RNA–Protein interactions for RNA: ENST00000408945.4

HMSD-201, Transcript of histocompatibility minor serpin domain containing, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HMSD, Length 2,101 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMSD-201ENST00000408945 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
HMSD-201ENST00000408945 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
HMSD-201ENST00000408945 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
HMSD-201ENST00000408945 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
HMSD-201ENST00000408945 CLSPNQ9HAW4 1339 aa12.58□□□□□ -0.4
HMSD-201ENST00000408945 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
HMSD-201ENST00000408945 CUL7Q14999 1698 aa12.57□□□□□ -0.4
HMSD-201ENST00000408945 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
HMSD-201ENST00000408945 IGF1RP08069 1367 aa12.56□□□□□ -0.4
HMSD-201ENST00000408945 RUSC2Q8N2Y8 1516 aa12.55□□□□□ -0.4
HMSD-201ENST00000408945 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
HMSD-201ENST00000408945 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
HMSD-201ENST00000408945 KIF21BO75037 1637 aa12.54□□□□□ -0.4
HMSD-201ENST00000408945 AQRO60306 1485 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMSD-201ENST00000408945 MAGI1Q96QZ7 1491 aaPredicted RBP12.54□□□□□ -0.4
HMSD-201ENST00000408945 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
HMSD-201ENST00000408945 CARMIL1Q5VZK9 1371 aa12.52□□□□□ -0.41
HMSD-201ENST00000408945 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
HMSD-201ENST00000408945 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
HMSD-201ENST00000408945 RAPGEF2Q9Y4G8 1499 aa12.5□□□□□ -0.41
HMSD-201ENST00000408945 ERICH6BQ5W0A0 696 aa12.5□□□□□ -0.41
HMSD-201ENST00000408945 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
HMSD-201ENST00000408945 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
HMSD-201ENST00000408945 ADAMTS12P58397 1594 aa12.48□□□□□ -0.41
HMSD-201ENST00000408945 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
HMSD-201ENST00000408945 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
HMSD-201ENST00000408945 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
HMSD-201ENST00000408945 PKNOX2Q96KN3 472 aa12.45□□□□□ -0.42
HMSD-201ENST00000408945 SALL2Q9Y467 1007 aaPredicted RBP12.43□□□□□ -0.42
HMSD-201ENST00000408945 PODXL2Q9NZ53 605 aa12.43□□□□□ -0.42
HMSD-201ENST00000408945 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
HMSD-201ENST00000408945 TNIKQ9UKE5 1360 aa12.41□□□□□ -0.42
HMSD-201ENST00000408945 GRIN2AQ12879 1464 aa12.41□□□□□ -0.42
HMSD-201ENST00000408945 SUPT16HQ9Y5B9 1047 aaKnown RBP12.4□□□□□ -0.42
HMSD-201ENST00000408945 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
HMSD-201ENST00000408945 ADRA2BP18089 450 aa12.38□□□□□ -0.43
HMSD-201ENST00000408945 YTHDC1Q96MU7 727 aaKnown RBP12.38□□□□□ -0.43
HMSD-201ENST00000408945 KCNA4P22459 653 aa12.36□□□□□ -0.43
HMSD-201ENST00000408945 NUP160Q12769 1436 aa12.35□□□□□ -0.43
HMSD-201ENST00000408945 LOC105371045A0A1W2PR82 267 aa12.34□□□□□ -0.43
HMSD-201ENST00000408945 CTTNBP2Q8WZ74 1663 aa12.34□□□□□ -0.43
HMSD-201ENST00000408945 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
HMSD-201ENST00000408945 FBLN2P98095 1184 aa12.33□□□□□ -0.44
HMSD-201ENST00000408945 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
HMSD-201ENST00000408945 CHD1O14646 1710 aa12.32□□□□□ -0.44
HMSD-201ENST00000408945 IQGAP2Q13576 1575 aa12.3□□□□□ -0.44
HMSD-201ENST00000408945 EFCAB5A4FU69 1503 aa12.28□□□□□ -0.44
HMSD-201ENST00000408945 CEP170Q5SW79 1584 aa12.28□□□□□ -0.44
HMSD-201ENST00000408945 DEKP35659 375 aaKnown RBP12.28□□□□□ -0.44
HMSD-201ENST00000408945 CEP162Q5TB80 1403 aa12.27□□□□□ -0.44
HMSD-201ENST00000408945 CLIP1P30622 1438 aa12.26□□□□□ -0.45
HMSD-201ENST00000408945 UGGT2Q9NYU1 1516 aa12.26□□□□□ -0.45
HMSD-201ENST00000408945 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
HMSD-201ENST00000408945 CLASP1Q7Z460 1538 aa12.23□□□□□ -0.45
HMSD-201ENST00000408945 CARMIL2Q6F5E8 1435 aa12.22□□□□□ -0.45
HMSD-201ENST00000408945 RBM19Q9Y4C8 960 aaKnown RBP12.21□□□□□ -0.45
HMSD-201ENST00000408945 SAMD9Q5K651 1589 aa12.21□□□□□ -0.46
HMSD-201ENST00000408945 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
HMSD-201ENST00000408945 SHROOM2Q13796 1616 aa12.2□□□□□ -0.46
HMSD-201ENST00000408945 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
HMSD-201ENST00000408945 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
HMSD-201ENST00000408945 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
HMSD-201ENST00000408945 KIAA0556O60303 1618 aa12.16□□□□□ -0.46
HMSD-201ENST00000408945 FMN1Q68DA7 1419 aa12.16□□□□□ -0.46
HMSD-201ENST00000408945 MSH5O43196 834 aa12.16□□□□□ -0.46
HMSD-201ENST00000408945 DISP1Q96F81 1524 aa12.14□□□□□ -0.47
HMSD-201ENST00000408945 NEFLP07196 543 aa12.14□□□□□ -0.47
HMSD-201ENST00000408945 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
HMSD-201ENST00000408945 PRG4Q92954 1404 aaPredicted RBP12.14□□□□□ -0.47
HMSD-201ENST00000408945 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
HMSD-201ENST00000408945 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
HMSD-201ENST00000408945 MIER1Q8N108 512 aa12.13□□□□□ -0.47
HMSD-201ENST00000408945 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
HMSD-201ENST00000408945 RANGAP1P46060 587 aaPredicted RBP12.12□□□□□ -0.47
HMSD-201ENST00000408945 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
HMSD-201ENST00000408945 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
HMSD-201ENST00000408945 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
HMSD-201ENST00000408945 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
HMSD-201ENST00000408945 PTPRGP23470 1445 aa12.07□□□□□ -0.48
HMSD-201ENST00000408945 CASKIN1Q8WXD9 1431 aa12.07□□□□□ -0.48
HMSD-201ENST00000408945 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
HMSD-201ENST00000408945 GLIPR1L2Q4G1C9 344 aa12.05□□□□□ -0.48
HMSD-201ENST00000408945 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
HMSD-201ENST00000408945 HECW1Q76N89 1606 aa12.04□□□□□ -0.48
HMSD-201ENST00000408945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
HMSD-201ENST00000408945 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
HMSD-201ENST00000408945 RAPGEF6Q8TEU7 1601 aa12.02□□□□□ -0.49
HMSD-201ENST00000408945 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
HMSD-201ENST00000408945 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
HMSD-201ENST00000408945 ABCA8O94911 1581 aa12.01□□□□□ -0.49
HMSD-201ENST00000408945 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
HMSD-201ENST00000408945 ARHGEF11O15085 1522 aa12□□□□□ -0.49
HMSD-201ENST00000408945 ERCC6L2Q5T890 1561 aa12□□□□□ -0.49
HMSD-201ENST00000408945 ABCC2Q92887 1545 aa11.98□□□□□ -0.49
HMSD-201ENST00000408945 IL27Q8NEV9 243 aa11.98□□□□□ -0.49
HMSD-201ENST00000408945 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
HMSD-201ENST00000408945 PDE4CQ08493 712 aa11.96□□□□□ -0.5
HMSD-201ENST00000408945 PLB1Q6P1J6 1458 aa11.95□□□□□ -0.5
HMSD-201ENST00000408945 EPRSP07814 1512 aaKnown RBP11.95□□□□□ -0.5
HMSD-201ENST00000408945 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms