RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
RN7SKP228-201ENST00000411042 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
RN7SKP228-201ENST00000411042 TDRD9Q8NDG6 1382 aaKnown RBP16.54■□□□□ 0.24
RN7SKP228-201ENST00000411042 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
RN7SKP228-201ENST00000411042 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
RN7SKP228-201ENST00000411042 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
RN7SKP228-201ENST00000411042 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
RN7SKP228-201ENST00000411042 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
RN7SKP228-201ENST00000411042 EFCAB5A4FU69 1503 aa16.45■□□□□ 0.22
RN7SKP228-201ENST00000411042 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
RN7SKP228-201ENST00000411042 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
RN7SKP228-201ENST00000411042 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
RN7SKP228-201ENST00000411042 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
RN7SKP228-201ENST00000411042 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
RN7SKP228-201ENST00000411042 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
RN7SKP228-201ENST00000411042 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
RN7SKP228-201ENST00000411042 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
RN7SKP228-201ENST00000411042 MAP3K1Q13233 1512 aa16.38■□□□□ 0.21
RN7SKP228-201ENST00000411042 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
RN7SKP228-201ENST00000411042 APLP2Q06481 763 aa16.37■□□□□ 0.21
RN7SKP228-201ENST00000411042 SAMD9Q5K651 1589 aa16.31■□□□□ 0.2
RN7SKP228-201ENST00000411042 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
RN7SKP228-201ENST00000411042 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
RN7SKP228-201ENST00000411042 KIAA0586Q9BVV6 1533 aa16.29■□□□□ 0.2
RN7SKP228-201ENST00000411042 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
RN7SKP228-201ENST00000411042 IQGAP2Q13576 1575 aa16.29■□□□□ 0.2
RN7SKP228-201ENST00000411042 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
RN7SKP228-201ENST00000411042 UGGT2Q9NYU1 1516 aa16.27■□□□□ 0.2
RN7SKP228-201ENST00000411042 ZBTB22O15209 634 aa16.26■□□□□ 0.19
RN7SKP228-201ENST00000411042 MSH5O43196 834 aa16.26■□□□□ 0.19
RN7SKP228-201ENST00000411042 FYCO1Q9BQS8 1478 aa16.25■□□□□ 0.19
RN7SKP228-201ENST00000411042 CASKIN1Q8WXD9 1431 aa16.24■□□□□ 0.19
RN7SKP228-201ENST00000411042 RANGAP1P46060 587 aaPredicted RBP16.23■□□□□ 0.19
RN7SKP228-201ENST00000411042 NUP160Q12769 1436 aa16.22■□□□□ 0.19
RN7SKP228-201ENST00000411042 CHMP7Q8WUX9 453 aaPredicted RBP16.2■□□□□ 0.18
RN7SKP228-201ENST00000411042 TIAM1Q13009 1591 aa16.18■□□□□ 0.18
RN7SKP228-201ENST00000411042 FHOD3Q2V2M9 1422 aa16.18■□□□□ 0.18
RN7SKP228-201ENST00000411042 CFAP43Q8NDM7 1665 aa16.14■□□□□ 0.18
RN7SKP228-201ENST00000411042 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
RN7SKP228-201ENST00000411042 PPARGC1BQ86YN6 1023 aaKnown RBP16.13■□□□□ 0.17
RN7SKP228-201ENST00000411042 LRRC9Q6ZRR7 1453 aa16.12■□□□□ 0.17
RN7SKP228-201ENST00000411042 HRCP23327 699 aa16.12■□□□□ 0.17
RN7SKP228-201ENST00000411042 CEP170Q5SW79 1584 aa16.12■□□□□ 0.17
RN7SKP228-201ENST00000411042 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
RN7SKP228-201ENST00000411042 RRBP1Q9P2E9 1410 aaKnown RBP16.1■□□□□ 0.17
RN7SKP228-201ENST00000411042 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
RN7SKP228-201ENST00000411042 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
RN7SKP228-201ENST00000411042 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
RN7SKP228-201ENST00000411042 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
RN7SKP228-201ENST00000411042 CARMIL2Q6F5E8 1435 aa16.09■□□□□ 0.17
RN7SKP228-201ENST00000411042 P3H3Q8IVL6 736 aa16.08■□□□□ 0.16
RN7SKP228-201ENST00000411042 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
RN7SKP228-201ENST00000411042 HECW1Q76N89 1606 aa16.05■□□□□ 0.16
RN7SKP228-201ENST00000411042 JPH4Q96JJ6 628 aa16.05■□□□□ 0.16
RN7SKP228-201ENST00000411042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.03■□□□□ 0.16
RN7SKP228-201ENST00000411042 FBLN2P98095 1184 aa16.01■□□□□ 0.15
RN7SKP228-201ENST00000411042 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
RN7SKP228-201ENST00000411042 CHD1O14646 1710 aa15.99■□□□□ 0.15
RN7SKP228-201ENST00000411042 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
RN7SKP228-201ENST00000411042 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
RN7SKP228-201ENST00000411042 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
RN7SKP228-201ENST00000411042 EPRSP07814 1512 aaKnown RBP15.97■□□□□ 0.15
RN7SKP228-201ENST00000411042 MTUS2Q5JR59 1369 aa15.96■□□□□ 0.15
RN7SKP228-201ENST00000411042 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
RN7SKP228-201ENST00000411042 LRRIQ1Q96JM4 1722 aa15.94■□□□□ 0.14
RN7SKP228-201ENST00000411042 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
RN7SKP228-201ENST00000411042 ATP1B4Q9UN42 357 aaPredicted RBP15.93■□□□□ 0.14
RN7SKP228-201ENST00000411042 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
RN7SKP228-201ENST00000411042 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
RN7SKP228-201ENST00000411042 SUPT6HQ7KZ85 1726 aaKnown RBP15.92■□□□□ 0.14
RN7SKP228-201ENST00000411042 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
RN7SKP228-201ENST00000411042 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
RN7SKP228-201ENST00000411042 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
RN7SKP228-201ENST00000411042 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
RN7SKP228-201ENST00000411042 CLASP1Q7Z460 1538 aa15.9■□□□□ 0.14
RN7SKP228-201ENST00000411042 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
RN7SKP228-201ENST00000411042 ABCA8O94911 1581 aa15.88■□□□□ 0.13
RN7SKP228-201ENST00000411042 NCOA2Q15596 1464 aa15.87■□□□□ 0.13
RN7SKP228-201ENST00000411042 MYOM3Q5VTT5 1437 aa15.86■□□□□ 0.13
RN7SKP228-201ENST00000411042 PTPRGP23470 1445 aa15.85■□□□□ 0.13
RN7SKP228-201ENST00000411042 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
RN7SKP228-201ENST00000411042 MIA2Q96PC5 1412 aa15.85■□□□□ 0.13
RN7SKP228-201ENST00000411042 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
RN7SKP228-201ENST00000411042 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.12
RN7SKP228-201ENST00000411042 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
RN7SKP228-201ENST00000411042 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
RN7SKP228-201ENST00000411042 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
RN7SKP228-201ENST00000411042 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
RN7SKP228-201ENST00000411042 TCOF1Q13428 1488 aaKnown RBP15.8■□□□□ 0.12
RN7SKP228-201ENST00000411042 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
RN7SKP228-201ENST00000411042 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
RN7SKP228-201ENST00000411042 UACAQ9BZF9 1416 aa15.78■□□□□ 0.12
RN7SKP228-201ENST00000411042 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
RN7SKP228-201ENST00000411042 UHRF1BP1LA0JNW5 1464 aa15.78■□□□□ 0.12
RN7SKP228-201ENST00000411042 ATP10BO94823 1461 aa15.76■□□□□ 0.11
RN7SKP228-201ENST00000411042 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
RN7SKP228-201ENST00000411042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
RN7SKP228-201ENST00000411042 ABCC2Q92887 1545 aa15.73■□□□□ 0.11
RN7SKP228-201ENST00000411042 PTPN23Q9H3S7 1636 aa15.73■□□□□ 0.11
RN7SKP228-201ENST00000411042 AKNAQ7Z591 1439 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms