicted RBP15.36■□□□□ 0.05
RN7SKP3-201ENST00000411409 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
RN7SKP3-201ENST00000411409 PPP4R3CPQ6ZMV5 832 aa15.35■□□□□ 0.05
RN7SKP3-201ENST00000411409 EFCAB5A4FU69 1503 aa15.31■□□□□ 0.04
RN7SKP3-201ENST00000411409 DISP1Q96F81 1524 aa15.29■□□□□ 0.04
RN7SKP3-201ENST00000411409 SAMD9Q5K651 1589 aa15.27■□□□□ 0.03
RN7SKP3-201ENST00000411409 KIAA0556O60303 1618 aa15.26■□□□□ 0.03
RN7SKP3-201ENST00000411409 PTPRGP23470 1445 aa15.25■□□□□ 0.03
RN7SKP3-201ENST00000411409 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
RN7SKP3-201ENST00000411409 UHRF1BP1LA0JNW5 1464 aa15.19■□□□□ 0.02
RN7SKP3-201ENST00000411409 CLIP1P30622 1438 aa15.18■□□□□ 0.02
RN7SKP3-201ENST00000411409 FMN1Q68DA7 1419 aa15.18■□□□□ 0.02
RN7SKP3-201ENST00000411409 ARHGAP35Q9NRY4 1499 aa15.17■□□□□ 0.02
RN7SKP3-201ENST00000411409 MSH5O43196 834 aa15.17■□□□□ 0.02
RN7SKP3-201ENST00000411409 UACAQ9BZF9 1416 aa15.17■□□□□ 0.02
RN7SKP3-201ENST00000411409 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
RN7SKP3-201ENST00000411409 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
RN7SKP3-201ENST00000411409 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
RN7SKP3-201ENST00000411409 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
RN7SKP3-201ENST00000411409 ABCC2Q92887 1545 aa15.12■□□□□ 0.01
RN7SKP3-201ENST00000411409 FHOD3Q2V2M9 1422 aa15.11■□□□□ 0.01
RN7SKP3-201ENST00000411409 ABCA8O94911 1581 aa15.11■□□□□ 0.01
RN7SKP3-201ENST00000411409 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
RN7SKP3-201ENST00000411409 P3H3Q8IVL6 736 aa15.09■□□□□ 0.01
RN7SKP3-201ENST00000411409 KDM5BQ9UGL1 1544 aa15.07■□□□□ 0
RN7SKP3-201ENST00000411409 PLB1Q6P1J6 1458 aa15.06■□□□□ 0
RN7SKP3-201ENST00000411409 RAPGEF6Q8TEU7 1601 aa15.06■□□□□ 0
RN7SKP3-201ENST00000411409 ADCY10Q96PN6 1610 aa15.06■□□□□ 0
RN7SKP3-201ENST00000411409 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
RN7SKP3-201ENST00000411409 CASKIN1Q8WXD9 1431 aa15.05■□□□□ -0
RN7SKP3-201ENST00000411409 MAPKBP1O60336 1514 aa15.03■□□□□ -0
RN7SKP3-201ENST00000411409 FYCO1Q9BQS8 1478 aa15.02■□□□□ -0
RN7SKP3-201ENST00000411409 TTBK1Q5TCY1 1321 aaPredicted RBP15.01□□□□□ -0.01
RN7SKP3-201ENST00000411409 HECW1Q76N89 1606 aa15□□□□□ -0.01
RN7SKP3-201ENST00000411409 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
RN7SKP3-201ENST00000411409 NUP153P49790 1475 aaKnown RBP15□□□□□ -0.01
RN7SKP3-201ENST00000411409 CCDC18Q5T9S5 1454 aa15□□□□□ -0.01
RN7SKP3-201ENST00000411409 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
RN7SKP3-201ENST00000411409 ATP10BO94823 1461 aa14.98□□□□□ -0.01
RN7SKP3-201ENST00000411409 FAM69CQ0P6D2 419 aa14.98□□□□□ -0.01
RN7SKP3-201ENST00000411409 EPRSP07814 1512 aaKnown RBP14.95□□□□□ -0.02
RN7SKP3-201ENST00000411409 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
RN7SKP3-201ENST00000411409 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
RN7SKP3-201ENST00000411409 MAP3K1Q13233 1512 aa14.93□□□□□ -0.02
RN7SKP3-201ENST00000411409 ASXL2Q76L83 1435 aa14.92□□□□□ -0.02
RN7SKP3-201ENST00000411409 KIF13AQ9H1H9 1805 aa14.92□□□□□ -0.02
RN7SKP3-201ENST00000411409 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
RN7SKP3-201ENST00000411409 WDR7Q9Y4E6 1490 aa14.92□□□□□ -0.02
RN7SKP3-201ENST00000411409 PCF11O94913 1555 aaKnown RBP14.92□□□□□ -0.02
RN7SKP3-201ENST00000411409 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
RN7SKP3-201ENST00000411409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
RN7SKP3-201ENST00000411409 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
RN7SKP3-201ENST00000411409 ATP1B4Q9UN42 357 aaPredicted RBP14.89□□□□□ -0.03
RN7SKP3-201ENST00000411409 GLI2P10070 1586 aa14.89□□□□□ -0.03
RN7SKP3-201ENST00000411409 APLP2Q06481 763 aa14.88□□□□□ -0.03
RN7SKP3-201ENST00000411409 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
RN7SKP3-201ENST00000411409 TROQ12816 1431 aaPredicted RBP14.85□□□□□ -0.03
RN7SKP3-201ENST00000411409 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
RN7SKP3-201ENST00000411409 DIP2BQ9P265 1576 aa14.84□□□□□ -0.03
RN7SKP3-201ENST00000411409 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
RN7SKP3-201ENST00000411409 TIAM1Q13009 1591 aa14.81□□□□□ -0.04
RN7SKP3-201ENST00000411409 LRRIQ1Q96JM4 1722 aa14.8□□□□□ -0.04
RN7SKP3-201ENST00000411409 MTUS2Q5JR59 1369 aa14.8□□□□□ -0.04
RN7SKP3-201ENST00000411409 CFAP43Q8NDM7 1665 aa14.8□□□□□ -0.04
RN7SKP3-201ENST00000411409 ARID3CA6NKF2 412 aa14.79□□□□□ -0.04
RN7SKP3-201ENST00000411409 PHLDB1Q86UU1 1377 aa14.79□□□□□ -0.04
RN7SKP3-201ENST00000411409 EHBP1L1Q8N3D4 1523 aa14.79□□□□□ -0.04
RN7SKP3-201ENST00000411409 KDM6BO15054 1643 aa14.78□□□□□ -0.04
RN7SKP3-201ENST00000411409 ABCA9Q8IUA7 1624 aa14.78□□□□□ -0.04
RN7SKP3-201ENST00000411409 KCNH8Q96L42 1107 aa14.78□□□□□ -0.04
RN7SKP3-201ENST00000411409 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
RN7SKP3-201ENST00000411409 KIF14Q15058 1648 aa14.77□□□□□ -0.04
RN7SKP3-201ENST00000411409 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
RN7SKP3-201ENST00000411409 ARAP3Q8WWN8 1544 aa14.76□□□□□ -0.05
RN7SKP3-201ENST00000411409 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
RN7SKP3-201ENST00000411409 TEX14Q8IWB6 1497 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms